RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ZNF142P52746 1687 aaPredicted RBP14.11□□□□□ -0.15
CHD6-208ENST00000480022 SETD1BQ9UPS6 1966 aaKnown RBP14.1□□□□□ -0.15
CHD6-208ENST00000480022 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
CHD6-208ENST00000480022 L3MBTL2Q969R5 705 aa14.1□□□□□ -0.15
CHD6-208ENST00000480022 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
CHD6-208ENST00000480022 KIF1BO60333 1816 aa14.1□□□□□ -0.15
CHD6-208ENST00000480022 KDM5AP29375 1690 aaKnown RBP14.1□□□□□ -0.15
CHD6-208ENST00000480022 POGKQ9P215 609 aa14.1□□□□□ -0.15
CHD6-208ENST00000480022 LMTK3Q96Q04 1460 aa14.09□□□□□ -0.15
CHD6-208ENST00000480022 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
CHD6-208ENST00000480022 FGD1P98174 961 aa14.09□□□□□ -0.15
CHD6-208ENST00000480022 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.15
CHD6-208ENST00000480022 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
CHD6-208ENST00000480022 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
CHD6-208ENST00000480022 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
CHD6-208ENST00000480022 NUTM2DQ5VT03 806 aaPredicted RBP14.07□□□□□ -0.16
CHD6-208ENST00000480022 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 SLIT1O75093 1534 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 NEXMIFQ5QGS0 1516 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 HSPA2P54652 639 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
CHD6-208ENST00000480022 FAM161AQ3B820 660 aa14.06□□□□□ -0.16
CHD6-208ENST00000480022 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
CHD6-208ENST00000480022 LTKP29376 864 aa14.05□□□□□ -0.16
CHD6-208ENST00000480022 TXNDC2Q86VQ3 553 aa14.04□□□□□ -0.16
CHD6-208ENST00000480022 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHD6-208ENST00000480022 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
CHD6-208ENST00000480022 VGFO15240 615 aaPredicted RBP14.04□□□□□ -0.16
CHD6-208ENST00000480022 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
CHD6-208ENST00000480022 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CHD6-208ENST00000480022 EID1Q9Y6B2 187 aa14.03□□□□□ -0.16
CHD6-208ENST00000480022 LRPPRCP42704 1394 aaKnown RBP14.03□□□□□ -0.16
CHD6-208ENST00000480022 C8orf34Q49A92 452 aa14.02□□□□□ -0.16
CHD6-208ENST00000480022 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.16
CHD6-208ENST00000480022 STAC3Q96MF2 364 aa14.02□□□□□ -0.16
CHD6-208ENST00000480022 MYOM2P54296 1465 aa14.02□□□□□ -0.16
CHD6-208ENST00000480022 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
CHD6-208ENST00000480022 SCAF11Q99590 1463 aaKnown RBP14.01□□□□□ -0.17
CHD6-208ENST00000480022 PPLO60437 1756 aa14.01□□□□□ -0.17
CHD6-208ENST00000480022 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
CHD6-208ENST00000480022 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
CHD6-208ENST00000480022 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
CHD6-208ENST00000480022 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
CHD6-208ENST00000480022 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
CHD6-208ENST00000480022 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
CHD6-208ENST00000480022 NCKAP5LQ9HCH0 1330 aa14□□□□□ -0.17
CHD6-208ENST00000480022 CRBNQ96SW2 442 aa14□□□□□ -0.17
CHD6-208ENST00000480022 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
CHD6-208ENST00000480022 RBM10P98175 930 aaKnown RBP14□□□□□ -0.17
CHD6-208ENST00000480022 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
CHD6-208ENST00000480022 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
CHD6-208ENST00000480022 PDCL3Q9H2J4 239 aa13.99□□□□□ -0.17
CHD6-208ENST00000480022 PLEKHG1Q9ULL1 1385 aa13.99□□□□□ -0.17
CHD6-208ENST00000480022 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
CHD6-208ENST00000480022 GOLGA6L3A6NEY3 463 aa13.98□□□□□ -0.17
CHD6-208ENST00000480022 KDM2BQ8NHM5 1336 aa13.98□□□□□ -0.17
CHD6-208ENST00000480022 CALD1Q05682 793 aaKnown RBP13.98□□□□□ -0.17
CHD6-208ENST00000480022 CHMP4AQ9BY43 222 aa13.98□□□□□ -0.17
CHD6-208ENST00000480022 PLIN1O60240 522 aa13.97□□□□□ -0.17
CHD6-208ENST00000480022 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
CHD6-208ENST00000480022 A0A0U1RQG5 324 aaPredicted RBP13.96□□□□□ -0.17
CHD6-208ENST00000480022 KCNA4P22459 653 aa13.96□□□□□ -0.17
CHD6-208ENST00000480022 TPM2P07951 284 aa13.96□□□□□ -0.17
CHD6-208ENST00000480022 MED14O60244 1454 aa13.96□□□□□ -0.17
CHD6-208ENST00000480022 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
CHD6-208ENST00000480022 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
CHD6-208ENST00000480022 FSD2A1L4K1 749 aa13.95□□□□□ -0.18
CHD6-208ENST00000480022 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
CHD6-208ENST00000480022 POLR3GLQ9BT43 218 aa13.95□□□□□ -0.18
CHD6-208ENST00000480022 AAMPQ13685 434 aa13.95□□□□□ -0.18
CHD6-208ENST00000480022 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
CHD6-208ENST00000480022 SETBP1Q9Y6X0 1596 aa13.94□□□□□ -0.18
CHD6-208ENST00000480022 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
CHD6-208ENST00000480022 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
CHD6-208ENST00000480022 PANK2Q9BZ23 570 aa13.93□□□□□ -0.18
CHD6-208ENST00000480022 PRDM4Q9UKN5 801 aa13.93□□□□□ -0.18
CHD6-208ENST00000480022 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
CHD6-208ENST00000480022 BECN1Q14457 450 aa13.93□□□□□ -0.18
CHD6-208ENST00000480022 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
CHD6-208ENST00000480022 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
CHD6-208ENST00000480022 STRCQ7RTU9 1775 aa13.92□□□□□ -0.18
CHD6-208ENST00000480022 ALKQ9UM73 1620 aa13.92□□□□□ -0.18
CHD6-208ENST00000480022 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
CHD6-208ENST00000480022 MYBBP1AQ9BQG0 1328 aaKnown RBP13.91□□□□□ -0.18
CHD6-208ENST00000480022 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
CHD6-208ENST00000480022 ESPNB1AK53 854 aa13.91□□□□□ -0.18
CHD6-208ENST00000480022 TBX22Q9Y458 520 aa13.91□□□□□ -0.18
CHD6-208ENST00000480022 TMEM132EQ6IEE7 984 aa13.9□□□□□ -0.18
CHD6-208ENST00000480022 SLKQ9H2G2 1235 aaPredicted RBP13.9□□□□□ -0.18
CHD6-208ENST00000480022 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
CHD6-208ENST00000480022 METP08581 1390 aa13.9□□□□□ -0.18
CHD6-208ENST00000480022 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
CHD6-208ENST00000480022 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
CHD6-208ENST00000480022 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
CHD6-208ENST00000480022 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
CHD6-208ENST00000480022 MRE11P49959 708 aa13.89□□□□□ -0.19
CHD6-208ENST00000480022 ASXL1Q8IXJ9 1541 aa13.88□□□□□ -0.19
CHD6-208ENST00000480022 ADGRB1O14514 1584 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms