RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-211ENST00000478080 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
CDHR3-211ENST00000478080 PRAM1Q96QH2 718 aa11.74□□□□□ -0.53
CDHR3-211ENST00000478080 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
CDHR3-211ENST00000478080 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
CDHR3-211ENST00000478080 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
CDHR3-211ENST00000478080 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
CDHR3-211ENST00000478080 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-211ENST00000478080 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
CDHR3-211ENST00000478080 POGKQ9P215 609 aa11.72□□□□□ -0.53
CDHR3-211ENST00000478080 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
CDHR3-211ENST00000478080 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
CDHR3-211ENST00000478080 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
CDHR3-211ENST00000478080 MTHFSP49914 203 aa11.71□□□□□ -0.53
CDHR3-211ENST00000478080 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
CDHR3-211ENST00000478080 PTPRMP28827 1452 aa11.71□□□□□ -0.53
CDHR3-211ENST00000478080 CGNL1Q0VF96 1302 aa11.71□□□□□ -0.54
CDHR3-211ENST00000478080 AGLP35573 1532 aa11.71□□□□□ -0.54
CDHR3-211ENST00000478080 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
CDHR3-211ENST00000478080 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
CDHR3-211ENST00000478080 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
CDHR3-211ENST00000478080 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
CDHR3-211ENST00000478080 A2ML1A8K2U0 1454 aa11.69□□□□□ -0.54
CDHR3-211ENST00000478080 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
CDHR3-211ENST00000478080 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
CDHR3-211ENST00000478080 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
CDHR3-211ENST00000478080 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
CDHR3-211ENST00000478080 SHPRHQ149N8 1683 aa11.67□□□□□ -0.54
CDHR3-211ENST00000478080 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
CDHR3-211ENST00000478080 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
CDHR3-211ENST00000478080 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
CDHR3-211ENST00000478080 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
CDHR3-211ENST00000478080 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
CDHR3-211ENST00000478080 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
CDHR3-211ENST00000478080 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
CDHR3-211ENST00000478080 CABP1Q9NZU7 370 aa11.66□□□□□ -0.54
CDHR3-211ENST00000478080 SKAP1Q86WV1 359 aa11.65□□□□□ -0.54
CDHR3-211ENST00000478080 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
CDHR3-211ENST00000478080 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
CDHR3-211ENST00000478080 FYB1O15117 783 aa11.64□□□□□ -0.55
CDHR3-211ENST00000478080 BCAR3O75815 825 aa11.64□□□□□ -0.55
CDHR3-211ENST00000478080 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
CDHR3-211ENST00000478080 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
CDHR3-211ENST00000478080 ABCC11Q96J66 1382 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 E9PSI1 815 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-211ENST00000478080 FBLN1P23142 703 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDHR3-211ENST00000478080 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
CDHR3-211ENST00000478080 METP08581 1390 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDHR3-211ENST00000478080 NSD2O96028 1365 aa11.62□□□□□ -0.55
CDHR3-211ENST00000478080 NKTRP30414 1462 aaKnown RBP11.61□□□□□ -0.55
CDHR3-211ENST00000478080 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
CDHR3-211ENST00000478080 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
CDHR3-211ENST00000478080 U2SURPO15042 1029 aaKnown RBP11.6□□□□□ -0.55
CDHR3-211ENST00000478080 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
CDHR3-211ENST00000478080 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
CDHR3-211ENST00000478080 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
CDHR3-211ENST00000478080 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
CDHR3-211ENST00000478080 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
CDHR3-211ENST00000478080 NLRP1Q9C000 1473 aa11.59□□□□□ -0.55
CDHR3-211ENST00000478080 TNRQ92752 1358 aa11.58□□□□□ -0.56
CDHR3-211ENST00000478080 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDHR3-211ENST00000478080 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
CDHR3-211ENST00000478080 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
CDHR3-211ENST00000478080 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
CDHR3-211ENST00000478080 PHF23Q9BUL5 403 aaPredicted RBP11.57□□□□□ -0.56
CDHR3-211ENST00000478080 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
CDHR3-211ENST00000478080 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
CDHR3-211ENST00000478080 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
CDHR3-211ENST00000478080 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
CDHR3-211ENST00000478080 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
CDHR3-211ENST00000478080 LTKP29376 864 aa11.55□□□□□ -0.56
CDHR3-211ENST00000478080 COL3A1P02461 1466 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-211ENST00000478080 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-211ENST00000478080 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-211ENST00000478080 TMEM2Q9UHN6 1383 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 NUTM2FA1L443 756 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 NME9Q86XW9 330 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 TNNQ9UQP3 1299 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 PPIP5K1Q6PFW1 1433 aa11.54□□□□□ -0.56
CDHR3-211ENST00000478080 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
CDHR3-211ENST00000478080 NUDT16Q96DE0 195 aaKnown RBP11.54□□□□□ -0.56
CDHR3-211ENST00000478080 ANKRD26Q9UPS8 1709 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms