RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
SMC5-203ENST00000475540 POLR3EQ9NVU0 708 aa14.41□□□□□ -0.1
SMC5-203ENST00000475540 C6orf229H3BNL8 230 aa14.4□□□□□ -0.1
SMC5-203ENST00000475540 A0A0G2JS52 829 aa14.39□□□□□ -0.11
SMC5-203ENST00000475540 SKIV2LQ15477 1246 aaKnown RBP14.39□□□□□ -0.11
SMC5-203ENST00000475540 USB1Q9BQ65 265 aaKnown RBP14.39□□□□□ -0.11
SMC5-203ENST00000475540 SLC6A16Q9GZN6 736 aa14.39□□□□□ -0.11
SMC5-203ENST00000475540 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
SMC5-203ENST00000475540 CLK2P49760 499 aaKnown RBP14.38□□□□□ -0.11
SMC5-203ENST00000475540 SH3D19Q5HYK7 790 aa14.38□□□□□ -0.11
SMC5-203ENST00000475540 PPP1R18Q6NYC8 613 aa14.38□□□□□ -0.11
SMC5-203ENST00000475540 SYMPKQ92797 1274 aaKnown RBP14.38□□□□□ -0.11
SMC5-203ENST00000475540 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
SMC5-203ENST00000475540 LIMD1Q9UGP4 676 aa14.37□□□□□ -0.11
SMC5-203ENST00000475540 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
SMC5-203ENST00000475540 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
SMC5-203ENST00000475540 S1PR4O95977 384 aa14.35□□□□□ -0.11
SMC5-203ENST00000475540 MTMR2Q13614 643 aa14.35□□□□□ -0.11
SMC5-203ENST00000475540 TUSC1Q2TAM9 212 aa14.35□□□□□ -0.11
SMC5-203ENST00000475540 FAM160A2Q8N612 972 aaPredicted RBP14.35□□□□□ -0.11
SMC5-203ENST00000475540 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
SMC5-203ENST00000475540 MSS51Q4VC12 460 aa14.34□□□□□ -0.11
SMC5-203ENST00000475540 RETREG3Q86VR2 466 aa14.34□□□□□ -0.11
SMC5-203ENST00000475540 PRPF38BQ5VTL8 546 aaKnown RBP14.33□□□□□ -0.12
SMC5-203ENST00000475540 ZBTB3Q9H5J0 574 aa14.33□□□□□ -0.12
SMC5-203ENST00000475540 GOPCQ9HD26 462 aa14.33□□□□□ -0.12
SMC5-203ENST00000475540 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
SMC5-203ENST00000475540 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
SMC5-203ENST00000475540 HRCP23327 699 aa14.31□□□□□ -0.12
SMC5-203ENST00000475540 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
SMC5-203ENST00000475540 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
SMC5-203ENST00000475540 PROCA1Q8NCQ7 364 aaPredicted RBP14.29□□□□□ -0.12
SMC5-203ENST00000475540 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
SMC5-203ENST00000475540 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
SMC5-203ENST00000475540 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
SMC5-203ENST00000475540 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
SMC5-203ENST00000475540 LILRB3O75022 631 aa14.27□□□□□ -0.13
SMC5-203ENST00000475540 QPCTQ16769 361 aa14.27□□□□□ -0.13
SMC5-203ENST00000475540 PRR7Q8TB68 274 aa14.27□□□□□ -0.13
SMC5-203ENST00000475540 PRDM9Q9NQV7 894 aa14.27□□□□□ -0.13
SMC5-203ENST00000475540 ANKLE1Q8NAG6 615 aa14.26□□□□□ -0.13
SMC5-203ENST00000475540 MMP16P51512 607 aa14.25□□□□□ -0.13
SMC5-203ENST00000475540 JUNDP17535 347 aa14.24□□□□□ -0.13
SMC5-203ENST00000475540 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMC5-203ENST00000475540 DXOO77932 396 aaKnown RBP14.23□□□□□ -0.13
SMC5-203ENST00000475540 RGS20O76081 388 aa14.22□□□□□ -0.13
SMC5-203ENST00000475540 RTL5Q5HYW3 569 aaPredicted RBP14.21□□□□□ -0.13
SMC5-203ENST00000475540 DESI1Q6ICB0 168 aa14.21□□□□□ -0.13
SMC5-203ENST00000475540 FCF1Q9Y324 198 aaKnown RBP14.21□□□□□ -0.13
SMC5-203ENST00000475540 CFAP99D6REC4 459 aa14.19□□□□□ -0.14
SMC5-203ENST00000475540 TSC1Q92574 1164 aa14.19□□□□□ -0.14
SMC5-203ENST00000475540 PPP2R2DQ66LE6 453 aa14.18□□□□□ -0.14
SMC5-203ENST00000475540 CCDC24Q8N4L8 307 aa14.17□□□□□ -0.14
SMC5-203ENST00000475540 HELBQ8NG08 1087 aaPredicted RBP14.16□□□□□ -0.14
SMC5-203ENST00000475540 NUDT12Q9BQG2 462 aa14.15□□□□□ -0.14
SMC5-203ENST00000475540 PRKD2Q9BZL6 878 aa14.15□□□□□ -0.14
SMC5-203ENST00000475540 PTPRNQ16849 979 aa14.14□□□□□ -0.15
SMC5-203ENST00000475540 ZBTB24O43167 697 aaPredicted RBP14.13□□□□□ -0.15
SMC5-203ENST00000475540 SLC19A1P41440 591 aa14.13□□□□□ -0.15
SMC5-203ENST00000475540 LYPD8Q6UX82 237 aa14.13□□□□□ -0.15
SMC5-203ENST00000475540 FBXO31Q5XUX0 539 aaPredicted RBP14.12□□□□□ -0.15
SMC5-203ENST00000475540 V9GY48 417 aaPredicted RBP14.12□□□□□ -0.15
SMC5-203ENST00000475540 CCNYL3P0C7X3 344 aa14.11□□□□□ -0.15
SMC5-203ENST00000475540 PLA2G2CQ5R387 149 aa14.11□□□□□ -0.15
SMC5-203ENST00000475540 RFC5P40937 340 aa14.1□□□□□ -0.15
SMC5-203ENST00000475540 TMEM132AQ24JP5 1023 aa14.09□□□□□ -0.15
SMC5-203ENST00000475540 LIAT1Q6ZQX7 453 aa14.09□□□□□ -0.15
SMC5-203ENST00000475540 EVA1BQ9NVM1 165 aa14.09□□□□□ -0.15
SMC5-203ENST00000475540 AP1G2O75843 785 aa14.08□□□□□ -0.16
SMC5-203ENST00000475540 RPIAP49247 311 aa14.08□□□□□ -0.16
SMC5-203ENST00000475540 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
SMC5-203ENST00000475540 CTDSPL2Q05D32 466 aa14.07□□□□□ -0.16
SMC5-203ENST00000475540 TMEM259Q4ZIN3 620 aa14.07□□□□□ -0.16
SMC5-203ENST00000475540 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
SMC5-203ENST00000475540 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
SMC5-203ENST00000475540 EMID1Q96A84 441 aaPredicted RBP14.06□□□□□ -0.16
SMC5-203ENST00000475540 CTHP32929 405 aa14.05□□□□□ -0.16
SMC5-203ENST00000475540 SPRYD7Q5W111 196 aa14.04□□□□□ -0.16
SMC5-203ENST00000475540 PTCRAQ6ISU1 281 aaPredicted RBP14.03□□□□□ -0.16
SMC5-203ENST00000475540 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
SMC5-203ENST00000475540 F12P00748 615 aaPredicted RBP13.99□□□□□ -0.17
SMC5-203ENST00000475540 TRIM32Q13049 653 aa13.99□□□□□ -0.17
SMC5-203ENST00000475540 UNC93B1Q9H1C4 597 aa13.99□□□□□ -0.17
SMC5-203ENST00000475540 MAP10Q9P2G4 905 aa13.99□□□□□ -0.17
SMC5-203ENST00000475540 ZNF697Q5TEC3 545 aa13.98□□□□□ -0.17
SMC5-203ENST00000475540 LRRN4Q8WUT4 740 aa13.98□□□□□ -0.17
SMC5-203ENST00000475540 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
SMC5-203ENST00000475540 BANK1Q8NDB2 785 aa13.96□□□□□ -0.17
SMC5-203ENST00000475540 ARMC2Q8NEN0 867 aa13.93□□□□□ -0.18
SMC5-203ENST00000475540 WNT7BP56706 349 aa13.92□□□□□ -0.18
SMC5-203ENST00000475540 BAP1Q92560 729 aa13.92□□□□□ -0.18
SMC5-203ENST00000475540 NR6A1Q15406 480 aa13.91□□□□□ -0.18
SMC5-203ENST00000475540 FOXC1Q12948 553 aa13.89□□□□□ -0.19
SMC5-203ENST00000475540 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
SMC5-203ENST00000475540 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
SMC5-203ENST00000475540 SH3BP2P78314 561 aa13.87□□□□□ -0.19
SMC5-203ENST00000475540 ZNF511Q8NB15 262 aa13.87□□□□□ -0.19
SMC5-203ENST00000475540 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
SMC5-203ENST00000475540 SKOR1P84550 965 aa13.86□□□□□ -0.19
SMC5-203ENST00000475540 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms