RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PUS7Q96PZ0 661 aaKnown RBP19.82■□□□□ 0.76
COL4A6-206ENST00000477085 SLC12A5Q9H2X9 1139 aa19.81■□□□□ 0.76
COL4A6-206ENST00000477085 ROBO2Q9HCK4 1378 aa19.81■□□□□ 0.76
COL4A6-206ENST00000477085 ANKLE2Q86XL3 938 aa19.8■□□□□ 0.76
COL4A6-206ENST00000477085 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
COL4A6-206ENST00000477085 KNDC1Q76NI1 1749 aa19.8■□□□□ 0.76
COL4A6-206ENST00000477085 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
COL4A6-206ENST00000477085 CPS1P31327 1500 aa19.79■□□□□ 0.76
COL4A6-206ENST00000477085 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
COL4A6-206ENST00000477085 CDK19Q9BWU1 502 aa19.78■□□□□ 0.76
COL4A6-206ENST00000477085 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
COL4A6-206ENST00000477085 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
COL4A6-206ENST00000477085 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
COL4A6-206ENST00000477085 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
COL4A6-206ENST00000477085 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
COL4A6-206ENST00000477085 DIP2AQ14689 1571 aa19.76■□□□□ 0.75
COL4A6-206ENST00000477085 RALBP1Q15311 655 aa19.75■□□□□ 0.75
COL4A6-206ENST00000477085 KNSTRNQ9Y448 316 aa19.75■□□□□ 0.75
COL4A6-206ENST00000477085 KTN1Q86UP2 1357 aaKnown RBP19.74■□□□□ 0.75
COL4A6-206ENST00000477085 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
COL4A6-206ENST00000477085 WASLO00401 505 aaPredicted RBP19.72■□□□□ 0.75
COL4A6-206ENST00000477085 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
COL4A6-206ENST00000477085 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.71■□□□□ 0.75
COL4A6-206ENST00000477085 MYBBP1AQ9BQG0 1328 aaKnown RBP19.7■□□□□ 0.74
COL4A6-206ENST00000477085 KCNA6P17658 529 aa19.7■□□□□ 0.74
COL4A6-206ENST00000477085 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
COL4A6-206ENST00000477085 NPHP4O75161 1426 aaPredicted RBP19.69■□□□□ 0.74
COL4A6-206ENST00000477085 XRN1Q8IZH2 1706 aaKnown RBP19.69■□□□□ 0.74
COL4A6-206ENST00000477085 PIK3R4Q99570 1358 aa19.69■□□□□ 0.74
COL4A6-206ENST00000477085 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
COL4A6-206ENST00000477085 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
COL4A6-206ENST00000477085 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
COL4A6-206ENST00000477085 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
COL4A6-206ENST00000477085 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
COL4A6-206ENST00000477085 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
COL4A6-206ENST00000477085 NINLQ9Y2I6 1382 aa19.66■□□□□ 0.74
COL4A6-206ENST00000477085 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
COL4A6-206ENST00000477085 HSPA2P54652 639 aa19.64■□□□□ 0.73
COL4A6-206ENST00000477085 PRR36Q9H6K5 1346 aa19.64■□□□□ 0.73
COL4A6-206ENST00000477085 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
COL4A6-206ENST00000477085 NUDT16Q96DE0 195 aaKnown RBP19.63■□□□□ 0.73
COL4A6-206ENST00000477085 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
COL4A6-206ENST00000477085 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
COL4A6-206ENST00000477085 CHD2O14647 1828 aaKnown RBP19.62■□□□□ 0.73
COL4A6-206ENST00000477085 FAM9BQ8IZU0 186 aa19.62■□□□□ 0.73
COL4A6-206ENST00000477085 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
COL4A6-206ENST00000477085 PPP2R1AP30153 589 aa19.61■□□□□ 0.73
COL4A6-206ENST00000477085 ATP7BP35670 1465 aa19.6■□□□□ 0.73
COL4A6-206ENST00000477085 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
COL4A6-206ENST00000477085 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
COL4A6-206ENST00000477085 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
COL4A6-206ENST00000477085 RBM33Q96EV2 1170 aaKnown RBP19.59■□□□□ 0.73
COL4A6-206ENST00000477085 TERF2IPQ9NYB0 399 aa19.59■□□□□ 0.73
COL4A6-206ENST00000477085 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
COL4A6-206ENST00000477085 USP32Q8NFA0 1604 aa19.59■□□□□ 0.73
COL4A6-206ENST00000477085 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
COL4A6-206ENST00000477085 CPSF1Q10570 1443 aaKnown RBP19.57■□□□□ 0.72
COL4A6-206ENST00000477085 CGNL1Q0VF96 1302 aa19.56■□□□□ 0.72
COL4A6-206ENST00000477085 HDGFL2Q7Z4V5 671 aaPredicted RBP19.55■□□□□ 0.72
COL4A6-206ENST00000477085 FYB1O15117 783 aa19.54■□□□□ 0.72
COL4A6-206ENST00000477085 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
COL4A6-206ENST00000477085 NWD1Q149M9 1564 aa19.52■□□□□ 0.72
COL4A6-206ENST00000477085 PLEKHG3A1L390 1219 aa19.52■□□□□ 0.71
COL4A6-206ENST00000477085 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
COL4A6-206ENST00000477085 TOPAZ1Q8N9V7 1692 aa19.51■□□□□ 0.71
COL4A6-206ENST00000477085 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL4A6-206ENST00000477085 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
COL4A6-206ENST00000477085 NKTRP30414 1462 aaKnown RBP19.5■□□□□ 0.71
COL4A6-206ENST00000477085 NSD2O96028 1365 aa19.5■□□□□ 0.71
COL4A6-206ENST00000477085 NALCNQ8IZF0 1738 aa19.5■□□□□ 0.71
COL4A6-206ENST00000477085 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
COL4A6-206ENST00000477085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
COL4A6-206ENST00000477085 STRCQ7RTU9 1775 aa19.48■□□□□ 0.71
COL4A6-206ENST00000477085 ACEP12821 1306 aa19.48■□□□□ 0.71
COL4A6-206ENST00000477085 EDC4Q6P2E9 1401 aaKnown RBP19.47■□□□□ 0.71
COL4A6-206ENST00000477085 ADGRL3Q9HAR2 1447 aa19.46■□□□□ 0.71
COL4A6-206ENST00000477085 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
COL4A6-206ENST00000477085 ZNF692Q9BU19 519 aaPredicted RBP19.46■□□□□ 0.71
COL4A6-206ENST00000477085 FMN2Q9NZ56 1722 aa19.45■□□□□ 0.7
COL4A6-206ENST00000477085 STRCP1A6NGW2 1772 aa19.45■□□□□ 0.7
COL4A6-206ENST00000477085 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
COL4A6-206ENST00000477085 AKAP12Q02952 1782 aa19.45■□□□□ 0.7
COL4A6-206ENST00000477085 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
COL4A6-206ENST00000477085 PROSER2Q86WR7 435 aaPredicted RBP19.44■□□□□ 0.7
COL4A6-206ENST00000477085 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
COL4A6-206ENST00000477085 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
COL4A6-206ENST00000477085 NME9Q86XW9 330 aa19.44■□□□□ 0.7
COL4A6-206ENST00000477085 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 MTHFSP49914 203 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
COL4A6-206ENST00000477085 SSH2Q76I76 1423 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 USP6P35125 1406 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
COL4A6-206ENST00000477085 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
COL4A6-206ENST00000477085 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
COL4A6-206ENST00000477085 TTC21BQ7Z4L5 1316 aa19.4■□□□□ 0.7
COL4A6-206ENST00000477085 FBLN1P23142 703 aa19.4■□□□□ 0.7
COL4A6-206ENST00000477085 NRKQ7Z2Y5 1582 aa19.4■□□□□ 0.7
COL4A6-206ENST00000477085 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms