RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	PCDHB3	Q9Y5E6	796 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553	SPDYE5	A6NIY4	337 aa		11.11	□□□□□ -0.63
USP37-208	ENST00000475553	APLP1	P51693	650 aa		11.11	□□□□□ -0.63
USP37-208	ENST00000475553	MTMR2	Q13614	643 aa		11.11	□□□□□ -0.63
USP37-208	ENST00000475553	CABLES1	Q8TDN4	633 aa		11.11	□□□□□ -0.63
USP37-208	ENST00000475553	NR1I2	O75469	434 aa		11.1	□□□□□ -0.63
USP37-208	ENST00000475553	HRC	P23327	699 aa		11.1	□□□□□ -0.63
USP37-208	ENST00000475553	NYAP1	Q6ZVC0	841 aa		11.1	□□□□□ -0.63
USP37-208	ENST00000475553	PCDHGC3	Q9UN70	934 aa		11.1	□□□□□ -0.63
USP37-208	ENST00000475553	AP1G2	O75843	785 aa		11.09	□□□□□ -0.63
USP37-208	ENST00000475553	PTPN5	P54829	565 aa		11.09	□□□□□ -0.63
USP37-208	ENST00000475553	MORN1	Q5T089	497 aa		11.09	□□□□□ -0.63
USP37-208	ENST00000475553	TSC1	Q92574	1164 aa		11.09	□□□□□ -0.63
USP37-208	ENST00000475553	RTL5	Q5HYW3	569 aa	Predicted RBP	11.08	□□□□□ -0.64
USP37-208	ENST00000475553	BANK1	Q8NDB2	785 aa		11.08	□□□□□ -0.64
USP37-208	ENST00000475553	MYT1L	Q9UL68	1186 aa		11.08	□□□□□ -0.64
USP37-208	ENST00000475553	SLC27A5	Q9Y2P5	690 aa		11.08	□□□□□ -0.64
USP37-208	ENST00000475553	HELB	Q8NG08	1087 aa	Predicted RBP	11.07	□□□□□ -0.64
USP37-208	ENST00000475553	UBTF	P17480	764 aa	Known RBP	11.06	□□□□□ -0.64
USP37-208	ENST00000475553	APBB1	O00213	710 aa		11.05	□□□□□ -0.64
USP37-208	ENST00000475553	RAD21	O60216	631 aa		11.04	□□□□□ -0.64
USP37-208	ENST00000475553	FMNL1	O95466	1100 aa	Predicted RBP	11.03	□□□□□ -0.64
USP37-208	ENST00000475553	COPS2	P61201	443 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	MCM6	Q14566	821 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	BLOC1S3	Q6QNY0	202 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	RETREG3	Q86VR2	466 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	SCUBE3	Q8IX30	993 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	SYMPK	Q92797	1274 aa	Known RBP	11.03	□□□□□ -0.64
USP37-208	ENST00000475553	ZMYND15	Q9H091	742 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	PRM3	Q9NNZ6	103 aa		11.03	□□□□□ -0.64
USP37-208	ENST00000475553	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.02	□□□□□ -0.65
USP37-208	ENST00000475553	PRR7	Q8TB68	274 aa		11.01	□□□□□ -0.65
USP37-208	ENST00000475553	USB1	Q9BQ65	265 aa	Known RBP	11	□□□□□ -0.65
USP37-208	ENST00000475553	SNRK	Q9NRH2	765 aa		11	□□□□□ -0.65
USP37-208	ENST00000475553	SALL2	Q9Y467	1007 aa	Predicted RBP	11	□□□□□ -0.65
USP37-208	ENST00000475553	USP17L8	P0C7I0	530 aa		10.99	□□□□□ -0.65
USP37-208	ENST00000475553	CFAP99	D6REC4	459 aa		10.98	□□□□□ -0.65
USP37-208	ENST00000475553	BRICD5	Q6PL45	260 aa		10.98	□□□□□ -0.65
USP37-208	ENST00000475553	RNF19B	Q6ZMZ0	732 aa		10.98	□□□□□ -0.65
USP37-208	ENST00000475553	CTDSPL2	Q05D32	466 aa		10.96	□□□□□ -0.65
USP37-208	ENST00000475553	WWC1	Q8IX03	1113 aa		10.95	□□□□□ -0.66
USP37-208	ENST00000475553	SPSB2	Q99619	263 aa		10.95	□□□□□ -0.66
USP37-208	ENST00000475553	MTR	Q99707	1265 aa		10.95	□□□□□ -0.66
USP37-208	ENST00000475553	HCST	Q9UBK5	93 aa		10.95	□□□□□ -0.66
USP37-208	ENST00000475553	DESI1	Q6ICB0	168 aa		10.94	□□□□□ -0.66
USP37-208	ENST00000475553	IL21	Q9HBE4	155 aa		10.94	□□□□□ -0.66
USP37-208	ENST00000475553	ZPR1	O75312	459 aa		10.93	□□□□□ -0.66
USP37-208	ENST00000475553	MTMR14	Q8NCE2	650 aa		10.93	□□□□□ -0.66
USP37-208	ENST00000475553	CLUAP1	Q96AJ1	413 aa		10.93	□□□□□ -0.66
USP37-208	ENST00000475553	THAP11	Q96EK4	314 aa		10.92	□□□□□ -0.66
USP37-208	ENST00000475553		A6NJR5	290 aa		10.91	□□□□□ -0.66
USP37-208	ENST00000475553	SUPT5H	O00267	1087 aa	Known RBP	10.91	□□□□□ -0.66
USP37-208	ENST00000475553	SOCS7	O14512	581 aa		10.91	□□□□□ -0.66
USP37-208	ENST00000475553	ADH1B	P00325	375 aa		10.9	□□□□□ -0.66
USP37-208	ENST00000475553	PNMA1	Q8ND90	353 aa		10.9	□□□□□ -0.66
USP37-208	ENST00000475553	LRRN4	Q8WUT4	740 aa		10.9	□□□□□ -0.66
USP37-208	ENST00000475553	JUND	P17535	347 aa		10.89	□□□□□ -0.67
USP37-208	ENST00000475553	MSS51	Q4VC12	460 aa		10.89	□□□□□ -0.67
USP37-208	ENST00000475553	NDUFB9	Q9Y6M9	179 aa		10.89	□□□□□ -0.67
USP37-208	ENST00000475553	TJAP1	Q5JTD0	557 aa		10.88	□□□□□ -0.67
USP37-208	ENST00000475553	LYPD8	Q6UX82	237 aa		10.88	□□□□□ -0.67
USP37-208	ENST00000475553	PROSER2	Q86WR7	435 aa	Predicted RBP	10.88	□□□□□ -0.67
USP37-208	ENST00000475553	POM121	Q96HA1	1249 aa		10.88	□□□□□ -0.67
USP37-208	ENST00000475553	GDPD2	Q9HCC8	539 aa		10.88	□□□□□ -0.67
USP37-208	ENST00000475553	COG6	Q9Y2V7	657 aa		10.88	□□□□□ -0.67
USP37-208	ENST00000475553	TLL1	O43897	1013 aa		10.87	□□□□□ -0.67
USP37-208	ENST00000475553	ABL2	P42684	1182 aa		10.87	□□□□□ -0.67
USP37-208	ENST00000475553	PER1	O15534	1290 aa	Predicted RBP	10.86	□□□□□ -0.67
USP37-208	ENST00000475553	CTH	P32929	405 aa		10.86	□□□□□ -0.67
USP37-208	ENST00000475553	ZNF516	Q92618	1163 aa		10.86	□□□□□ -0.67
USP37-208	ENST00000475553	PTPRN	Q16849	979 aa		10.85	□□□□□ -0.67
USP37-208	ENST00000475553	FAM160A2	Q8N612	972 aa	Predicted RBP	10.85	□□□□□ -0.67
USP37-208	ENST00000475553	SLC6A16	Q9GZN6	736 aa		10.85	□□□□□ -0.67
USP37-208	ENST00000475553	HMX1	Q9NP08	348 aa	Predicted RBP	10.85	□□□□□ -0.67
USP37-208	ENST00000475553	TRAK2	O60296	914 aa		10.84	□□□□□ -0.67
USP37-208	ENST00000475553	KCNC4	Q03721	635 aa		10.84	□□□□□ -0.67
USP37-208	ENST00000475553	NR6A1	Q15406	480 aa		10.84	□□□□□ -0.67
USP37-208	ENST00000475553	TBC1D2B	Q9UPU7	963 aa		10.84	□□□□□ -0.67
USP37-208	ENST00000475553	NUDT12	Q9BQG2	462 aa		10.83	□□□□□ -0.68
USP37-208	ENST00000475553	DXO	O77932	396 aa	Known RBP	10.82	□□□□□ -0.68
USP37-208	ENST00000475553	CCNYL3	P0C7X3	344 aa		10.82	□□□□□ -0.68
USP37-208	ENST00000475553	CCDC24	Q8N4L8	307 aa		10.82	□□□□□ -0.68
USP37-208	ENST00000475553	GJD4	Q96KN9	370 aa	Predicted RBP	10.82	□□□□□ -0.68
USP37-208	ENST00000475553	PRDM9	Q9NQV7	894 aa		10.82	□□□□□ -0.68
USP37-208	ENST00000475553	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.82	□□□□□ -0.68
USP37-208	ENST00000475553	MMP16	P51512	607 aa		10.81	□□□□□ -0.68
USP37-208	ENST00000475553	TRIM34	Q9BYJ4	488 aa		10.8	□□□□□ -0.68
USP37-208	ENST00000475553	GGCX	P38435	758 aa		10.79	□□□□□ -0.68
USP37-208	ENST00000475553	NKX2-3	Q8TAU0	364 aa		10.79	□□□□□ -0.68
USP37-208	ENST00000475553	S1PR4	O95977	384 aa		10.78	□□□□□ -0.68
USP37-208	ENST00000475553	WASHC4	Q2M389	1173 aa		10.78	□□□□□ -0.68
USP37-208	ENST00000475553	ARMC2	Q8NEN0	867 aa		10.78	□□□□□ -0.68
USP37-208	ENST00000475553	EPS8L1	Q8TE68	723 aa		10.78	□□□□□ -0.68
USP37-208	ENST00000475553	EVA1B	Q9NVM1	165 aa		10.78	□□□□□ -0.68
USP37-208	ENST00000475553	KCNH2	Q12809	1159 aa		10.77	□□□□□ -0.69
USP37-208	ENST00000475553	MAP10	Q9P2G4	905 aa		10.77	□□□□□ -0.69
USP37-208	ENST00000475553	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.77	□□□□□ -0.69
USP37-208	ENST00000475553	ITGBL1	O95965	494 aa	Predicted RBP	10.76	□□□□□ -0.69
USP37-208	ENST00000475553	ARID3C	A6NKF2	412 aa		10.75	□□□□□ -0.69
USP37-208	ENST00000475553	F12	P00748	615 aa	Predicted RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms