RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
PDZRN3-206ENST00000477434 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
PDZRN3-206ENST00000477434 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
PDZRN3-206ENST00000477434 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
PDZRN3-206ENST00000477434 DDRGK1Q96HY6 314 aa8.54□□□□□ -1.04
PDZRN3-206ENST00000477434 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
PDZRN3-206ENST00000477434 SPTLC1O15269 473 aa8.53□□□□□ -1.04
PDZRN3-206ENST00000477434 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
PDZRN3-206ENST00000477434 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 V9GY48 417 aaPredicted RBP8.52□□□□□ -1.05
PDZRN3-206ENST00000477434 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 MMP16P51512 607 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 MTMR2Q13614 643 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 SYMPKQ92797 1274 aaKnown RBP8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
PDZRN3-206ENST00000477434 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
PDZRN3-206ENST00000477434 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-206ENST00000477434 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-206ENST00000477434 PRPF38BQ5VTL8 546 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-206ENST00000477434 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-206ENST00000477434 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
PDZRN3-206ENST00000477434 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
PDZRN3-206ENST00000477434 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-206ENST00000477434 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
PDZRN3-206ENST00000477434 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
PDZRN3-206ENST00000477434 JUNDP17535 347 aa8.47□□□□□ -1.05
PDZRN3-206ENST00000477434 SLC19A1P41440 591 aa8.47□□□□□ -1.05
PDZRN3-206ENST00000477434 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
PDZRN3-206ENST00000477434 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
PDZRN3-206ENST00000477434 HRCP23327 699 aa8.46□□□□□ -1.06
PDZRN3-206ENST00000477434 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
PDZRN3-206ENST00000477434 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
PDZRN3-206ENST00000477434 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-206ENST00000477434 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
PDZRN3-206ENST00000477434 LIAT1Q6ZQX7 453 aa8.45□□□□□ -1.06
PDZRN3-206ENST00000477434 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
PDZRN3-206ENST00000477434 LILRB3O75022 631 aa8.44□□□□□ -1.06
PDZRN3-206ENST00000477434 RPIAP49247 311 aa8.44□□□□□ -1.06
PDZRN3-206ENST00000477434 CSPP1Q1MSJ5 1256 aa8.44□□□□□ -1.06
PDZRN3-206ENST00000477434 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
PDZRN3-206ENST00000477434 QPCTQ16769 361 aa8.43□□□□□ -1.06
PDZRN3-206ENST00000477434 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
PDZRN3-206ENST00000477434 NUTM2BA6NNL0 878 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 NUTM2EB1AL46 878 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 NUTM2AQ8IVF1 878 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
PDZRN3-206ENST00000477434 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-206ENST00000477434 PTPRNQ16849 979 aa8.41□□□□□ -1.06
PDZRN3-206ENST00000477434 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
PDZRN3-206ENST00000477434 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
PDZRN3-206ENST00000477434 IRX2Q9BZI1 471 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-206ENST00000477434 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
PDZRN3-206ENST00000477434 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
PDZRN3-206ENST00000477434 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
PDZRN3-206ENST00000477434 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
PDZRN3-206ENST00000477434 ZNF697Q5TEC3 545 aa8.39□□□□□ -1.07
PDZRN3-206ENST00000477434 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-206ENST00000477434 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
PDZRN3-206ENST00000477434 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-206ENST00000477434 TRIM32Q13049 653 aa8.37□□□□□ -1.07
PDZRN3-206ENST00000477434 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
PDZRN3-206ENST00000477434 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-206ENST00000477434 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
PDZRN3-206ENST00000477434 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-206ENST00000477434 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
PDZRN3-206ENST00000477434 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-206ENST00000477434 KCNH2Q12809 1159 aa8.35□□□□□ -1.07
PDZRN3-206ENST00000477434 TSC1Q92574 1164 aa8.35□□□□□ -1.07
PDZRN3-206ENST00000477434 GFRA3O60609 400 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PRR20EP86478 221 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PRR20CP86479 221 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PRR20DP86480 221 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PRR20BP86481 221 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PRR20AP86496 221 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 TRIM67Q6ZTA4 783 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 PDZRN3Q9UPQ7 1066 aa8.34□□□□□ -1.07
PDZRN3-206ENST00000477434 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-206ENST00000477434 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-206ENST00000477434 GDF9O60383 454 aa8.33□□□□□ -1.08
PDZRN3-206ENST00000477434 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-206ENST00000477434 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
PDZRN3-206ENST00000477434 F12P00748 615 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-206ENST00000477434 WNT7BP56706 349 aa8.32□□□□□ -1.08
PDZRN3-206ENST00000477434 CTHP32929 405 aa8.31□□□□□ -1.08
PDZRN3-206ENST00000477434 PKD2L1Q9P0L9 805 aa8.31□□□□□ -1.08
PDZRN3-206ENST00000477434 WNT7AO00755 349 aa8.3□□□□□ -1.08
PDZRN3-206ENST00000477434 RFC5P40937 340 aa8.3□□□□□ -1.08
PDZRN3-206ENST00000477434 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
PDZRN3-206ENST00000477434 FOXC1Q12948 553 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms