RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SSFA2P28290 1259 aa12.35□□□□□ -0.43
COL13A1-207ENST00000478219 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
COL13A1-207ENST00000478219 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
COL13A1-207ENST00000478219 ABCC2Q92887 1545 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 TERF1P54274 439 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
COL13A1-207ENST00000478219 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 GBP4Q96PP9 640 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 PTPRGP23470 1445 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
COL13A1-207ENST00000478219 CCDC144AA2RUR9 1427 aa12.33□□□□□ -0.44
COL13A1-207ENST00000478219 C9orf84Q5VXU9 1444 aa12.33□□□□□ -0.44
COL13A1-207ENST00000478219 KIF2CQ99661 725 aa12.33□□□□□ -0.44
COL13A1-207ENST00000478219 HSP90AB1P08238 724 aaKnown RBP12.32□□□□□ -0.44
COL13A1-207ENST00000478219 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
COL13A1-207ENST00000478219 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
COL13A1-207ENST00000478219 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
COL13A1-207ENST00000478219 NOL7Q9UMY1 257 aaKnown RBP12.32□□□□□ -0.44
COL13A1-207ENST00000478219 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
COL13A1-207ENST00000478219 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
COL13A1-207ENST00000478219 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
COL13A1-207ENST00000478219 ZNF500O60304 480 aaPredicted RBP12.31□□□□□ -0.44
COL13A1-207ENST00000478219 SNX21Q969T3 373 aa12.31□□□□□ -0.44
COL13A1-207ENST00000478219 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
COL13A1-207ENST00000478219 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
COL13A1-207ENST00000478219 ZSCAN20P17040 1043 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-207ENST00000478219 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
COL13A1-207ENST00000478219 TSC1Q92574 1164 aa12.3□□□□□ -0.44
COL13A1-207ENST00000478219 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
COL13A1-207ENST00000478219 LAMC1P11047 1609 aa12.3□□□□□ -0.44
COL13A1-207ENST00000478219 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-207ENST00000478219 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
COL13A1-207ENST00000478219 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
COL13A1-207ENST00000478219 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL13A1-207ENST00000478219 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
COL13A1-207ENST00000478219 MYO5CQ9NQX4 1742 aa12.29□□□□□ -0.44
COL13A1-207ENST00000478219 DMTNQ08495 405 aa12.28□□□□□ -0.44
COL13A1-207ENST00000478219 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
COL13A1-207ENST00000478219 KLHL40Q2TBA0 621 aa12.28□□□□□ -0.44
COL13A1-207ENST00000478219 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
COL13A1-207ENST00000478219 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
COL13A1-207ENST00000478219 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
COL13A1-207ENST00000478219 DYNC1I1O14576 645 aa12.27□□□□□ -0.44
COL13A1-207ENST00000478219 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.44
COL13A1-207ENST00000478219 NCLP19338 710 aaKnown RBP12.27□□□□□ -0.45
COL13A1-207ENST00000478219 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
COL13A1-207ENST00000478219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL13A1-207ENST00000478219 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.45
COL13A1-207ENST00000478219 NUP160Q12769 1436 aa12.27□□□□□ -0.45
COL13A1-207ENST00000478219 CHAMP1Q96JM3 812 aa12.26□□□□□ -0.45
COL13A1-207ENST00000478219 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
COL13A1-207ENST00000478219 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
COL13A1-207ENST00000478219 ZNF445P59923 1031 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 PKP1Q13835 747 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 CCDC94Q9BW85 323 aaPredicted RBP12.25□□□□□ -0.45
COL13A1-207ENST00000478219 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
COL13A1-207ENST00000478219 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 MYOM1P52179 1685 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 SCAPERQ9BY12 1400 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 K7ELQ4 463 aaPredicted RBP12.25□□□□□ -0.45
COL13A1-207ENST00000478219 HS1BP3Q53T59 392 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
COL13A1-207ENST00000478219 SYNMO15061 1565 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 CCDC141Q6ZP82 1450 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 CBX1P83916 185 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
COL13A1-207ENST00000478219 SASS6Q6UVJ0 657 aa12.24□□□□□ -0.45
COL13A1-207ENST00000478219 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 LMBRD1Q9NUN5 540 aa12.23□□□□□ -0.45
COL13A1-207ENST00000478219 SHROOM2Q13796 1616 aa12.23□□□□□ -0.45
COL13A1-207ENST00000478219 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
COL13A1-207ENST00000478219 MPNDQ8N594 471 aa12.23□□□□□ -0.45
COL13A1-207ENST00000478219 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-207ENST00000478219 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
COL13A1-207ENST00000478219 ABCA8O94911 1581 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 TRIM27P14373 513 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 MTERF4Q7Z6M4 381 aaKnown RBP12.22□□□□□ -0.45
COL13A1-207ENST00000478219 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
COL13A1-207ENST00000478219 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
COL13A1-207ENST00000478219 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.45
COL13A1-207ENST00000478219 PTMSP20962 102 aa12.21□□□□□ -0.45
COL13A1-207ENST00000478219 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms