RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
ARHGEF39-203ENST00000475323 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
ARHGEF39-203ENST00000475323 MTHFSP49914 203 aa17.27■□□□□ 0.36
ARHGEF39-203ENST00000475323 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
ARHGEF39-203ENST00000475323 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
ARHGEF39-203ENST00000475323 SHPRHQ149N8 1683 aa17.27■□□□□ 0.35
ARHGEF39-203ENST00000475323 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
ARHGEF39-203ENST00000475323 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
ARHGEF39-203ENST00000475323 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
ARHGEF39-203ENST00000475323 MAP3K4Q9Y6R4 1608 aa17.26■□□□□ 0.35
ARHGEF39-203ENST00000475323 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
ARHGEF39-203ENST00000475323 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
ARHGEF39-203ENST00000475323 TET3O43151 1660 aa17.25■□□□□ 0.35
ARHGEF39-203ENST00000475323 KANK1Q14678 1352 aa17.25■□□□□ 0.35
ARHGEF39-203ENST00000475323 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF39-203ENST00000475323 GZF1Q9H116 711 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF39-203ENST00000475323 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
ARHGEF39-203ENST00000475323 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF39-203ENST00000475323 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
ARHGEF39-203ENST00000475323 DEPDC5O75140 1603 aa17.22■□□□□ 0.35
ARHGEF39-203ENST00000475323 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF39-203ENST00000475323 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
ARHGEF39-203ENST00000475323 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
ARHGEF39-203ENST00000475323 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
ARHGEF39-203ENST00000475323 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
ARHGEF39-203ENST00000475323 NOS1P29475 1434 aa17.21■□□□□ 0.34
ARHGEF39-203ENST00000475323 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF39-203ENST00000475323 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
ARHGEF39-203ENST00000475323 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF39-203ENST00000475323 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
ARHGEF39-203ENST00000475323 CFAP65Q6ZU64 1925 aaKnown RBP17.2■□□□□ 0.34
ARHGEF39-203ENST00000475323 MYOM2P54296 1465 aa17.19■□□□□ 0.34
ARHGEF39-203ENST00000475323 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
ARHGEF39-203ENST00000475323 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 PANK2Q9BZ23 570 aa17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
ARHGEF39-203ENST00000475323 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
ARHGEF39-203ENST00000475323 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
ARHGEF39-203ENST00000475323 KIF1BO60333 1816 aa17.17■□□□□ 0.34
ARHGEF39-203ENST00000475323 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
ARHGEF39-203ENST00000475323 MCM4P33991 863 aa17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
ARHGEF39-203ENST00000475323 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
ARHGEF39-203ENST00000475323 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
ARHGEF39-203ENST00000475323 MROH1Q8NDA8 1641 aa17.15■□□□□ 0.34
ARHGEF39-203ENST00000475323 TRIM27P14373 513 aa17.15■□□□□ 0.34
ARHGEF39-203ENST00000475323 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
ARHGEF39-203ENST00000475323 AAMPQ13685 434 aa17.14■□□□□ 0.34
ARHGEF39-203ENST00000475323 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.34
ARHGEF39-203ENST00000475323 CCDC27Q2M243 656 aa17.14■□□□□ 0.34
ARHGEF39-203ENST00000475323 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
ARHGEF39-203ENST00000475323 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
ARHGEF39-203ENST00000475323 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
ARHGEF39-203ENST00000475323 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
ARHGEF39-203ENST00000475323 MYO3AQ8NEV4 1616 aa17.13■□□□□ 0.33
ARHGEF39-203ENST00000475323 FANCAO15360 1455 aa17.13■□□□□ 0.33
ARHGEF39-203ENST00000475323 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
ARHGEF39-203ENST00000475323 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 QRICH2Q9H0J4 1663 aa17.12■□□□□ 0.33
ARHGEF39-203ENST00000475323 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 FSD2A1L4K1 749 aa17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 TRAK2O60296 914 aa17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 EFCAB6Q5THR3 1501 aa17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
ARHGEF39-203ENST00000475323 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
ARHGEF39-203ENST00000475323 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
ARHGEF39-203ENST00000475323 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
ARHGEF39-203ENST00000475323 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
ARHGEF39-203ENST00000475323 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
ARHGEF39-203ENST00000475323 CD109Q6YHK3 1445 aa17.08■□□□□ 0.33
ARHGEF39-203ENST00000475323 GGT6Q6P531 493 aa17.08■□□□□ 0.32
ARHGEF39-203ENST00000475323 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
ARHGEF39-203ENST00000475323 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
ARHGEF39-203ENST00000475323 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
ARHGEF39-203ENST00000475323 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
ARHGEF39-203ENST00000475323 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
ARHGEF39-203ENST00000475323 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
ARHGEF39-203ENST00000475323 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
ARHGEF39-203ENST00000475323 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
ARHGEF39-203ENST00000475323 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
ARHGEF39-203ENST00000475323 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 ANKRD36BQ8N2N9 1353 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms