RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 MED14O60244 1454 aa10.9□□□□□ -0.66
PTPRD-209ENST00000477552 WDR63Q8IWG1 891 aa10.9□□□□□ -0.66
PTPRD-209ENST00000477552 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.67
PTPRD-209ENST00000477552 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.67
PTPRD-209ENST00000477552 MORC1Q86VD1 984 aa10.89□□□□□ -0.67
PTPRD-209ENST00000477552 USP35Q9P2H5 1018 aa10.89□□□□□ -0.67
PTPRD-209ENST00000477552 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
PTPRD-209ENST00000477552 AGLP35573 1532 aa10.89□□□□□ -0.67
PTPRD-209ENST00000477552 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
PTPRD-209ENST00000477552 RUNDC1Q96C34 613 aa10.88□□□□□ -0.67
PTPRD-209ENST00000477552 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
PTPRD-209ENST00000477552 BACH2Q9BYV9 841 aa10.88□□□□□ -0.67
PTPRD-209ENST00000477552 PREX1Q8TCU6 1659 aa10.88□□□□□ -0.67
PTPRD-209ENST00000477552 PLEKHH1Q9ULM0 1364 aa10.88□□□□□ -0.67
PTPRD-209ENST00000477552 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
PTPRD-209ENST00000477552 NSD3Q9BZ95 1437 aa10.87□□□□□ -0.67
PTPRD-209ENST00000477552 MSH5O43196 834 aa10.87□□□□□ -0.67
PTPRD-209ENST00000477552 GGT6Q6P531 493 aa10.87□□□□□ -0.67
PTPRD-209ENST00000477552 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
PTPRD-209ENST00000477552 PDE4AP27815 886 aa10.86□□□□□ -0.67
PTPRD-209ENST00000477552 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
PTPRD-209ENST00000477552 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
PTPRD-209ENST00000477552 SIGLEC1Q9BZZ2 1709 aa10.85□□□□□ -0.67
PTPRD-209ENST00000477552 PPM1GO15355 546 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-209ENST00000477552 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
PTPRD-209ENST00000477552 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-209ENST00000477552 ABCC11Q96J66 1382 aa10.85□□□□□ -0.67
PTPRD-209ENST00000477552 SHPRHQ149N8 1683 aa10.85□□□□□ -0.67
PTPRD-209ENST00000477552 DLC1Q96QB1 1528 aa10.84□□□□□ -0.67
PTPRD-209ENST00000477552 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
PTPRD-209ENST00000477552 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
PTPRD-209ENST00000477552 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
PTPRD-209ENST00000477552 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
PTPRD-209ENST00000477552 APAF1O14727 1248 aa10.83□□□□□ -0.68
PTPRD-209ENST00000477552 RTL5Q5HYW3 569 aaPredicted RBP10.83□□□□□ -0.68
PTPRD-209ENST00000477552 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
PTPRD-209ENST00000477552 VIRMAQ69YN4 1812 aaKnown RBP10.82□□□□□ -0.68
PTPRD-209ENST00000477552 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
PTPRD-209ENST00000477552 PMFBP1Q8TBY8 1022 aa10.82□□□□□ -0.68
PTPRD-209ENST00000477552 IL16Q14005 1332 aa10.82□□□□□ -0.68
PTPRD-209ENST00000477552 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
PTPRD-209ENST00000477552 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
PTPRD-209ENST00000477552 WWC1Q8IX03 1113 aa10.81□□□□□ -0.68
PTPRD-209ENST00000477552 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
PTPRD-209ENST00000477552 CHMP4BQ9H444 224 aaKnown RBP10.81□□□□□ -0.68
PTPRD-209ENST00000477552 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
PTPRD-209ENST00000477552 ADGRB2O60241 1585 aa10.81□□□□□ -0.68
PTPRD-209ENST00000477552 TULP4Q9NRJ4 1543 aa10.8□□□□□ -0.68
PTPRD-209ENST00000477552 HDGFL2Q7Z4V5 671 aaPredicted RBP10.8□□□□□ -0.68
PTPRD-209ENST00000477552 NEFMP07197 916 aa10.79□□□□□ -0.68
PTPRD-209ENST00000477552 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
PTPRD-209ENST00000477552 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRD-209ENST00000477552 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
PTPRD-209ENST00000477552 YTHDC2Q9H6S0 1430 aaKnown RBP10.78□□□□□ -0.68
PTPRD-209ENST00000477552 CALD1Q05682 793 aaKnown RBP10.78□□□□□ -0.68
PTPRD-209ENST00000477552 IDI1Q13907 227 aa10.78□□□□□ -0.68
PTPRD-209ENST00000477552 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
PTPRD-209ENST00000477552 SLC12A5Q9H2X9 1139 aa10.78□□□□□ -0.68
PTPRD-209ENST00000477552 KIF20BQ96Q89 1820 aa10.78□□□□□ -0.68
PTPRD-209ENST00000477552 ATP7BP35670 1465 aa10.78□□□□□ -0.68
PTPRD-209ENST00000477552 SPATA31D1Q6ZQQ2 1576 aa10.77□□□□□ -0.68
PTPRD-209ENST00000477552 PTPRMP28827 1452 aa10.77□□□□□ -0.69
PTPRD-209ENST00000477552 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
PTPRD-209ENST00000477552 CDC42BPGQ6DT37 1551 aa10.77□□□□□ -0.69
PTPRD-209ENST00000477552 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 PLIN1O60240 522 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 MTHFSP49914 203 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 TCP11L2Q8N4U5 519 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 CLUAP1Q96AJ1 413 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 DIP2BQ9P265 1576 aa10.76□□□□□ -0.69
PTPRD-209ENST00000477552 RAPGEF3O95398 923 aa10.75□□□□□ -0.69
PTPRD-209ENST00000477552 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
PTPRD-209ENST00000477552 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
PTPRD-209ENST00000477552 POGKQ9P215 609 aa10.75□□□□□ -0.69
PTPRD-209ENST00000477552 KNDC1Q76NI1 1749 aa10.75□□□□□ -0.69
PTPRD-209ENST00000477552 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
PTPRD-209ENST00000477552 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
PTPRD-209ENST00000477552 IPO8O15397 1037 aaKnown RBP10.73□□□□□ -0.69
PTPRD-209ENST00000477552 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
PTPRD-209ENST00000477552 TMEM132EQ6IEE7 984 aa10.73□□□□□ -0.69
PTPRD-209ENST00000477552 UPF2Q9HAU5 1272 aaKnown RBP10.73□□□□□ -0.69
PTPRD-209ENST00000477552 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
PTPRD-209ENST00000477552 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
PTPRD-209ENST00000477552 ARHGEF40Q8TER5 1519 aa10.73□□□□□ -0.69
PTPRD-209ENST00000477552 FCHSD2O94868 740 aa10.72□□□□□ -0.69
PTPRD-209ENST00000477552 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-209ENST00000477552 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRD-209ENST00000477552 A0A1W2PP64 1363 aa10.72□□□□□ -0.69
PTPRD-209ENST00000477552 FAM135BQ49AJ0 1406 aa10.72□□□□□ -0.69
PTPRD-209ENST00000477552 YEATS2Q9ULM3 1422 aa10.72□□□□□ -0.69
PTPRD-209ENST00000477552 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 BECN1Q14457 450 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 C20orf194Q5TEA3 1177 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 ZKSCAN2Q63HK3 967 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 KIF16BQ96L93 1317 aa10.71□□□□□ -0.69
PTPRD-209ENST00000477552 A2ML1A8K2U0 1454 aa10.7□□□□□ -0.7
PTPRD-209ENST00000477552 COL3A1P02461 1466 aaPredicted RBP10.7□□□□□ -0.7
PTPRD-209ENST00000477552 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
PTPRD-209ENST00000477552 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms