RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
LSG1-207ENST00000475763 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
LSG1-207ENST00000475763 GOLGA2Q08379 1002 aa15.94■□□□□ 0.14
LSG1-207ENST00000475763 MKRN3Q13064 507 aaKnown RBP15.93■□□□□ 0.14
LSG1-207ENST00000475763 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
LSG1-207ENST00000475763 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
LSG1-207ENST00000475763 DCAF11Q8TEB1 546 aa15.92■□□□□ 0.14
LSG1-207ENST00000475763 IFT172Q9UG01 1749 aa15.91■□□□□ 0.14
LSG1-207ENST00000475763 NBPF8Q3BBV2 869 aa15.91■□□□□ 0.14
LSG1-207ENST00000475763 RGL3Q3MIN7 710 aa15.91■□□□□ 0.14
LSG1-207ENST00000475763 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
LSG1-207ENST00000475763 PRAG1Q86YV5 1406 aa15.91■□□□□ 0.14
LSG1-207ENST00000475763 RALGAPBQ86X10 1494 aa15.91■□□□□ 0.14
LSG1-207ENST00000475763 LCE2DQ5TA82 110 aaPredicted RBP15.9■□□□□ 0.14
LSG1-207ENST00000475763 POTEMA6NI47 508 aa15.89■□□□□ 0.13
LSG1-207ENST00000475763 FAM163AQ96GL9 167 aaPredicted RBP15.89■□□□□ 0.13
LSG1-207ENST00000475763 MYOM2P54296 1465 aa15.89■□□□□ 0.13
LSG1-207ENST00000475763 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
LSG1-207ENST00000475763 SLAIN1Q8ND83 568 aa15.88■□□□□ 0.13
LSG1-207ENST00000475763 TRPM1Q7Z4N2 1603 aa15.87■□□□□ 0.13
LSG1-207ENST00000475763 POTEGQ6S5H5 508 aa15.87■□□□□ 0.13
LSG1-207ENST00000475763 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
LSG1-207ENST00000475763 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 PPLO60437 1756 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 IDI1Q13907 227 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
LSG1-207ENST00000475763 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 C3P01024 1663 aa15.86■□□□□ 0.13
LSG1-207ENST00000475763 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
LSG1-207ENST00000475763 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
LSG1-207ENST00000475763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
LSG1-207ENST00000475763 LAMC1P11047 1609 aa15.85■□□□□ 0.13
LSG1-207ENST00000475763 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
LSG1-207ENST00000475763 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
LSG1-207ENST00000475763 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
LSG1-207ENST00000475763 EIF4G2P78344 907 aaKnown RBP eCLIP15.83■□□□□ 0.126e-6■■■■□ 25.1
LSG1-207ENST00000475763 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
LSG1-207ENST00000475763 TNRQ92752 1358 aa15.83■□□□□ 0.12
LSG1-207ENST00000475763 MYO5BQ9ULV0 1848 aa15.82■□□□□ 0.12
LSG1-207ENST00000475763 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
LSG1-207ENST00000475763 NEXMIFQ5QGS0 1516 aa15.82■□□□□ 0.12
LSG1-207ENST00000475763 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
LSG1-207ENST00000475763 RNF25Q96BH1 459 aaPredicted RBP15.81■□□□□ 0.12
LSG1-207ENST00000475763 NLRP1Q9C000 1473 aa15.81■□□□□ 0.12
LSG1-207ENST00000475763 RIMS1Q86UR5 1692 aaKnown RBP15.79■□□□□ 0.12
LSG1-207ENST00000475763 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
LSG1-207ENST00000475763 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
LSG1-207ENST00000475763 VGFO15240 615 aaPredicted RBP15.78■□□□□ 0.12
LSG1-207ENST00000475763 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
LSG1-207ENST00000475763 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.12
LSG1-207ENST00000475763 ILDR1Q86SU0 546 aaPredicted RBP15.77■□□□□ 0.12
LSG1-207ENST00000475763 PIK3C2GO75747 1445 aa15.77■□□□□ 0.11
LSG1-207ENST00000475763 USP47Q96K76 1375 aa15.76■□□□□ 0.11
LSG1-207ENST00000475763 DPY19L2Q6NUT2 758 aa15.76■□□□□ 0.11
LSG1-207ENST00000475763 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
LSG1-207ENST00000475763 SETBP1Q9Y6X0 1596 aa15.75■□□□□ 0.11
LSG1-207ENST00000475763 ADGRF5Q8IZF2 1346 aa15.75■□□□□ 0.11
LSG1-207ENST00000475763 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.75■□□□□ 0.11
LSG1-207ENST00000475763 RIOK3O14730 519 aaKnown RBP15.74■□□□□ 0.11
LSG1-207ENST00000475763 POLR1AO95602 1720 aaPredicted RBP15.73■□□□□ 0.11
LSG1-207ENST00000475763 IQGAP1P46940 1657 aa15.73■□□□□ 0.11
LSG1-207ENST00000475763 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
LSG1-207ENST00000475763 CEBPAP49715 358 aaPredicted RBP15.72■□□□□ 0.11
LSG1-207ENST00000475763 HDGFP51858 240 aaKnown RBP15.72■□□□□ 0.11
LSG1-207ENST00000475763 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
LSG1-207ENST00000475763 L3MBTL3Q96JM7 780 aaPredicted RBP15.72■□□□□ 0.11
LSG1-207ENST00000475763 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
LSG1-207ENST00000475763 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.11
LSG1-207ENST00000475763 EFCAB3Q8N7B9 438 aa15.71■□□□□ 0.11
LSG1-207ENST00000475763 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
LSG1-207ENST00000475763 C14orf93Q9H972 538 aaKnown RBP15.71■□□□□ 0.11
LSG1-207ENST00000475763 SCAF11Q99590 1463 aaKnown RBP15.7■□□□□ 0.1
LSG1-207ENST00000475763 DIEXFQ68CQ4 756 aaKnown RBP15.69■□□□□ 0.1
LSG1-207ENST00000475763 ZNF142P52746 1687 aaPredicted RBP15.68■□□□□ 0.1
LSG1-207ENST00000475763 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
LSG1-207ENST00000475763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.68■□□□□ 0.1
LSG1-207ENST00000475763 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
LSG1-207ENST00000475763 C3orf67Q6ZVT6 689 aa15.68■□□□□ 0.1
LSG1-207ENST00000475763 ZFP91Q96JP5 570 aaPredicted RBP15.68■□□□□ 0.1
LSG1-207ENST00000475763 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
LSG1-207ENST00000475763 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
LSG1-207ENST00000475763 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
LSG1-207ENST00000475763 SLIT1O75093 1534 aa15.67■□□□□ 0.1
LSG1-207ENST00000475763 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
LSG1-207ENST00000475763 PTPRMP28827 1452 aa15.66■□□□□ 0.1
LSG1-207ENST00000475763 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
LSG1-207ENST00000475763 ST18O60284 1047 aa15.65■□□□□ 0.1
LSG1-207ENST00000475763 THEMISQ8N1K5 641 aaPredicted RBP15.65■□□□□ 0.1
LSG1-207ENST00000475763 ST20-MTHFSA0A0A6YYL1 179 aa15.64■□□□□ 0.09
LSG1-207ENST00000475763 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
LSG1-207ENST00000475763 PLSCR2Q9NRY7 297 aa15.64■□□□□ 0.09
LSG1-207ENST00000475763 ALKQ9UM73 1620 aa15.64■□□□□ 0.09
LSG1-207ENST00000475763 WASHC2AQ641Q2 1341 aa15.63■□□□□ 0.09
LSG1-207ENST00000475763 CCDC7Q96M83 1385 aa15.62■□□□□ 0.09
LSG1-207ENST00000475763 NUTM2DQ5VT03 806 aaPredicted RBP15.62■□□□□ 0.09
LSG1-207ENST00000475763 SETD1AO15047 1707 aaKnown RBP15.62■□□□□ 0.09
LSG1-207ENST00000475763 NRXN3Q9Y4C0 1643 aa15.61■□□□□ 0.09
LSG1-207ENST00000475763 ASXL1Q8IXJ9 1541 aa15.6■□□□□ 0.09
LSG1-207ENST00000475763 BOLA1Q9Y3E2 137 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms