RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 KANK1Q14678 1352 aa10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 SOX12O15370 315 aa10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 L1TD1Q5T7N2 865 aaKnown RBP10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PHF14O94880 888 aa10.66□□□□□ -0.7
CNTNAP3B-205ENST00000476961 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
CNTNAP3B-205ENST00000476961 SLC20A2Q08357 652 aa10.66□□□□□ -0.7
CNTNAP3B-205ENST00000476961 ARID3AQ99856 593 aa10.66□□□□□ -0.7
CNTNAP3B-205ENST00000476961 ATP10AO60312 1499 aa10.66□□□□□ -0.7
CNTNAP3B-205ENST00000476961 GGT6Q6P531 493 aa10.65□□□□□ -0.7
CNTNAP3B-205ENST00000476961 TET3O43151 1660 aa10.65□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PTMSP20962 102 aa10.65□□□□□ -0.71
CNTNAP3B-205ENST00000476961 NGEFQ8N5V2 710 aa10.65□□□□□ -0.71
CNTNAP3B-205ENST00000476961 E9PCH4 1651 aa10.64□□□□□ -0.71
CNTNAP3B-205ENST00000476961 LETM1O95202 739 aaPredicted RBP10.64□□□□□ -0.71
CNTNAP3B-205ENST00000476961 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
CNTNAP3B-205ENST00000476961 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
CNTNAP3B-205ENST00000476961 CCER2I3L3R5 266 aa10.64□□□□□ -0.71
CNTNAP3B-205ENST00000476961 RIPK4P57078 832 aa10.63□□□□□ -0.71
CNTNAP3B-205ENST00000476961 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
CNTNAP3B-205ENST00000476961 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
CNTNAP3B-205ENST00000476961 ZBTB22O15209 634 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 MTERF4Q7Z6M4 381 aaKnown RBP10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 PTPRTO14522 1441 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 EFCAB6Q5THR3 1501 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 ARHGEF40Q8TER5 1519 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 ABCC3O15438 1527 aa10.62□□□□□ -0.71
CNTNAP3B-205ENST00000476961 CEP152O94986 1710 aa10.61□□□□□ -0.71
CNTNAP3B-205ENST00000476961 AGLP35573 1532 aa10.61□□□□□ -0.71
CNTNAP3B-205ENST00000476961 SIGLEC1Q9BZZ2 1709 aa10.61□□□□□ -0.71
CNTNAP3B-205ENST00000476961 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
CNTNAP3B-205ENST00000476961 TRPM2O94759 1503 aa10.6□□□□□ -0.71
CNTNAP3B-205ENST00000476961 TERF1P54274 439 aa10.6□□□□□ -0.71
CNTNAP3B-205ENST00000476961 KIAA1211Q6ZU35 1233 aa10.6□□□□□ -0.71
CNTNAP3B-205ENST00000476961 PUS7Q96PZ0 661 aaKnown RBP10.6□□□□□ -0.71
CNTNAP3B-205ENST00000476961 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
CNTNAP3B-205ENST00000476961 NPATQ14207 1427 aa10.59□□□□□ -0.71
CNTNAP3B-205ENST00000476961 SPHKAPQ2M3C7 1700 aa10.58□□□□□ -0.72
CNTNAP3B-205ENST00000476961 ESPNB1AK53 854 aa10.58□□□□□ -0.72
CNTNAP3B-205ENST00000476961 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
CNTNAP3B-205ENST00000476961 YY1AP1Q9H869 796 aa10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 GEMIN8Q9NWZ8 242 aaKnown RBP10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 RALBP1Q15311 655 aa10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CLTCL1P53675 1640 aa10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CAMSAP1Q5T5Y3 1602 aa10.57□□□□□ -0.72
CNTNAP3B-205ENST00000476961 SPATA31E1Q6ZUB1 1445 aa10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 AEBP1Q8IUX7 1158 aa10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 DNAJC2Q99543 621 aaKnown RBP10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 RGL3Q3MIN7 710 aa10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 ZC3H13Q5T200 1668 aaKnown RBP10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 ARHGAP31Q2M1Z3 1444 aa10.56□□□□□ -0.72
CNTNAP3B-205ENST00000476961 PSMD1Q99460 953 aa10.55□□□□□ -0.72
CNTNAP3B-205ENST00000476961 UGGT1Q9NYU2 1555 aa10.55□□□□□ -0.72
CNTNAP3B-205ENST00000476961 UHRF1BP1Q6BDS2 1440 aa10.55□□□□□ -0.72
CNTNAP3B-205ENST00000476961 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 XRCC6P12956 609 aaKnown RBP eCLIP10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 MLECQ14165 292 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CHMP4CQ96CF2 233 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 NOS1P29475 1434 aa10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
CNTNAP3B-205ENST00000476961 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CNTLNQ9NXG0 1405 aa10.53□□□□□ -0.72
CNTNAP3B-205ENST00000476961 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
CNTNAP3B-205ENST00000476961 POGKQ9P215 609 aa10.53□□□□□ -0.72
CNTNAP3B-205ENST00000476961 CEP120Q8N960 986 aa10.52□□□□□ -0.73
CNTNAP3B-205ENST00000476961 TRIM44Q96DX7 344 aaPredicted RBP10.52□□□□□ -0.73
CNTNAP3B-205ENST00000476961 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.73
CNTNAP3B-205ENST00000476961 CGNQ9P2M7 1197 aaKnown RBP10.52□□□□□ -0.73
CNTNAP3B-205ENST00000476961 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 SH3BP1Q9Y3L3 701 aa10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 SYNMO15061 1565 aa10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 PRAG1Q86YV5 1406 aa10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 NEURL4Q96JN8 1562 aa10.51□□□□□ -0.73
CNTNAP3B-205ENST00000476961 FBXO31Q5XUX0 539 aaPredicted RBP10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 TMC1Q8TDI8 760 aa10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 CFAP65Q6ZU64 1925 aaKnown RBP10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
CNTNAP3B-205ENST00000476961 IRF6O14896 467 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 PDE4AP27815 886 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 BACH2Q9BYV9 841 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 PREX1Q8TCU6 1659 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 ADGRB3O60242 1522 aa10.49□□□□□ -0.73
CNTNAP3B-205ENST00000476961 PIK3C2BO00750 1634 aa10.48□□□□□ -0.73
CNTNAP3B-205ENST00000476961 OFD1O75665 1012 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms