RNA–Protein interactions for RNA: ENST00000479351.5

CNTNAP3B-206, Transcript of contactin associated protein like 3B, human

TSL 5

Gene CNTNAP3B, Length 2,426 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-206	ENST00000479351	PREX1	Q8TCU6	1659 aa		27.99	■■■□□ 2.07
CNTNAP3B-206	ENST00000479351	RIMBP3C	A6NJZ7	1639 aa		27.97	■■■□□ 2.07
CNTNAP3B-206	ENST00000479351	RIMBP3B	A6NNM3	1639 aa		27.97	■■■□□ 2.07
CNTNAP3B-206	ENST00000479351	RIMBP3	Q9UFD9	1639 aa		27.97	■■■□□ 2.07
CNTNAP3B-206	ENST00000479351	SHPRH	Q149N8	1683 aa		27.95	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	EVC2	Q86UK5	1308 aa		27.94	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	TMEM131L	A2VDJ0	1609 aa		27.94	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	POLR3A	O14802	1390 aa	Predicted RBP	27.94	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	RRP7A	Q9Y3A4	280 aa	Known RBP	27.93	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	SLC52A1	Q9NWF4	448 aa		27.93	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	NEUROD2	Q15784	382 aa		27.92	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	TRMT2A	Q8IZ69	625 aa	Known RBP	27.92	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	DIP2B	Q9P265	1576 aa		27.92	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	MTHFS	P49914	203 aa		27.9	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.9	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	BCAR3	O75815	825 aa		27.89	■■■□□ 2.06
CNTNAP3B-206	ENST00000479351	ERICH6	Q7L0X2	663 aa		27.89	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	CGNL1	Q0VF96	1302 aa		27.88	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	MLEC	Q14165	292 aa		27.88	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	SRPK2	P78362	688 aa	Known RBP	27.87	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	PRAM1	Q96QH2	718 aa		27.87	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	ANKRD36B	Q8N2N9	1353 aa		27.86	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	NKTR	P30414	1462 aa	Known RBP	27.85	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	PTPRM	P28827	1452 aa		27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	ZFYVE9	O95405	1425 aa		27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	PAK3	O75914	559 aa	Predicted RBP	27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	WWC1	Q8IX03	1113 aa		27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351		A0A1W2PP64	1363 aa		27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351	USP32	Q8NFA0	1604 aa		27.84	■■■□□ 2.05
CNTNAP3B-206	ENST00000479351		E9PSI1	815 aa		27.82	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	STAG3	Q9UJ98	1225 aa		27.82	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	TCERG1	O14776	1098 aa	Known RBP	27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	GGNBP2	Q9H3C7	697 aa		27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	NPM2	Q86SE8	214 aa	Known RBP	27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	TCP11L2	Q8N4U5	519 aa		27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	CLTC	Q00610	1675 aa	Known RBP	27.8	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	POGK	Q9P215	609 aa		27.79	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	PDE4A	P27815	886 aa		27.78	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	RUNDC1	Q96C34	613 aa		27.77	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	IQSEC2	Q5JU85	1478 aa		27.76	■■■□□ 2.04
CNTNAP3B-206	ENST00000479351	ALK	Q9UM73	1620 aa		27.76	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	KDM2B	Q8NHM5	1336 aa		27.76	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	PUS7	Q96PZ0	661 aa	Known RBP	27.75	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	NOP58	Q9Y2X3	529 aa	Known RBP	27.75	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	ANP32A	P39687	249 aa	Known RBP	27.74	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.74	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.72	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	CD163L1	Q9NR16	1453 aa		27.72	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	CFAP53	Q96M91	514 aa		27.72	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	ABCC11	Q96J66	1382 aa		27.72	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	WAPL	Q7Z5K2	1190 aa		27.71	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	BACH2	Q9BYV9	841 aa		27.71	■■■□□ 2.03
CNTNAP3B-206	ENST00000479351	CDK19	Q9BWU1	502 aa		27.7	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	IPO9	Q96P70	1041 aa	Known RBP	27.69	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	NSD2	O96028	1365 aa		27.68	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	A2ML1	A8K2U0	1454 aa		27.68	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	FYB1	O15117	783 aa		27.68	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	PANK1	Q8TE04	598 aa		27.67	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	CABP1	Q9NZU7	370 aa		27.67	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	BCL2L13	Q9BXK5	485 aa		27.66	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	U2SURP	O15042	1029 aa	Known RBP	27.66	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	MS4A1	P11836	297 aa		27.66	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	FBLN1	P23142	703 aa		27.66	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	TNN	Q9UQP3	1299 aa		27.66	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	PHF23	Q9BUL5	403 aa	Predicted RBP	27.65	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	NGEF	Q8N5V2	710 aa		27.65	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	FRAT1	Q92837	279 aa	Predicted RBP	27.65	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	ATAD2	Q6PL18	1390 aa		27.64	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	AGL	P35573	1532 aa		27.64	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.64	■■■□□ 2.02
CNTNAP3B-206	ENST00000479351	RIMS2	Q9UQ26	1411 aa		27.64	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	ARHGEF40	Q8TER5	1519 aa		27.63	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	NLRP1	Q9C000	1473 aa		27.63	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	RERE	Q9P2R6	1566 aa		27.63	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	COG6	Q9Y2V7	657 aa		27.62	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	CANX	P27824	592 aa	Known RBP	27.62	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	TERF2IP	Q9NYB0	399 aa		27.62	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	SPATA31D1	Q6ZQQ2	1576 aa		27.61	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	NINL	Q9Y2I6	1382 aa		27.6	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	COL3A1	P02461	1466 aa	Predicted RBP	27.59	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	RARS	P54136	660 aa	Known RBP	27.59	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	IGHD	P01880	384 aa		27.58	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	RGS3	P49796	1198 aa		27.58	■■■□□ 2.01
CNTNAP3B-206	ENST00000479351	SETD1A	O15047	1707 aa	Known RBP	27.57	■■■□□ 2
CNTNAP3B-206	ENST00000479351	WDR63	Q8IWG1	891 aa		27.57	■■■□□ 2
CNTNAP3B-206	ENST00000479351	TSR2	Q969E8	191 aa	Known RBP	27.57	■■■□□ 2
CNTNAP3B-206	ENST00000479351	NBR1	Q14596	966 aa		27.56	■■■□□ 2
CNTNAP3B-206	ENST00000479351	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.56	■■■□□ 2
CNTNAP3B-206	ENST00000479351	ZBTB47	Q9UFB7	747 aa	Predicted RBP	27.56	■■■□□ 2
CNTNAP3B-206	ENST00000479351	ADGRB2	O60241	1585 aa		27.55	■■■□□ 2
CNTNAP3B-206	ENST00000479351	RLBP1	P12271	317 aa		27.55	■■■□□ 2
CNTNAP3B-206	ENST00000479351	PLEKHF1	Q96S99	279 aa		27.55	■■■□□ 2
CNTNAP3B-206	ENST00000479351	KIF13A	Q9H1H9	1805 aa		27.55	■■■□□ 2
CNTNAP3B-206	ENST00000479351	ANKRD26	Q9UPS8	1709 aa		27.55	■■■□□ 2
CNTNAP3B-206	ENST00000479351	MET	P08581	1390 aa		27.54	■■■□□ 2
CNTNAP3B-206	ENST00000479351	NCKAP5L	Q9HCH0	1330 aa		27.53	■■■□□ 2
CNTNAP3B-206	ENST00000479351	CCDC27	Q2M243	656 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms