RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
UBE4B-208ENST00000475795 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
UBE4B-208ENST00000475795 LAMC1P11047 1609 aa10.87□□□□□ -0.67
UBE4B-208ENST00000475795 PRAG1Q86YV5 1406 aa10.86□□□□□ -0.67
UBE4B-208ENST00000475795 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-208ENST00000475795 ZNF772Q68DY9 489 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-208ENST00000475795 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
UBE4B-208ENST00000475795 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
UBE4B-208ENST00000475795 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
UBE4B-208ENST00000475795 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
UBE4B-208ENST00000475795 C1orf167Q5SNV9 1468 aa10.84□□□□□ -0.67
UBE4B-208ENST00000475795 PNPLA6Q8IY17 1366 aa10.83□□□□□ -0.68
UBE4B-208ENST00000475795 NUTM2BA6NNL0 878 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-208ENST00000475795 NUTM2EB1AL46 878 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-208ENST00000475795 NUTM2AQ8IVF1 878 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-208ENST00000475795 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
UBE4B-208ENST00000475795 DDX17Q92841 729 aaKnown RBP10.82□□□□□ -0.68
UBE4B-208ENST00000475795 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
UBE4B-208ENST00000475795 AFF2P51816 1311 aa10.81□□□□□ -0.68
UBE4B-208ENST00000475795 RXRBP28702 533 aa10.8□□□□□ -0.68
UBE4B-208ENST00000475795 CCDC144AA2RUR9 1427 aa10.8□□□□□ -0.68
UBE4B-208ENST00000475795 CDC42BPGQ6DT37 1551 aa10.8□□□□□ -0.68
UBE4B-208ENST00000475795 KNDC1Q76NI1 1749 aa10.8□□□□□ -0.68
UBE4B-208ENST00000475795 SPATA31E1Q6ZUB1 1445 aa10.79□□□□□ -0.68
UBE4B-208ENST00000475795 COL22A1Q8NFW1 1626 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-208ENST00000475795 SOS2Q07890 1332 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-208ENST00000475795 ORAI2Q96SN7 254 aa10.78□□□□□ -0.68
UBE4B-208ENST00000475795 ADGRF5Q8IZF2 1346 aa10.78□□□□□ -0.68
UBE4B-208ENST00000475795 TECPR2O15040 1411 aa10.77□□□□□ -0.68
UBE4B-208ENST00000475795 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBE4B-208ENST00000475795 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
UBE4B-208ENST00000475795 MARF1Q9Y4F3 1742 aaKnown RBP10.77□□□□□ -0.69
UBE4B-208ENST00000475795 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
UBE4B-208ENST00000475795 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
UBE4B-208ENST00000475795 RGS12O14924 1447 aa10.75□□□□□ -0.69
UBE4B-208ENST00000475795 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
UBE4B-208ENST00000475795 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
UBE4B-208ENST00000475795 LRPPRCP42704 1394 aaKnown RBP10.75□□□□□ -0.69
UBE4B-208ENST00000475795 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
UBE4B-208ENST00000475795 PXDNQ92626 1479 aa10.74□□□□□ -0.69
UBE4B-208ENST00000475795 ADAMTS2O95450 1211 aa10.74□□□□□ -0.69
UBE4B-208ENST00000475795 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
UBE4B-208ENST00000475795 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
UBE4B-208ENST00000475795 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
UBE4B-208ENST00000475795 KIF1AQ12756 1690 aa10.73□□□□□ -0.69
UBE4B-208ENST00000475795 RGPD8O14715 1765 aaPredicted RBP10.73□□□□□ -0.69
UBE4B-208ENST00000475795 NGLY1Q96IV0 654 aa10.73□□□□□ -0.69
UBE4B-208ENST00000475795 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
UBE4B-208ENST00000475795 MYOM2P54296 1465 aa10.73□□□□□ -0.69
UBE4B-208ENST00000475795 ESCO1Q5FWF5 840 aa10.72□□□□□ -0.69
UBE4B-208ENST00000475795 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
UBE4B-208ENST00000475795 STK26Q9P289 416 aa10.72□□□□□ -0.69
UBE4B-208ENST00000475795 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
UBE4B-208ENST00000475795 PLEKHH1Q9ULM0 1364 aa10.72□□□□□ -0.69
UBE4B-208ENST00000475795 YTHDC2Q9H6S0 1430 aaKnown RBP10.72□□□□□ -0.69
UBE4B-208ENST00000475795 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
UBE4B-208ENST00000475795 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.69
UBE4B-208ENST00000475795 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
UBE4B-208ENST00000475795 ATRNO75882 1429 aa10.7□□□□□ -0.7
UBE4B-208ENST00000475795 FNBP4Q8N3X1 1017 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-208ENST00000475795 USP21Q9UK80 565 aa10.7□□□□□ -0.7
UBE4B-208ENST00000475795 FOXO3O43524 673 aa10.69□□□□□ -0.7
UBE4B-208ENST00000475795 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
UBE4B-208ENST00000475795 TRPC5Q9UL62 973 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-208ENST00000475795 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-208ENST00000475795 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
UBE4B-208ENST00000475795 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
UBE4B-208ENST00000475795 C14orf93Q9H972 538 aaKnown RBP10.68□□□□□ -0.7
UBE4B-208ENST00000475795 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
UBE4B-208ENST00000475795 USP32Q8NFA0 1604 aa10.67□□□□□ -0.7
UBE4B-208ENST00000475795 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
UBE4B-208ENST00000475795 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
UBE4B-208ENST00000475795 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
UBE4B-208ENST00000475795 DLC1Q96QB1 1528 aa10.66□□□□□ -0.7
UBE4B-208ENST00000475795 ABCA3Q99758 1704 aa10.66□□□□□ -0.7
UBE4B-208ENST00000475795 RAB3GAP2Q9H2M9 1393 aa10.65□□□□□ -0.7
UBE4B-208ENST00000475795 ADGRB2O60241 1585 aa10.65□□□□□ -0.7
UBE4B-208ENST00000475795 SPATA31A3Q5VYP0 1347 aa10.65□□□□□ -0.7
UBE4B-208ENST00000475795 ADGRB1O14514 1584 aa10.65□□□□□ -0.71
UBE4B-208ENST00000475795 SLIT2O94813 1529 aa10.64□□□□□ -0.71
UBE4B-208ENST00000475795 TNS3Q68CZ2 1445 aa10.64□□□□□ -0.71
UBE4B-208ENST00000475795 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
UBE4B-208ENST00000475795 PLCH1Q4KWH8 1693 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 KRT28Q7Z3Y7 464 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 PRAM1Q96QH2 718 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 GLI3P10071 1580 aa10.63□□□□□ -0.71
UBE4B-208ENST00000475795 TRPM3Q9HCF6 1732 aaPredicted RBP10.62□□□□□ -0.71
UBE4B-208ENST00000475795 ANKARQ7Z5J8 1434 aa10.62□□□□□ -0.71
UBE4B-208ENST00000475795 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
UBE4B-208ENST00000475795 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
UBE4B-208ENST00000475795 SBNO1A3KN83 1393 aa10.62□□□□□ -0.71
UBE4B-208ENST00000475795 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
UBE4B-208ENST00000475795 PSME1Q06323 249 aa10.61□□□□□ -0.71
UBE4B-208ENST00000475795 SAFB2Q14151 953 aaKnown RBP eCLIP10.61□□□□□ -0.71
UBE4B-208ENST00000475795 EP400Q96L91 3159 aa10.61□□□□□ -0.71
UBE4B-208ENST00000475795 ALS2Q96Q42 1657 aa10.6□□□□□ -0.71
UBE4B-208ENST00000475795 POGKQ9P215 609 aa10.6□□□□□ -0.71
UBE4B-208ENST00000475795 ARHGEF28Q8N1W1 1705 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms