RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 HLA-CQ95604 372 aa5.66□□□□□ -1.5
GARNL3-214ENST00000478696 DDRGK1Q96HY6 314 aa5.66□□□□□ -1.5
GARNL3-214ENST00000478696 PPEF1O14829 653 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-214ENST00000478696 NDUFV2P19404 249 aa5.65□□□□□ -1.5
GARNL3-214ENST00000478696 SLC19A1P41440 591 aa5.65□□□□□ -1.5
GARNL3-214ENST00000478696 GUCA2AQ02747 115 aa5.65□□□□□ -1.5
GARNL3-214ENST00000478696 RETREG3Q86VR2 466 aa5.65□□□□□ -1.5
GARNL3-214ENST00000478696 FAM160A2Q8N612 972 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-214ENST00000478696 KDM4CQ9H3R0 1056 aa5.65□□□□□ -1.5
GARNL3-214ENST00000478696 MTMR2Q13614 643 aa5.64□□□□□ -1.51
GARNL3-214ENST00000478696 NEUROD2Q15784 382 aa5.64□□□□□ -1.51
GARNL3-214ENST00000478696 RIC3Q7Z5B4 369 aa5.64□□□□□ -1.51
GARNL3-214ENST00000478696 IRX2Q9BZI1 471 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-214ENST00000478696 FCF1Q9Y324 198 aaKnown RBP5.64□□□□□ -1.51
GARNL3-214ENST00000478696 NUTM2BA6NNL0 878 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 NUTM2EB1AL46 878 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 CD2BP2O95400 341 aaKnown RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 NUTM2DQ5VT03 806 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 RSBN1LQ6PCB5 846 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 NUTM2AQ8IVF1 878 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
GARNL3-214ENST00000478696 GPBP1L1Q9HC44 474 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-214ENST00000478696 SPTLC1O15269 473 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 MMP16P51512 607 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 LAPTM4AQ15012 233 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 CSPP1Q1MSJ5 1256 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 PRPF38BQ5VTL8 546 aaKnown RBP5.62□□□□□ -1.51
GARNL3-214ENST00000478696 MYSM1Q5VVJ2 828 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 CCDC24Q8N4L8 307 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 PRDM9Q9NQV7 894 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 PCDHGC3Q9UN70 934 aa5.62□□□□□ -1.51
GARNL3-214ENST00000478696 JUNDP17535 347 aa5.61□□□□□ -1.51
GARNL3-214ENST00000478696 RPIAP49247 311 aa5.61□□□□□ -1.51
GARNL3-214ENST00000478696 CLK2P49760 499 aaKnown RBP5.61□□□□□ -1.51
GARNL3-214ENST00000478696 SPRYD7Q5W111 196 aa5.61□□□□□ -1.51
GARNL3-214ENST00000478696 DXOO77932 396 aaKnown RBP5.6□□□□□ -1.51
GARNL3-214ENST00000478696 ZNF598Q86UK7 904 aaKnown RBP5.6□□□□□ -1.51
GARNL3-214ENST00000478696 PRR7Q8TB68 274 aa5.6□□□□□ -1.51
GARNL3-214ENST00000478696 FAM117AQ9C073 453 aa5.6□□□□□ -1.51
GARNL3-214ENST00000478696 POLR3EQ9NVU0 708 aa5.6□□□□□ -1.51
GARNL3-214ENST00000478696 GFRA3O60609 400 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 HRCP23327 699 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 SKIV2LQ15477 1246 aaKnown RBP5.59□□□□□ -1.51
GARNL3-214ENST00000478696 TUSC1Q2TAM9 212 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 ZNF697Q5TEC3 545 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 DESI1Q6ICB0 168 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 LIAT1Q6ZQX7 453 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 TSC1Q92574 1164 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 NUDT12Q9BQG2 462 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
GARNL3-214ENST00000478696 HELBQ8NG08 1087 aaPredicted RBP5.58□□□□□ -1.52
GARNL3-214ENST00000478696 PDZRN3Q9UPQ7 1066 aa5.58□□□□□ -1.52
GARNL3-214ENST00000478696 CCNYL3P0C7X3 344 aa5.57□□□□□ -1.52
GARNL3-214ENST00000478696 PTPRNQ16849 979 aa5.57□□□□□ -1.52
GARNL3-214ENST00000478696 SH3D19Q5HYK7 790 aa5.57□□□□□ -1.52
GARNL3-214ENST00000478696 PLA2G2CQ5R387 149 aa5.57□□□□□ -1.52
GARNL3-214ENST00000478696 LIMD1Q9UGP4 676 aa5.57□□□□□ -1.52
GARNL3-214ENST00000478696 NRG2O14511 850 aaPredicted RBP5.56□□□□□ -1.52
GARNL3-214ENST00000478696 IL27Q8NEV9 243 aa5.56□□□□□ -1.52
GARNL3-214ENST00000478696 CABLES1Q8TDN4 633 aa5.56□□□□□ -1.52
GARNL3-214ENST00000478696 PCMTD1Q96MG8 357 aaPredicted RBP5.56□□□□□ -1.52
GARNL3-214ENST00000478696 LILRB3O75022 631 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 CTHP32929 405 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 BRPF1P55201 1214 aaPredicted RBP5.55□□□□□ -1.52
GARNL3-214ENST00000478696 FOXC1Q12948 553 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 TRIM32Q13049 653 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 QPCTQ16769 361 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 Q6ZNB5 142 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 GOPCQ9HD26 462 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 EVA1BQ9NVM1 165 aa5.55□□□□□ -1.52
GARNL3-214ENST00000478696 CFAP99D6REC4 459 aa5.54□□□□□ -1.52
GARNL3-214ENST00000478696 KCNH2Q12809 1159 aa5.54□□□□□ -1.52
GARNL3-214ENST00000478696 LYPD8Q6UX82 237 aa5.54□□□□□ -1.52
GARNL3-214ENST00000478696 EMID1Q96A84 441 aaPredicted RBP5.54□□□□□ -1.52
GARNL3-214ENST00000478696 PLEKHG3A1L390 1219 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 WNT7BP56706 349 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 PRR20EP86478 221 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 PRR20CP86479 221 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 PRR20DP86480 221 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 PRR20BP86481 221 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 PRR20AP86496 221 aa5.53□□□□□ -1.52
GARNL3-214ENST00000478696 TNFRSF10AO00220 468 aa5.52□□□□□ -1.53
GARNL3-214ENST00000478696 PRKCSHP14314 528 aaPredicted RBP5.52□□□□□ -1.53
GARNL3-214ENST00000478696 PKDCCQ504Y2 493 aa5.52□□□□□ -1.53
GARNL3-214ENST00000478696 RTL5Q5HYW3 569 aaPredicted RBP5.52□□□□□ -1.53
GARNL3-214ENST00000478696 CYP4X1Q8N118 509 aa5.52□□□□□ -1.53
GARNL3-214ENST00000478696 PROCA1Q8NCQ7 364 aaPredicted RBP5.52□□□□□ -1.53
GARNL3-214ENST00000478696 ARMC2Q8NEN0 867 aa5.52□□□□□ -1.53
GARNL3-214ENST00000478696 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
GARNL3-214ENST00000478696 TTC24A2A3L6 582 aaPredicted RBP5.51□□□□□ -1.53
GARNL3-214ENST00000478696 GDF9O60383 454 aa5.51□□□□□ -1.53
GARNL3-214ENST00000478696 PTCRAQ6ISU1 281 aaPredicted RBP5.51□□□□□ -1.53
GARNL3-214ENST00000478696 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.51□□□□□ -1.53
GARNL3-214ENST00000478696 WNT7AO00755 349 aa5.5□□□□□ -1.53
GARNL3-214ENST00000478696 RC3H1Q5TC82 1133 aaKnown RBP5.5□□□□□ -1.53
GARNL3-214ENST00000478696 PPP2R2DQ66LE6 453 aa5.5□□□□□ -1.53
GARNL3-214ENST00000478696 EHBP1Q8NDI1 1231 aa5.5□□□□□ -1.53
GARNL3-214ENST00000478696 FAM187AA6NFU0 413 aa5.49□□□□□ -1.53
GARNL3-214ENST00000478696 AP1G2O75843 785 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms