RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 KDM4AO75164 1064 aa7.92□□□□□ -1.14
RBM39-229ENST00000475651 MAP2K5Q13163 448 aa7.92□□□□□ -1.14
RBM39-229ENST00000475651 FAM160A2Q8N612 972 aaPredicted RBP7.92□□□□□ -1.14
RBM39-229ENST00000475651 NLRP7Q8WX94 980 aa7.92□□□□□ -1.14
RBM39-229ENST00000475651 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
RBM39-229ENST00000475651 GPR37O15354 613 aa7.91□□□□□ -1.14
RBM39-229ENST00000475651 AVPP01185 164 aa7.91□□□□□ -1.14
RBM39-229ENST00000475651 TREML4Q6UXN2 200 aa7.91□□□□□ -1.14
RBM39-229ENST00000475651 SNIP1Q8TAD8 396 aaKnown RBP7.91□□□□□ -1.14
RBM39-229ENST00000475651 TOR4AQ9NXH8 423 aa7.91□□□□□ -1.14
RBM39-229ENST00000475651 WNT7AO00755 349 aa7.9□□□□□ -1.14
RBM39-229ENST00000475651 TRIM32Q13049 653 aa7.9□□□□□ -1.14
RBM39-229ENST00000475651 CCDC24Q8N4L8 307 aa7.9□□□□□ -1.14
RBM39-229ENST00000475651 SENP2Q9HC62 589 aa7.9□□□□□ -1.14
RBM39-229ENST00000475651 PRDM9Q9NQV7 894 aa7.9□□□□□ -1.14
RBM39-229ENST00000475651 RNF19BQ6ZMZ0 732 aa7.89□□□□□ -1.15
RBM39-229ENST00000475651 STK17AQ9UEE5 414 aa7.89□□□□□ -1.15
RBM39-229ENST00000475651 MINK1Q8N4C8 1332 aaPredicted RBP7.88□□□□□ -1.15
RBM39-229ENST00000475651 CD46P15529 392 aa7.88□□□□□ -1.15
RBM39-229ENST00000475651 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
RBM39-229ENST00000475651 NUTM1Q86Y26 1132 aa7.88□□□□□ -1.15
RBM39-229ENST00000475651 POTECB2RU33 542 aa7.87□□□□□ -1.15
RBM39-229ENST00000475651 CLCN1P35523 988 aa7.87□□□□□ -1.15
RBM39-229ENST00000475651 MMP16P51512 607 aa7.87□□□□□ -1.15
RBM39-229ENST00000475651 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
RBM39-229ENST00000475651 IRF6O14896 467 aa7.86□□□□□ -1.15
RBM39-229ENST00000475651 MDM2Q00987 491 aaPredicted RBP7.86□□□□□ -1.15
RBM39-229ENST00000475651 WNT7BP56706 349 aa7.85□□□□□ -1.15
RBM39-229ENST00000475651 KIFC2Q96AC6 838 aa7.85□□□□□ -1.15
RBM39-229ENST00000475651 WFS1O76024 890 aa7.84□□□□□ -1.15
RBM39-229ENST00000475651 DXOO77932 396 aaKnown RBP7.84□□□□□ -1.15
RBM39-229ENST00000475651 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.15
RBM39-229ENST00000475651 GPCPD1Q9NPB8 672 aa7.84□□□□□ -1.15
RBM39-229ENST00000475651 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
RBM39-229ENST00000475651 INSM1Q01101 510 aaPredicted RBP7.83□□□□□ -1.16
RBM39-229ENST00000475651 HOXA2O43364 376 aa7.82□□□□□ -1.16
RBM39-229ENST00000475651 RC3H1Q5TC82 1133 aaKnown RBP7.81□□□□□ -1.16
RBM39-229ENST00000475651 VSIG10Q8N0Z9 540 aa7.81□□□□□ -1.16
RBM39-229ENST00000475651 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
RBM39-229ENST00000475651 SMPD1P17405 629 aa7.8□□□□□ -1.16
RBM39-229ENST00000475651 JUNDP17535 347 aa7.8□□□□□ -1.16
RBM39-229ENST00000475651 RETREG3Q86VR2 466 aa7.8□□□□□ -1.16
RBM39-229ENST00000475651 EHBP1Q8NDI1 1231 aa7.8□□□□□ -1.16
RBM39-229ENST00000475651 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
RBM39-229ENST00000475651 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
RBM39-229ENST00000475651 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
RBM39-229ENST00000475651 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
RBM39-229ENST00000475651 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
RBM39-229ENST00000475651 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
RBM39-229ENST00000475651 DACH1Q9UI36 760 aa7.78□□□□□ -1.16
RBM39-229ENST00000475651 FAM181BA6NEQ2 426 aa7.77□□□□□ -1.17
RBM39-229ENST00000475651 J3QL48 77 aa7.77□□□□□ -1.17
RBM39-229ENST00000475651 TRIM47Q96LD4 638 aa7.77□□□□□ -1.17
RBM39-229ENST00000475651 FDX1P10109 184 aa7.76□□□□□ -1.17
RBM39-229ENST00000475651 MS4A1P11836 297 aa7.76□□□□□ -1.17
RBM39-229ENST00000475651 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
RBM39-229ENST00000475651 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
RBM39-229ENST00000475651 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
RBM39-229ENST00000475651 SPDYE5A6NIY4 337 aa7.74□□□□□ -1.17
RBM39-229ENST00000475651 CCNYL3P0C7X3 344 aa7.74□□□□□ -1.17
RBM39-229ENST00000475651 DIXDC1Q155Q3 683 aa7.74□□□□□ -1.17
RBM39-229ENST00000475651 HPS1Q92902 700 aa7.74□□□□□ -1.17
RBM39-229ENST00000475651 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
RBM39-229ENST00000475651 WIPF1O43516 503 aa7.73□□□□□ -1.17
RBM39-229ENST00000475651 HLA-CQ95604 372 aa7.73□□□□□ -1.17
RBM39-229ENST00000475651 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
RBM39-229ENST00000475651 CAPN5O15484 640 aaPredicted RBP7.72□□□□□ -1.17
RBM39-229ENST00000475651 GUCA2AQ02747 115 aa7.72□□□□□ -1.17
RBM39-229ENST00000475651 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
RBM39-229ENST00000475651 SSTR3P32745 418 aaPredicted RBP7.71□□□□□ -1.18
RBM39-229ENST00000475651 PTPRNQ16849 979 aa7.71□□□□□ -1.18
RBM39-229ENST00000475651 SKOR1P84550 965 aa7.7□□□□□ -1.18
RBM39-229ENST00000475651 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
RBM39-229ENST00000475651 SYMPKQ92797 1274 aaKnown RBP7.7□□□□□ -1.18
RBM39-229ENST00000475651 MTMR2Q13614 643 aa7.69□□□□□ -1.18
RBM39-229ENST00000475651 VARSP26640 1264 aaKnown RBP7.68□□□□□ -1.18
RBM39-229ENST00000475651 SCARF1Q14162 830 aa7.68□□□□□ -1.18
RBM39-229ENST00000475651 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
RBM39-229ENST00000475651 IRF7Q92985 503 aa7.68□□□□□ -1.18
RBM39-229ENST00000475651 DESI1Q6ICB0 168 aa7.67□□□□□ -1.18
RBM39-229ENST00000475651 UNC93B1Q9H1C4 597 aa7.67□□□□□ -1.18
RBM39-229ENST00000475651 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
RBM39-229ENST00000475651 CTHP32929 405 aa7.66□□□□□ -1.18
RBM39-229ENST00000475651 KCNH2Q12809 1159 aa7.66□□□□□ -1.18
RBM39-229ENST00000475651 SUZ12Q15022 739 aaKnown RBP7.66□□□□□ -1.18
RBM39-229ENST00000475651 PRR7Q8TB68 274 aa7.66□□□□□ -1.18
RBM39-229ENST00000475651 SPIRE2Q8WWL2 714 aa7.66□□□□□ -1.18
RBM39-229ENST00000475651 EVA1BQ9NVM1 165 aa7.66□□□□□ -1.18
RBM39-229ENST00000475651 SH3BP2P78314 561 aa7.65□□□□□ -1.18
RBM39-229ENST00000475651 FAM174AQ8TBP5 190 aa7.65□□□□□ -1.18
RBM39-229ENST00000475651 GJA5P36382 358 aa7.64□□□□□ -1.19
RBM39-229ENST00000475651 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
RBM39-229ENST00000475651 PTCRAQ6ISU1 281 aaPredicted RBP7.64□□□□□ -1.19
RBM39-229ENST00000475651 ZNF511Q8NB15 262 aa7.64□□□□□ -1.19
RBM39-229ENST00000475651 BAP1Q92560 729 aa7.64□□□□□ -1.19
RBM39-229ENST00000475651 SIAH2O43255 324 aa7.63□□□□□ -1.19
RBM39-229ENST00000475651 UPP2O95045 317 aa7.63□□□□□ -1.19
RBM39-229ENST00000475651 AGERQ15109 404 aa7.63□□□□□ -1.19
RBM39-229ENST00000475651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.63□□□□□ -1.19
RBM39-229ENST00000475651 PCDHGC3Q9UN70 934 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms