RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
VARS2-209ENST00000477288 WASHC4Q2M389 1173 aa22.53■■□□□ 1.2
VARS2-209ENST00000477288 ODF2Q5BJF6 829 aa22.52■■□□□ 1.2
VARS2-209ENST00000477288 BCL11BQ9C0K0 894 aaPredicted RBP22.51■■□□□ 1.19
VARS2-209ENST00000477288 KDM4AO75164 1064 aa22.5■■□□□ 1.19
VARS2-209ENST00000477288 GSE1Q14687 1217 aa22.5■■□□□ 1.19
VARS2-209ENST00000477288 SAFBQ15424 915 aaKnown RBP eCLIP22.49■■□□□ 1.19
VARS2-209ENST00000477288 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
VARS2-209ENST00000477288 SASS6Q6UVJ0 657 aa22.49■■□□□ 1.19
VARS2-209ENST00000477288 FAM177BA6PVY3 158 aa22.49■■□□□ 1.19
VARS2-209ENST00000477288 RUFY1Q96T51 708 aa22.49■■□□□ 1.19
VARS2-209ENST00000477288 RALYLQ86SE5 291 aaKnown RBP22.48■■□□□ 1.19
VARS2-209ENST00000477288 SMC3Q9UQE7 1217 aa22.48■■□□□ 1.19
VARS2-209ENST00000477288 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
VARS2-209ENST00000477288 ERC2O15083 957 aa22.48■■□□□ 1.19
VARS2-209ENST00000477288 ZFYVE27Q5T4F4 411 aa22.48■■□□□ 1.19
VARS2-209ENST00000477288 IKQ13123 557 aaPredicted RBP22.48■■□□□ 1.19
VARS2-209ENST00000477288 HSP90AB4PQ58FF6 505 aa22.47■■□□□ 1.19
VARS2-209ENST00000477288 TEX35Q5T0J7 233 aa22.47■■□□□ 1.19
VARS2-209ENST00000477288 R3HCC1Q9Y3T6 440 aaKnown RBP22.47■■□□□ 1.19
VARS2-209ENST00000477288 RSPH6AQ9H0K4 717 aa22.46■■□□□ 1.19
VARS2-209ENST00000477288 GNAI1P63096 354 aa22.45■■□□□ 1.18
VARS2-209ENST00000477288 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
VARS2-209ENST00000477288 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
VARS2-209ENST00000477288 EPS15P42566 896 aa22.44■■□□□ 1.18
VARS2-209ENST00000477288 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.182e-6■■■■□ 23.2
VARS2-209ENST00000477288 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
VARS2-209ENST00000477288 AK7Q96M32 723 aa22.44■■□□□ 1.18
VARS2-209ENST00000477288 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 FGD6Q6ZV73 1430 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 HSP90AB2PQ58FF8 381 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 CCDC73Q6ZRK6 1079 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 FAM13BQ9NYF5 915 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
VARS2-209ENST00000477288 BRMS1Q9HCU9 246 aa22.42■■□□□ 1.18
VARS2-209ENST00000477288 IFT57Q9NWB7 429 aa22.42■■□□□ 1.18
VARS2-209ENST00000477288 NLRP6P59044 892 aa22.41■■□□□ 1.18
VARS2-209ENST00000477288 CABP2Q9NPB3 220 aa22.41■■□□□ 1.18
VARS2-209ENST00000477288 UBTFL1P0CB47 393 aaPredicted RBP22.41■■□□□ 1.18
VARS2-209ENST00000477288 MNS1Q8NEH6 495 aa22.41■■□□□ 1.18
VARS2-209ENST00000477288 PPP1R1BQ9UD71 204 aaPredicted RBP22.41■■□□□ 1.18
VARS2-209ENST00000477288 CDR1P51861 262 aa22.41■■□□□ 1.18
VARS2-209ENST00000477288 PDILTQ8N807 584 aa22.41■■□□□ 1.18
VARS2-209ENST00000477288 OFD1O75665 1012 aa22.4■■□□□ 1.18
VARS2-209ENST00000477288 LNPKQ9C0E8 428 aa22.4■■□□□ 1.18
VARS2-209ENST00000477288 RBM42Q9BTD8 480 aaKnown RBP22.4■■□□□ 1.18
VARS2-209ENST00000477288 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.17
VARS2-209ENST00000477288 KIF21BO75037 1637 aa22.39■■□□□ 1.17
VARS2-209ENST00000477288 TTLL5Q6EMB2 1281 aa22.38■■□□□ 1.17
VARS2-209ENST00000477288 TMEM132AQ24JP5 1023 aa22.38■■□□□ 1.17
VARS2-209ENST00000477288 CALRP27797 417 aaKnown RBP22.37■■□□□ 1.17
VARS2-209ENST00000477288 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
VARS2-209ENST00000477288 OLFM4Q6UX06 510 aa22.37■■□□□ 1.17
VARS2-209ENST00000477288 CFTRP13569 1480 aa22.37■■□□□ 1.17
VARS2-209ENST00000477288 CCAR1Q8IX12 1150 aaKnown RBP22.37■■□□□ 1.17
VARS2-209ENST00000477288 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
VARS2-209ENST00000477288 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 CHMP5Q9NZZ3 219 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 KIF6Q6ZMV9 814 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 XBP1P17861 261 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 STRN4Q9NRL3 753 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 SKIDA1Q1XH10 827 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 ESCO1Q5FWF5 840 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 CAGE1Q8TC20 777 aa22.36■■□□□ 1.17
VARS2-209ENST00000477288 FSD1Q9BTV5 496 aa22.35■■□□□ 1.17
VARS2-209ENST00000477288 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
VARS2-209ENST00000477288 CUX1P39880 1505 aa22.35■■□□□ 1.17
VARS2-209ENST00000477288 LRRC9Q6ZRR7 1453 aa22.35■■□□□ 1.17
VARS2-209ENST00000477288 ABTB2Q8N961 1025 aa22.34■■□□□ 1.17
VARS2-209ENST00000477288 DNAJC2Q99543 621 aaKnown RBP22.34■■□□□ 1.17
VARS2-209ENST00000477288 PAF1Q8N7H5 531 aa22.34■■□□□ 1.17
VARS2-209ENST00000477288 TMEM132EQ6IEE7 984 aa22.34■■□□□ 1.17
VARS2-209ENST00000477288 GPRASP1Q5JY77 1395 aa22.34■■□□□ 1.17
VARS2-209ENST00000477288 ARGLU1Q9NWB6 273 aaPredicted RBP22.33■■□□□ 1.17
VARS2-209ENST00000477288 NINLQ9Y2I6 1382 aa22.33■■□□□ 1.17
VARS2-209ENST00000477288 ACBD3Q9H3P7 528 aa22.33■■□□□ 1.17
VARS2-209ENST00000477288 CASKIN1Q8WXD9 1431 aa22.33■■□□□ 1.17
VARS2-209ENST00000477288 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
VARS2-209ENST00000477288 CCDC173Q0VFZ6 552 aa22.32■■□□□ 1.16
VARS2-209ENST00000477288 SART3Q15020 963 aaKnown RBP22.31■■□□□ 1.16
VARS2-209ENST00000477288 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
VARS2-209ENST00000477288 NUCB2P80303 420 aa22.31■■□□□ 1.16
VARS2-209ENST00000477288 HSP90B2PQ58FF3 399 aa22.3■■□□□ 1.16
VARS2-209ENST00000477288 ATP2B1P20020 1258 aa22.3■■□□□ 1.16
VARS2-209ENST00000477288 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
VARS2-209ENST00000477288 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
VARS2-209ENST00000477288 WWC2Q6AWC2 1192 aa22.29■■□□□ 1.16
VARS2-209ENST00000477288 PANK1Q8TE04 598 aa22.29■■□□□ 1.16
VARS2-209ENST00000477288 SDF4Q9BRK5 362 aa22.29■■□□□ 1.16
VARS2-209ENST00000477288 PSMA5P28066 241 aa22.28■■□□□ 1.16
VARS2-209ENST00000477288 NAT10Q9H0A0 1025 aaKnown RBP22.28■■□□□ 1.16
VARS2-209ENST00000477288 CCDC30Q5VVM6 783 aa22.28■■□□□ 1.16
VARS2-209ENST00000477288 NUTM2BA6NNL0 878 aaPredicted RBP22.28■■□□□ 1.16
VARS2-209ENST00000477288 NUTM2EB1AL46 878 aaPredicted RBP22.28■■□□□ 1.16
VARS2-209ENST00000477288 NUTM2AQ8IVF1 878 aaPredicted RBP22.28■■□□□ 1.16
VARS2-209ENST00000477288 STAC3Q96MF2 364 aa22.27■■□□□ 1.16
VARS2-209ENST00000477288 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.27■■□□□ 1.16
VARS2-209ENST00000477288 PLEKHO1Q53GL0 409 aaPredicted RBP22.27■■□□□ 1.16
VARS2-209ENST00000477288 SLC3A2P08195 630 aaKnown RBP22.27■■□□□ 1.15
VARS2-209ENST00000477288 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms