RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
ITGA4-209ENST00000478440 ZNF775Q96BV0 537 aaPredicted RBP11.9□□□□□ -0.5
ITGA4-209ENST00000478440 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
ITGA4-209ENST00000478440 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
ITGA4-209ENST00000478440 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
ITGA4-209ENST00000478440 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
ITGA4-209ENST00000478440 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
ITGA4-209ENST00000478440 RETREG3Q86VR2 466 aa11.88□□□□□ -0.51
ITGA4-209ENST00000478440 FAM160A2Q8N612 972 aaPredicted RBP11.87□□□□□ -0.51
ITGA4-209ENST00000478440 HLA-CQ95604 372 aa11.87□□□□□ -0.51
ITGA4-209ENST00000478440 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
ITGA4-209ENST00000478440 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
ITGA4-209ENST00000478440 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
ITGA4-209ENST00000478440 SPTLC1O15269 473 aa11.85□□□□□ -0.51
ITGA4-209ENST00000478440 RSBN1LQ6PCB5 846 aaPredicted RBP11.85□□□□□ -0.51
ITGA4-209ENST00000478440 NDUFV2P19404 249 aa11.84□□□□□ -0.51
ITGA4-209ENST00000478440 MMP16P51512 607 aa11.84□□□□□ -0.51
ITGA4-209ENST00000478440 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
ITGA4-209ENST00000478440 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
ITGA4-209ENST00000478440 MTMR2Q13614 643 aa11.83□□□□□ -0.52
ITGA4-209ENST00000478440 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
ITGA4-209ENST00000478440 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
ITGA4-209ENST00000478440 SLC19A1P41440 591 aa11.82□□□□□ -0.52
ITGA4-209ENST00000478440 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
ITGA4-209ENST00000478440 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
ITGA4-209ENST00000478440 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
ITGA4-209ENST00000478440 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
ITGA4-209ENST00000478440 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
ITGA4-209ENST00000478440 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
ITGA4-209ENST00000478440 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
ITGA4-209ENST00000478440 JUNDP17535 347 aa11.8□□□□□ -0.52
ITGA4-209ENST00000478440 PRDM9Q9NQV7 894 aa11.8□□□□□ -0.52
ITGA4-209ENST00000478440 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
ITGA4-209ENST00000478440 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
ITGA4-209ENST00000478440 RPIAP49247 311 aa11.79□□□□□ -0.52
ITGA4-209ENST00000478440 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
ITGA4-209ENST00000478440 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
ITGA4-209ENST00000478440 DESI1Q6ICB0 168 aa11.77□□□□□ -0.53
ITGA4-209ENST00000478440 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
ITGA4-209ENST00000478440 FAM117AQ9C073 453 aa11.76□□□□□ -0.53
ITGA4-209ENST00000478440 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
ITGA4-209ENST00000478440 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
ITGA4-209ENST00000478440 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
ITGA4-209ENST00000478440 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
ITGA4-209ENST00000478440 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
ITGA4-209ENST00000478440 HRCP23327 699 aa11.74□□□□□ -0.53
ITGA4-209ENST00000478440 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
ITGA4-209ENST00000478440 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
ITGA4-209ENST00000478440 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
ITGA4-209ENST00000478440 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
ITGA4-209ENST00000478440 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
ITGA4-209ENST00000478440 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
ITGA4-209ENST00000478440 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
ITGA4-209ENST00000478440 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
ITGA4-209ENST00000478440 PTPRNQ16849 979 aa11.72□□□□□ -0.53
ITGA4-209ENST00000478440 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
ITGA4-209ENST00000478440 CCDC24Q8N4L8 307 aa11.72□□□□□ -0.53
ITGA4-209ENST00000478440 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
ITGA4-209ENST00000478440 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
ITGA4-209ENST00000478440 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
ITGA4-209ENST00000478440 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
ITGA4-209ENST00000478440 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
ITGA4-209ENST00000478440 LILRB3O75022 631 aa11.7□□□□□ -0.54
ITGA4-209ENST00000478440 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
ITGA4-209ENST00000478440 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
ITGA4-209ENST00000478440 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
ITGA4-209ENST00000478440 ABCC9O60706 1549 aa11.69□□□□□ -0.54
ITGA4-209ENST00000478440 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
ITGA4-209ENST00000478440 EMID1Q96A84 441 aaPredicted RBP11.68□□□□□ -0.54
ITGA4-209ENST00000478440 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
ITGA4-209ENST00000478440 QPCTQ16769 361 aa11.66□□□□□ -0.54
ITGA4-209ENST00000478440 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
ITGA4-209ENST00000478440 CFAP99D6REC4 459 aa11.65□□□□□ -0.54
ITGA4-209ENST00000478440 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
ITGA4-209ENST00000478440 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
ITGA4-209ENST00000478440 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
ITGA4-209ENST00000478440 PRR20EP86478 221 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 PRR20CP86479 221 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 PRR20DP86480 221 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 PRR20BP86481 221 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 PRR20AP86496 221 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 TRIM32Q13049 653 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 TSC1Q92574 1164 aa11.64□□□□□ -0.55
ITGA4-209ENST00000478440 WNT7BP56706 349 aa11.62□□□□□ -0.55
ITGA4-209ENST00000478440 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
ITGA4-209ENST00000478440 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.62□□□□□ -0.55
ITGA4-209ENST00000478440 LOC100996750A0A140TA64 210 aa11.61□□□□□ -0.55
ITGA4-209ENST00000478440 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
ITGA4-209ENST00000478440 KRTAP4-6Q9BYQ5 205 aa11.61□□□□□ -0.55
ITGA4-209ENST00000478440 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
ITGA4-209ENST00000478440 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
ITGA4-209ENST00000478440 CTHP32929 405 aa11.59□□□□□ -0.55
ITGA4-209ENST00000478440 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
ITGA4-209ENST00000478440 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
ITGA4-209ENST00000478440 WNT7AO00755 349 aa11.57□□□□□ -0.56
ITGA4-209ENST00000478440 GDF9O60383 454 aa11.57□□□□□ -0.56
ITGA4-209ENST00000478440 FOXC1Q12948 553 aa11.57□□□□□ -0.56
ITGA4-209ENST00000478440 TRIM67Q6ZTA4 783 aa11.56□□□□□ -0.56
ITGA4-209ENST00000478440 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms