RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 SAFB2Q14151 953 aaKnown RBP eCLIP26.21■■□□□ 1.79
RUNX3-204ENST00000479341 RBM33Q96EV2 1170 aaKnown RBP26.21■■□□□ 1.79
RUNX3-204ENST00000479341 NCOA3Q9Y6Q9 1424 aa26.21■■□□□ 1.79
RUNX3-204ENST00000479341 TMEM94Q12767 1356 aa26.2■■□□□ 1.79
RUNX3-204ENST00000479341 UBAP1LF5GYI3 381 aa26.2■■□□□ 1.78
RUNX3-204ENST00000479341 TESK2Q96S53 571 aa26.19■■□□□ 1.78
RUNX3-204ENST00000479341 SBNO2Q9Y2G9 1366 aa26.18■■□□□ 1.78
RUNX3-204ENST00000479341 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.17■■□□□ 1.78
RUNX3-204ENST00000479341 MINK1Q8N4C8 1332 aaPredicted RBP26.16■■□□□ 1.78
RUNX3-204ENST00000479341 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
RUNX3-204ENST00000479341 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
RUNX3-204ENST00000479341 XIRP1Q702N8 1843 aaKnown RBP26.14■■□□□ 1.77
RUNX3-204ENST00000479341 ADGRL3Q9HAR2 1447 aa26.14■■□□□ 1.77
RUNX3-204ENST00000479341 SLC24A1O60721 1099 aa26.11■■□□□ 1.77
RUNX3-204ENST00000479341 ILDR2Q71H61 639 aa26.11■■□□□ 1.77
RUNX3-204ENST00000479341 C14orf37Q86TY3 774 aa26.11■■□□□ 1.77
RUNX3-204ENST00000479341 C19orf44Q9H6X5 657 aa26.11■■□□□ 1.77
RUNX3-204ENST00000479341 ADGRB2O60241 1585 aa26.1■■□□□ 1.77
RUNX3-204ENST00000479341 NALCNQ8IZF0 1738 aa26.1■■□□□ 1.77
RUNX3-204ENST00000479341 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
RUNX3-204ENST00000479341 TULP4Q9NRJ4 1543 aa26.06■■□□□ 1.76
RUNX3-204ENST00000479341 EVC2Q86UK5 1308 aa26.06■■□□□ 1.76
RUNX3-204ENST00000479341 MSH6P52701 1360 aa26.06■■□□□ 1.76
RUNX3-204ENST00000479341 CDC42BPGQ6DT37 1551 aa26.05■■□□□ 1.76
RUNX3-204ENST00000479341 TMF1P82094 1093 aa26.05■■□□□ 1.76
RUNX3-204ENST00000479341 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
RUNX3-204ENST00000479341 DCCP43146 1447 aa26.05■■□□□ 1.76
RUNX3-204ENST00000479341 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
RUNX3-204ENST00000479341 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
RUNX3-204ENST00000479341 PUS7Q96PZ0 661 aaKnown RBP26.01■■□□□ 1.75
RUNX3-204ENST00000479341 ATF3P18847 181 aa26■■□□□ 1.75
RUNX3-204ENST00000479341 CADPS2Q86UW7 1296 aa26■■□□□ 1.75
RUNX3-204ENST00000479341 TOM1O60784 492 aa25.99■■□□□ 1.75
RUNX3-204ENST00000479341 PIP4K2BP78356 416 aa25.99■■□□□ 1.75
RUNX3-204ENST00000479341 CABP2Q9NPB3 220 aa25.99■■□□□ 1.75
RUNX3-204ENST00000479341 FMN2Q9NZ56 1722 aa25.98■■□□□ 1.75
RUNX3-204ENST00000479341 SOCS7O14512 581 aa25.98■■□□□ 1.75
RUNX3-204ENST00000479341 SRPK2P78362 688 aaKnown RBP25.98■■□□□ 1.75
RUNX3-204ENST00000479341 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
RUNX3-204ENST00000479341 PRR36Q9H6K5 1346 aa25.96■■□□□ 1.75
RUNX3-204ENST00000479341 ANKARQ7Z5J8 1434 aa25.96■■□□□ 1.75
RUNX3-204ENST00000479341 NUDT16Q96DE0 195 aaKnown RBP25.95■■□□□ 1.74
RUNX3-204ENST00000479341 MST1RQ04912 1400 aa25.95■■□□□ 1.74
RUNX3-204ENST00000479341 NUTM2FA1L443 756 aa25.94■■□□□ 1.74
RUNX3-204ENST00000479341 ATP7BP35670 1465 aa25.92■■□□□ 1.74
RUNX3-204ENST00000479341 KIF7Q2M1P5 1343 aa25.92■■□□□ 1.74
RUNX3-204ENST00000479341 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
RUNX3-204ENST00000479341 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
RUNX3-204ENST00000479341 C1orf167Q5SNV9 1468 aa25.91■■□□□ 1.74
RUNX3-204ENST00000479341 ZNF316A6NFI3 1004 aaPredicted RBP25.91■■□□□ 1.74
RUNX3-204ENST00000479341 SLAIN2Q9P270 581 aa25.91■■□□□ 1.74
RUNX3-204ENST00000479341 CCDC61Q9Y6R9 512 aa25.91■■□□□ 1.74
RUNX3-204ENST00000479341 CCDC7Q96M83 1385 aa25.91■■□□□ 1.74
RUNX3-204ENST00000479341 WASHC2AQ641Q2 1341 aa25.9■■□□□ 1.74
RUNX3-204ENST00000479341 HSPA1LP34931 641 aa25.9■■□□□ 1.74
RUNX3-204ENST00000479341 POLR3GLQ9BT43 218 aa25.86■■□□□ 1.73
RUNX3-204ENST00000479341 RGPD8O14715 1765 aaPredicted RBP25.86■■□□□ 1.73
RUNX3-204ENST00000479341 PLEKHG3A1L390 1219 aa25.85■■□□□ 1.73
RUNX3-204ENST00000479341 ORAI2Q96SN7 254 aa25.85■■□□□ 1.73
RUNX3-204ENST00000479341 TOPAZ1Q8N9V7 1692 aa25.84■■□□□ 1.73
RUNX3-204ENST00000479341 ESCO1Q5FWF5 840 aa25.84■■□□□ 1.73
RUNX3-204ENST00000479341 CABP1Q9NZU7 370 aa25.84■■□□□ 1.73
RUNX3-204ENST00000479341 PPIP5K1Q6PFW1 1433 aa25.83■■□□□ 1.73
RUNX3-204ENST00000479341 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
RUNX3-204ENST00000479341 NINLQ9Y2I6 1382 aa25.82■■□□□ 1.72
RUNX3-204ENST00000479341 TMC1Q8TDI8 760 aa25.82■■□□□ 1.72
RUNX3-204ENST00000479341 PHF8Q9UPP1 1060 aa25.82■■□□□ 1.72
RUNX3-204ENST00000479341 ITSN1Q15811 1721 aa25.8■■□□□ 1.72
RUNX3-204ENST00000479341 BRINP3Q76B58 766 aa25.8■■□□□ 1.72
RUNX3-204ENST00000479341 PMFBP1Q8TBY8 1022 aa25.79■■□□□ 1.72
RUNX3-204ENST00000479341 MYOM1P52179 1685 aa25.78■■□□□ 1.72
RUNX3-204ENST00000479341 POLR3AO14802 1390 aaPredicted RBP25.77■■□□□ 1.72
RUNX3-204ENST00000479341 ACEP12821 1306 aa25.76■■□□□ 1.71
RUNX3-204ENST00000479341 CD163L1Q9NR16 1453 aa25.75■■□□□ 1.71
RUNX3-204ENST00000479341 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
RUNX3-204ENST00000479341 CPSF1Q10570 1443 aaKnown RBP25.74■■□□□ 1.71
RUNX3-204ENST00000479341 NGDNQ8NEJ9 315 aaKnown RBP25.74■■□□□ 1.71
RUNX3-204ENST00000479341 TERF2IPQ9NYB0 399 aa25.73■■□□□ 1.71
RUNX3-204ENST00000479341 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
RUNX3-204ENST00000479341 FOXO3O43524 673 aa25.72■■□□□ 1.71
RUNX3-204ENST00000479341 ZNF692Q9BU19 519 aaPredicted RBP25.72■■□□□ 1.71
RUNX3-204ENST00000479341 HDGFL2Q7Z4V5 671 aaPredicted RBP25.71■■□□□ 1.71
RUNX3-204ENST00000479341 PANK3Q9H999 370 aa25.71■■□□□ 1.71
RUNX3-204ENST00000479341 ROBO1Q9Y6N7 1651 aa25.71■■□□□ 1.71
RUNX3-204ENST00000479341 A0A1W2PP64 1363 aa25.69■■□□□ 1.7
RUNX3-204ENST00000479341 NPHP3Q7Z494 1330 aa25.68■■□□□ 1.7
RUNX3-204ENST00000479341 DDX17Q92841 729 aaKnown RBP25.68■■□□□ 1.7
RUNX3-204ENST00000479341 CARD14Q9BXL6 1004 aa25.68■■□□□ 1.7
RUNX3-204ENST00000479341 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
RUNX3-204ENST00000479341 AKAP12Q02952 1782 aa25.67■■□□□ 1.7
RUNX3-204ENST00000479341 PSME1Q06323 249 aa25.67■■□□□ 1.7
RUNX3-204ENST00000479341 DDX10Q13206 875 aaKnown RBP25.67■■□□□ 1.7
RUNX3-204ENST00000479341 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
RUNX3-204ENST00000479341 USP6P35125 1406 aa25.66■■□□□ 1.7
RUNX3-204ENST00000479341 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
RUNX3-204ENST00000479341 SSH2Q76I76 1423 aa25.65■■□□□ 1.7
RUNX3-204ENST00000479341 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
RUNX3-204ENST00000479341 NHSL1Q5SYE7 1610 aa25.64■■□□□ 1.7
RUNX3-204ENST00000479341 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
RUNX3-204ENST00000479341 SOS2Q07890 1332 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms