RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 PIK3R4Q99570 1358 aa15.27■□□□□ 0.04
CDK11A-216ENST00000479362 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.04
CDK11A-216ENST00000479362 E9PCH4 1651 aa15.27■□□□□ 0.03
CDK11A-216ENST00000479362 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.03
CDK11A-216ENST00000479362 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
CDK11A-216ENST00000479362 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
CDK11A-216ENST00000479362 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
CDK11A-216ENST00000479362 BRWD3Q6RI45 1802 aa15.25■□□□□ 0.03
CDK11A-216ENST00000479362 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
CDK11A-216ENST00000479362 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
CDK11A-216ENST00000479362 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
CDK11A-216ENST00000479362 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
CDK11A-216ENST00000479362 MARF1Q9Y4F3 1742 aaKnown RBP15.23■□□□□ 0.03
CDK11A-216ENST00000479362 ZBTB22O15209 634 aa15.23■□□□□ 0.03
CDK11A-216ENST00000479362 COL22A1Q8NFW1 1626 aaPredicted RBP15.23■□□□□ 0.03
CDK11A-216ENST00000479362 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
CDK11A-216ENST00000479362 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
CDK11A-216ENST00000479362 AMOTL2Q9Y2J4 779 aa15.21■□□□□ 0.03
CDK11A-216ENST00000479362 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
CDK11A-216ENST00000479362 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
CDK11A-216ENST00000479362 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
CDK11A-216ENST00000479362 GLI3P10071 1580 aa15.19■□□□□ 0.02
CDK11A-216ENST00000479362 PSDA5PKW4 1024 aaPredicted RBP15.19■□□□□ 0.02
CDK11A-216ENST00000479362 NRXN3Q9Y4C0 1643 aa15.18■□□□□ 0.02
CDK11A-216ENST00000479362 HDGFP51858 240 aaKnown RBP15.18■□□□□ 0.02
CDK11A-216ENST00000479362 MYOM2P54296 1465 aa15.18■□□□□ 0.02
CDK11A-216ENST00000479362 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
CDK11A-216ENST00000479362 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
CDK11A-216ENST00000479362 YY1P25490 414 aa15.16■□□□□ 0.02
CDK11A-216ENST00000479362 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK11A-216ENST00000479362 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
CDK11A-216ENST00000479362 C1orf167Q5SNV9 1468 aa15.15■□□□□ 0.02
CDK11A-216ENST00000479362 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
CDK11A-216ENST00000479362 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
CDK11A-216ENST00000479362 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
CDK11A-216ENST00000479362 CLTCL1P53675 1640 aa15.13■□□□□ 0.01
CDK11A-216ENST00000479362 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
CDK11A-216ENST00000479362 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
CDK11A-216ENST00000479362 KIF1BO60333 1816 aa15.1■□□□□ 0.01
CDK11A-216ENST00000479362 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
CDK11A-216ENST00000479362 SLIT2O94813 1529 aa15.08■□□□□ 0.01
CDK11A-216ENST00000479362 METP08581 1390 aa15.08■□□□□ 0
CDK11A-216ENST00000479362 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
CDK11A-216ENST00000479362 ORAI2Q96SN7 254 aa15.07■□□□□ 0
CDK11A-216ENST00000479362 UTRNP46939 3433 aa15.07■□□□□ 0
CDK11A-216ENST00000479362 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
CDK11A-216ENST00000479362 PXDNQ92626 1479 aa15.05■□□□□ -0
CDK11A-216ENST00000479362 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
CDK11A-216ENST00000479362 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
CDK11A-216ENST00000479362 SEPT12Q8IYM1 358 aa15.04■□□□□ -0
CDK11A-216ENST00000479362 NEUROD1Q13562 356 aa15.03■□□□□ -0
CDK11A-216ENST00000479362 CEP350Q5VT06 3117 aa15.03■□□□□ -0
CDK11A-216ENST00000479362 RGPD1P0DJD0 1748 aa15.03■□□□□ -0
CDK11A-216ENST00000479362 BAG6P46379 1132 aa15.02■□□□□ -0
CDK11A-216ENST00000479362 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
CDK11A-216ENST00000479362 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
CDK11A-216ENST00000479362 TNS1Q9HBL0 1735 aaKnown RBP15□□□□□ -0.01
CDK11A-216ENST00000479362 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
CDK11A-216ENST00000479362 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
CDK11A-216ENST00000479362 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
CDK11A-216ENST00000479362 ONECUT3O60422 494 aaPredicted RBP14.99□□□□□ -0.01
CDK11A-216ENST00000479362 SPATA31E1Q6ZUB1 1445 aa14.99□□□□□ -0.01
CDK11A-216ENST00000479362 NWD2Q9ULI1 1742 aa14.98□□□□□ -0.01
CDK11A-216ENST00000479362 EN1Q05925 392 aaPredicted RBP14.98□□□□□ -0.01
CDK11A-216ENST00000479362 IFT172Q9UG01 1749 aa14.97□□□□□ -0.01
CDK11A-216ENST00000479362 DISP2A7MBM2 1401 aa14.97□□□□□ -0.01
CDK11A-216ENST00000479362 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
CDK11A-216ENST00000479362 NPHP3Q7Z494 1330 aa14.96□□□□□ -0.01
CDK11A-216ENST00000479362 PPLO60437 1756 aa14.96□□□□□ -0.01
CDK11A-216ENST00000479362 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.02
CDK11A-216ENST00000479362 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
CDK11A-216ENST00000479362 VPS72Q15906 364 aa14.95□□□□□ -0.02
CDK11A-216ENST00000479362 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
CDK11A-216ENST00000479362 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
CDK11A-216ENST00000479362 SENP3-EIF4A1A0A087X0R7 540 aa14.93□□□□□ -0.02
CDK11A-216ENST00000479362 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
CDK11A-216ENST00000479362 CDC42BPGQ6DT37 1551 aa14.93□□□□□ -0.02
CDK11A-216ENST00000479362 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
CDK11A-216ENST00000479362 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
CDK11A-216ENST00000479362 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
CDK11A-216ENST00000479362 ABCA3Q99758 1704 aa14.92□□□□□ -0.02
CDK11A-216ENST00000479362 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
CDK11A-216ENST00000479362 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
CDK11A-216ENST00000479362 RREB1Q92766 1687 aa14.9□□□□□ -0.02
CDK11A-216ENST00000479362 FOXO3O43524 673 aa14.9□□□□□ -0.02
CDK11A-216ENST00000479362 ZNF784Q8NCA9 323 aaPredicted RBP14.9□□□□□ -0.02
CDK11A-216ENST00000479362 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
CDK11A-216ENST00000479362 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
CDK11A-216ENST00000479362 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
CDK11A-216ENST00000479362 EZH2Q15910 746 aaKnown RBP14.89□□□□□ -0.03
CDK11A-216ENST00000479362 ESCO1Q5FWF5 840 aa14.89□□□□□ -0.03
CDK11A-216ENST00000479362 ADGRB2O60241 1585 aa14.89□□□□□ -0.03
CDK11A-216ENST00000479362 NINLQ9Y2I6 1382 aa14.88□□□□□ -0.03
CDK11A-216ENST00000479362 RPGRIP1LQ68CZ1 1315 aa14.88□□□□□ -0.03
CDK11A-216ENST00000479362 FAM182BQ5T319 152 aa14.87□□□□□ -0.03
CDK11A-216ENST00000479362 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
CDK11A-216ENST00000479362 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
CDK11A-216ENST00000479362 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
CDK11A-216ENST00000479362 CAMKK2Q96RR4 588 aa14.86□□□□□ -0.03
CDK11A-216ENST00000479362 THSD7AQ9UPZ6 1657 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms