RNA–Protein interactions for RNA: ENST00000478731.1

PSME4-207, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-207ENST00000478731 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
PSME4-207ENST00000478731 Q3C1V9 767 aa8.63□□□□□ -1.03
PSME4-207ENST00000478731 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
PSME4-207ENST00000478731 AXIN1O15169 862 aa8.62□□□□□ -1.03
PSME4-207ENST00000478731 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
PSME4-207ENST00000478731 CD46P15529 392 aa8.61□□□□□ -1.03
PSME4-207ENST00000478731 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
PSME4-207ENST00000478731 TTC24A2A3L6 582 aaPredicted RBP8.6□□□□□ -1.03
PSME4-207ENST00000478731 WNT7AO00755 349 aa8.59□□□□□ -1.03
PSME4-207ENST00000478731 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
PSME4-207ENST00000478731 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
PSME4-207ENST00000478731 MMP16P51512 607 aa8.58□□□□□ -1.04
PSME4-207ENST00000478731 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
PSME4-207ENST00000478731 TRIM32Q13049 653 aa8.58□□□□□ -1.04
PSME4-207ENST00000478731 GMPR2Q9P2T1 348 aaKnown RBP8.58□□□□□ -1.04
PSME4-207ENST00000478731 C11orf95C9JLR9 678 aaPredicted RBP8.57□□□□□ -1.04
PSME4-207ENST00000478731 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
PSME4-207ENST00000478731 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
PSME4-207ENST00000478731 KDM4AO75164 1064 aa8.56□□□□□ -1.04
PSME4-207ENST00000478731 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
PSME4-207ENST00000478731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.56□□□□□ -1.04
PSME4-207ENST00000478731 SNIP1Q8TAD8 396 aaKnown RBP8.56□□□□□ -1.04
PSME4-207ENST00000478731 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
PSME4-207ENST00000478731 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
PSME4-207ENST00000478731 SMPD1P17405 629 aa8.54□□□□□ -1.04
PSME4-207ENST00000478731 CLCN1P35523 988 aa8.54□□□□□ -1.04
PSME4-207ENST00000478731 USP46P62068 366 aa8.54□□□□□ -1.04
PSME4-207ENST00000478731 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
PSME4-207ENST00000478731 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
PSME4-207ENST00000478731 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
PSME4-207ENST00000478731 WFS1O76024 890 aa8.52□□□□□ -1.05
PSME4-207ENST00000478731 FAM217BQ9NTX9 383 aaPredicted RBP8.51□□□□□ -1.05
PSME4-207ENST00000478731 HOXA2O43364 376 aa8.5□□□□□ -1.05
PSME4-207ENST00000478731 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
PSME4-207ENST00000478731 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
PSME4-207ENST00000478731 ATP13A2Q9NQ11 1180 aa8.5□□□□□ -1.05
PSME4-207ENST00000478731 J3QL48 77 aa8.49□□□□□ -1.05
PSME4-207ENST00000478731 HLA-CQ95604 372 aa8.49□□□□□ -1.05
PSME4-207ENST00000478731 SENP2Q9HC62 589 aa8.49□□□□□ -1.05
PSME4-207ENST00000478731 WNT7BP56706 349 aa8.48□□□□□ -1.05
PSME4-207ENST00000478731 NFX1Q12986 1120 aaKnown RBP8.47□□□□□ -1.05
PSME4-207ENST00000478731 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
PSME4-207ENST00000478731 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
PSME4-207ENST00000478731 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
PSME4-207ENST00000478731 JUNDP17535 347 aa8.46□□□□□ -1.06
PSME4-207ENST00000478731 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
PSME4-207ENST00000478731 HPS1Q92902 700 aa8.46□□□□□ -1.06
PSME4-207ENST00000478731 ZMYND10O75800 440 aa8.45□□□□□ -1.06
PSME4-207ENST00000478731 SNRPBP14678 240 aaKnown RBP8.45□□□□□ -1.06
PSME4-207ENST00000478731 SKOR1P84550 965 aa8.45□□□□□ -1.06
PSME4-207ENST00000478731 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
PSME4-207ENST00000478731 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
PSME4-207ENST00000478731 WIPF1O43516 503 aa8.43□□□□□ -1.06
PSME4-207ENST00000478731 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
PSME4-207ENST00000478731 INSM1Q01101 510 aaPredicted RBP8.43□□□□□ -1.06
PSME4-207ENST00000478731 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
PSME4-207ENST00000478731 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
PSME4-207ENST00000478731 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
PSME4-207ENST00000478731 NUDT12Q9BQG2 462 aa8.42□□□□□ -1.06
PSME4-207ENST00000478731 STK17AQ9UEE5 414 aa8.42□□□□□ -1.06
PSME4-207ENST00000478731 TERTO14746 1132 aaKnown RBP8.41□□□□□ -1.06
PSME4-207ENST00000478731 FDX1P10109 184 aa8.41□□□□□ -1.06
PSME4-207ENST00000478731 TTLL12Q14166 644 aaPredicted RBP8.41□□□□□ -1.06
PSME4-207ENST00000478731 AMHR2Q16671 573 aa8.41□□□□□ -1.06
PSME4-207ENST00000478731 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
PSME4-207ENST00000478731 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
PSME4-207ENST00000478731 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
PSME4-207ENST00000478731 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
PSME4-207ENST00000478731 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
PSME4-207ENST00000478731 CCNYL3P0C7X3 344 aa8.37□□□□□ -1.07
PSME4-207ENST00000478731 MS4A1P11836 297 aa8.37□□□□□ -1.07
PSME4-207ENST00000478731 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
PSME4-207ENST00000478731 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
PSME4-207ENST00000478731 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
PSME4-207ENST00000478731 MOXD2PA6NHM9 499 aa8.35□□□□□ -1.07
PSME4-207ENST00000478731 SIAH2O43255 324 aa8.35□□□□□ -1.07
PSME4-207ENST00000478731 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
PSME4-207ENST00000478731 CAPN5O15484 640 aaPredicted RBP8.34□□□□□ -1.07
PSME4-207ENST00000478731 BMP1P13497 986 aa8.34□□□□□ -1.07
PSME4-207ENST00000478731 NDUFV2P19404 249 aa8.34□□□□□ -1.07
PSME4-207ENST00000478731 PTPRNQ16849 979 aa8.34□□□□□ -1.07
PSME4-207ENST00000478731 SLC16A10Q8TF71 515 aa8.34□□□□□ -1.07
PSME4-207ENST00000478731 BEGAINQ9BUH8 593 aa8.33□□□□□ -1.08
PSME4-207ENST00000478731 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
PSME4-207ENST00000478731 SH3BP2P78314 561 aa8.32□□□□□ -1.08
PSME4-207ENST00000478731 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
PSME4-207ENST00000478731 AK7Q96M32 723 aa8.32□□□□□ -1.08
PSME4-207ENST00000478731 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
PSME4-207ENST00000478731 NXF1Q9UBU9 619 aaKnown RBP8.32□□□□□ -1.08
PSME4-207ENST00000478731 TRIM66O15016 1216 aa8.31□□□□□ -1.08
PSME4-207ENST00000478731 GJA5P36382 358 aa8.31□□□□□ -1.08
PSME4-207ENST00000478731 MTMR2Q13614 643 aa8.31□□□□□ -1.08
PSME4-207ENST00000478731 TRIM46Q7Z4K8 759 aa8.31□□□□□ -1.08
PSME4-207ENST00000478731 PARP9Q8IXQ6 854 aa8.31□□□□□ -1.08
PSME4-207ENST00000478731 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
PSME4-207ENST00000478731 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
PSME4-207ENST00000478731 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
PSME4-207ENST00000478731 TBC1D2Q9BYX2 928 aa8.3□□□□□ -1.08
PSME4-207ENST00000478731 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
PSME4-207ENST00000478731 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 319 ms