RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 UNC5CLQ8IV45 518 aa15.16■□□□□ 0.02
SMARCB1-206ENST00000477836 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
SMARCB1-206ENST00000477836 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.16■□□□□ 0.02
SMARCB1-206ENST00000477836 SEPT12Q8IYM1 358 aa15.15■□□□□ 0.02
SMARCB1-206ENST00000477836 BAG6P46379 1132 aa15.14■□□□□ 0.01
SMARCB1-206ENST00000477836 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
SMARCB1-206ENST00000477836 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
SMARCB1-206ENST00000477836 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
SMARCB1-206ENST00000477836 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
SMARCB1-206ENST00000477836 IQGAP3Q86VI3 1631 aa15.12■□□□□ 0.01
SMARCB1-206ENST00000477836 R3HDM1Q15032 1099 aaKnown RBP15.11■□□□□ 0.01
SMARCB1-206ENST00000477836 SLIT2O94813 1529 aa15.11■□□□□ 0.01
SMARCB1-206ENST00000477836 PXDNQ92626 1479 aa15.1■□□□□ 0.01
SMARCB1-206ENST00000477836 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
SMARCB1-206ENST00000477836 FOXO3O43524 673 aa15.08■□□□□ 0
SMARCB1-206ENST00000477836 EN1Q05925 392 aaPredicted RBP15.08■□□□□ 0
SMARCB1-206ENST00000477836 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
SMARCB1-206ENST00000477836 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
SMARCB1-206ENST00000477836 A0A0G2JS52 829 aa15.06■□□□□ 0
SMARCB1-206ENST00000477836 ONECUT3O60422 494 aaPredicted RBP15.06■□□□□ 0
SMARCB1-206ENST00000477836 MYT1Q01538 1121 aa15.06■□□□□ 0
SMARCB1-206ENST00000477836 VPS72Q15906 364 aa15.06■□□□□ 0
SMARCB1-206ENST00000477836 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
SMARCB1-206ENST00000477836 LRPPRCP42704 1394 aaKnown RBP15.04■□□□□ -0
SMARCB1-206ENST00000477836 USP32Q8NFA0 1604 aa15.03■□□□□ -0
SMARCB1-206ENST00000477836 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
SMARCB1-206ENST00000477836 APLP2Q06481 763 aa15.03■□□□□ -0
SMARCB1-206ENST00000477836 NUP155O75694 1391 aa15.02■□□□□ -0
SMARCB1-206ENST00000477836 HAP1P54257 671 aaPredicted RBP15.02■□□□□ -0
SMARCB1-206ENST00000477836 RGPD1P0DJD0 1748 aa15.01□□□□□ -0.01
SMARCB1-206ENST00000477836 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
SMARCB1-206ENST00000477836 HFM1A2PYH4 1435 aa15□□□□□ -0.01
SMARCB1-206ENST00000477836 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
SMARCB1-206ENST00000477836 SPATA31A3Q5VYP0 1347 aa15□□□□□ -0.01
SMARCB1-206ENST00000477836 PLEKHG5O94827 1062 aa15□□□□□ -0.01
SMARCB1-206ENST00000477836 CDC42BPGQ6DT37 1551 aa14.99□□□□□ -0.01
SMARCB1-206ENST00000477836 EZH2Q15910 746 aaKnown RBP14.99□□□□□ -0.01
SMARCB1-206ENST00000477836 FAM98CQ17RN3 349 aaKnown RBP14.99□□□□□ -0.01
SMARCB1-206ENST00000477836 FAM182BQ5T319 152 aa14.99□□□□□ -0.01
SMARCB1-206ENST00000477836 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
SMARCB1-206ENST00000477836 NWD2Q9ULI1 1742 aa14.98□□□□□ -0.01
SMARCB1-206ENST00000477836 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
SMARCB1-206ENST00000477836 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
SMARCB1-206ENST00000477836 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
SMARCB1-206ENST00000477836 UTRNP46939 3433 aa14.96□□□□□ -0.01
SMARCB1-206ENST00000477836 DISP2A7MBM2 1401 aa14.95□□□□□ -0.02
SMARCB1-206ENST00000477836 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
SMARCB1-206ENST00000477836 CLTCL1P53675 1640 aa14.95□□□□□ -0.02
SMARCB1-206ENST00000477836 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
SMARCB1-206ENST00000477836 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
SMARCB1-206ENST00000477836 NAIPQ13075 1403 aa14.94□□□□□ -0.02
SMARCB1-206ENST00000477836 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
SMARCB1-206ENST00000477836 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
SMARCB1-206ENST00000477836 PPP1R1BQ9UD71 204 aaPredicted RBP14.94□□□□□ -0.02
SMARCB1-206ENST00000477836 KIF1BO60333 1816 aa14.92□□□□□ -0.02
SMARCB1-206ENST00000477836 LOC105371045A0A1W2PR82 267 aa14.92□□□□□ -0.02
SMARCB1-206ENST00000477836 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
SMARCB1-206ENST00000477836 CAMKK2Q96RR4 588 aa14.92□□□□□ -0.02
SMARCB1-206ENST00000477836 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
SMARCB1-206ENST00000477836 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
SMARCB1-206ENST00000477836 KIF1AQ12756 1690 aa14.9□□□□□ -0.02
SMARCB1-206ENST00000477836 BTG4Q9NY30 223 aa14.9□□□□□ -0.02
SMARCB1-206ENST00000477836 ADGRB2O60241 1585 aa14.9□□□□□ -0.02
SMARCB1-206ENST00000477836 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 TRIM37O94972 964 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 PSME1Q06323 249 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 WAPLQ7Z5K2 1190 aa14.89□□□□□ -0.03
SMARCB1-206ENST00000477836 CAMTA1Q9Y6Y1 1673 aa14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 APBA3O96018 575 aa14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 ZNF784Q8NCA9 323 aaPredicted RBP14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 SPON1Q9HCB6 807 aa14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 STK26Q9P289 416 aa14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 CEP350Q5VT06 3117 aa14.88□□□□□ -0.03
SMARCB1-206ENST00000477836 NINLQ9Y2I6 1382 aa14.87□□□□□ -0.03
SMARCB1-206ENST00000477836 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
SMARCB1-206ENST00000477836 NBPF14Q5TI25 921 aa14.87□□□□□ -0.03
SMARCB1-206ENST00000477836 PARD3Q8TEW0 1356 aa14.86□□□□□ -0.03
SMARCB1-206ENST00000477836 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
SMARCB1-206ENST00000477836 KCNQ2O43526 872 aa14.86□□□□□ -0.03
SMARCB1-206ENST00000477836 PHF8Q9UPP1 1060 aa14.85□□□□□ -0.03
SMARCB1-206ENST00000477836 SPATA31A5Q5VU36 1347 aa14.85□□□□□ -0.03
SMARCB1-206ENST00000477836 SPATA31A7Q8IWB4 1347 aa14.85□□□□□ -0.03
SMARCB1-206ENST00000477836 ARHGEF10O15013 1369 aa14.85□□□□□ -0.03
SMARCB1-206ENST00000477836 RREB1Q92766 1687 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 NUP188Q5SRE5 1749 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 FAM196AQ6ZSG2 479 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 SBNO1A3KN83 1393 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 PLEKHH1Q9ULM0 1364 aa14.84□□□□□ -0.03
SMARCB1-206ENST00000477836 ITGAEP38570 1179 aa14.83□□□□□ -0.04
SMARCB1-206ENST00000477836 C1QTNF8P60827 252 aa14.83□□□□□ -0.04
SMARCB1-206ENST00000477836 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.04
SMARCB1-206ENST00000477836 RGPD8O14715 1765 aaPredicted RBP14.83□□□□□ -0.04
SMARCB1-206ENST00000477836 COL14A1Q05707 1796 aaKnown RBP14.82□□□□□ -0.04
SMARCB1-206ENST00000477836 PPLO60437 1756 aa14.81□□□□□ -0.04
SMARCB1-206ENST00000477836 TECPR2O15040 1411 aa14.81□□□□□ -0.04
SMARCB1-206ENST00000477836 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
SMARCB1-206ENST00000477836 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms