RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 USP47Q96K76 1375 aa23.73■■□□□ 1.39
EPHB4-204ENST00000477446 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
EPHB4-204ENST00000477446 C14orf37Q86TY3 774 aa23.73■■□□□ 1.39
EPHB4-204ENST00000477446 CERKQ8TCT0 537 aa23.72■■□□□ 1.39
EPHB4-204ENST00000477446 QRICH2Q9H0J4 1663 aa23.71■■□□□ 1.39
EPHB4-204ENST00000477446 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
EPHB4-204ENST00000477446 MINK1Q8N4C8 1332 aaPredicted RBP23.69■■□□□ 1.38
EPHB4-204ENST00000477446 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
EPHB4-204ENST00000477446 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
EPHB4-204ENST00000477446 MSH6P52701 1360 aa23.68■■□□□ 1.38
EPHB4-204ENST00000477446 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
EPHB4-204ENST00000477446 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
EPHB4-204ENST00000477446 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
EPHB4-204ENST00000477446 ADGRB2O60241 1585 aa23.64■■□□□ 1.38
EPHB4-204ENST00000477446 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
EPHB4-204ENST00000477446 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
EPHB4-204ENST00000477446 DCCP43146 1447 aa23.63■■□□□ 1.37
EPHB4-204ENST00000477446 SBNO2Q9Y2G9 1366 aa23.62■■□□□ 1.37
EPHB4-204ENST00000477446 ATF3P18847 181 aa23.61■■□□□ 1.37
EPHB4-204ENST00000477446 TESK2Q96S53 571 aa23.61■■□□□ 1.37
EPHB4-204ENST00000477446 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
EPHB4-204ENST00000477446 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
EPHB4-204ENST00000477446 FMN2Q9NZ56 1722 aa23.58■■□□□ 1.37
EPHB4-204ENST00000477446 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
EPHB4-204ENST00000477446 CDK19Q9BWU1 502 aa23.57■■□□□ 1.36
EPHB4-204ENST00000477446 EVC2Q86UK5 1308 aa23.56■■□□□ 1.36
EPHB4-204ENST00000477446 NUTM2FA1L443 756 aa23.55■■□□□ 1.36
EPHB4-204ENST00000477446 MST1RQ04912 1400 aa23.55■■□□□ 1.36
EPHB4-204ENST00000477446 UBAP1LF5GYI3 381 aa23.53■■□□□ 1.36
EPHB4-204ENST00000477446 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
EPHB4-204ENST00000477446 TOM1O60784 492 aa23.53■■□□□ 1.36
EPHB4-204ENST00000477446 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
EPHB4-204ENST00000477446 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
EPHB4-204ENST00000477446 CABP2Q9NPB3 220 aa23.52■■□□□ 1.36
EPHB4-204ENST00000477446 USP32Q8NFA0 1604 aa23.51■■□□□ 1.35
EPHB4-204ENST00000477446 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
EPHB4-204ENST00000477446 TMF1P82094 1093 aa23.51■■□□□ 1.35
EPHB4-204ENST00000477446 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
EPHB4-204ENST00000477446 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
EPHB4-204ENST00000477446 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
EPHB4-204ENST00000477446 ANKARQ7Z5J8 1434 aa23.49■■□□□ 1.35
EPHB4-204ENST00000477446 ATP7BP35670 1465 aa23.48■■□□□ 1.35
EPHB4-204ENST00000477446 FBXO41Q8TF61 875 aa23.48■■□□□ 1.35
EPHB4-204ENST00000477446 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
EPHB4-204ENST00000477446 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
EPHB4-204ENST00000477446 PIP4K2BP78356 416 aa23.45■■□□□ 1.34
EPHB4-204ENST00000477446 ESCO1Q5FWF5 840 aa23.45■■□□□ 1.34
EPHB4-204ENST00000477446 ITSN1Q15811 1721 aa23.44■■□□□ 1.34
EPHB4-204ENST00000477446 C11orf95C9JLR9 678 aaPredicted RBP23.44■■□□□ 1.34
EPHB4-204ENST00000477446 PUS7Q96PZ0 661 aaKnown RBP23.44■■□□□ 1.34
EPHB4-204ENST00000477446 TOPAZ1Q8N9V7 1692 aa23.43■■□□□ 1.34
EPHB4-204ENST00000477446 ROBO1Q9Y6N7 1651 aa23.43■■□□□ 1.34
EPHB4-204ENST00000477446 BRINP3Q76B58 766 aa23.43■■□□□ 1.34
EPHB4-204ENST00000477446 CCDC61Q9Y6R9 512 aa23.43■■□□□ 1.34
EPHB4-204ENST00000477446 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
EPHB4-204ENST00000477446 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
EPHB4-204ENST00000477446 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
EPHB4-204ENST00000477446 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
EPHB4-204ENST00000477446 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
EPHB4-204ENST00000477446 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.33
EPHB4-204ENST00000477446 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
EPHB4-204ENST00000477446 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
EPHB4-204ENST00000477446 MIER1Q8N108 512 aa23.37■■□□□ 1.33
EPHB4-204ENST00000477446 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
EPHB4-204ENST00000477446 POLR3GLQ9BT43 218 aa23.36■■□□□ 1.33
EPHB4-204ENST00000477446 CENPBP07199 599 aaPredicted RBP23.35■■□□□ 1.33
EPHB4-204ENST00000477446 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
EPHB4-204ENST00000477446 FOXO3O43524 673 aa23.35■■□□□ 1.33
EPHB4-204ENST00000477446 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
EPHB4-204ENST00000477446 DDX17Q92841 729 aaKnown RBP23.34■■□□□ 1.33
EPHB4-204ENST00000477446 SLC12A5Q9H2X9 1139 aa23.34■■□□□ 1.33
EPHB4-204ENST00000477446 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.33
EPHB4-204ENST00000477446 MYOM1P52179 1685 aa23.33■■□□□ 1.33
EPHB4-204ENST00000477446 ACEP12821 1306 aa23.32■■□□□ 1.32
EPHB4-204ENST00000477446 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
EPHB4-204ENST00000477446 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
EPHB4-204ENST00000477446 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
EPHB4-204ENST00000477446 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
EPHB4-204ENST00000477446 NINLQ9Y2I6 1382 aa23.31■■□□□ 1.32
EPHB4-204ENST00000477446 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
EPHB4-204ENST00000477446 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
EPHB4-204ENST00000477446 AKAP12Q02952 1782 aa23.28■■□□□ 1.32
EPHB4-204ENST00000477446 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
EPHB4-204ENST00000477446 PSME1Q06323 249 aa23.28■■□□□ 1.32
EPHB4-204ENST00000477446 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
EPHB4-204ENST00000477446 CD163L1Q9NR16 1453 aa23.28■■□□□ 1.32
EPHB4-204ENST00000477446 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
EPHB4-204ENST00000477446 PXDNQ92626 1479 aa23.26■■□□□ 1.31
EPHB4-204ENST00000477446 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
EPHB4-204ENST00000477446 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
EPHB4-204ENST00000477446 TERF2IPQ9NYB0 399 aa23.25■■□□□ 1.31
EPHB4-204ENST00000477446 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
EPHB4-204ENST00000477446 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
EPHB4-204ENST00000477446 A0A1W2PP64 1363 aa23.24■■□□□ 1.31
EPHB4-204ENST00000477446 ANKRD36BQ8N2N9 1353 aa23.23■■□□□ 1.31
EPHB4-204ENST00000477446 COL16A1Q07092 1604 aaPredicted RBP23.23■■□□□ 1.31
EPHB4-204ENST00000477446 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
EPHB4-204ENST00000477446 HSPA1LP34931 641 aa23.23■■□□□ 1.31
EPHB4-204ENST00000477446 KTN1Q86UP2 1357 aaKnown RBP23.23■■□□□ 1.31
EPHB4-204ENST00000477446 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms