RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 QPCTQ16769 361 aa10.35□□□□□ -0.75
SRRM1-210ENST00000474843 TJAP1Q5JTD0 557 aa10.35□□□□□ -0.75
SRRM1-210ENST00000474843 SCUBE3Q8IX30 993 aa10.35□□□□□ -0.75
SRRM1-210ENST00000474843 ZNF516Q92618 1163 aa10.35□□□□□ -0.75
SRRM1-210ENST00000474843 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
SRRM1-210ENST00000474843 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
SRRM1-210ENST00000474843 FBXO31Q5XUX0 539 aaPredicted RBP10.34□□□□□ -0.75
SRRM1-210ENST00000474843 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.33□□□□□ -0.76
SRRM1-210ENST00000474843 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
SRRM1-210ENST00000474843 ZPR1O75312 459 aa10.32□□□□□ -0.76
SRRM1-210ENST00000474843 HRCP23327 699 aa10.32□□□□□ -0.76
SRRM1-210ENST00000474843 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-210ENST00000474843 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-210ENST00000474843 GJA5P36382 358 aa10.31□□□□□ -0.76
SRRM1-210ENST00000474843 MTMR2Q13614 643 aa10.31□□□□□ -0.76
SRRM1-210ENST00000474843 Q3C1V9 767 aa10.31□□□□□ -0.76
SRRM1-210ENST00000474843 NUTM2DQ5VT03 806 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-210ENST00000474843 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-210ENST00000474843 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
SRRM1-210ENST00000474843 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
SRRM1-210ENST00000474843 THAP11Q96EK4 314 aa10.3□□□□□ -0.76
SRRM1-210ENST00000474843 LILRB3O75022 631 aa10.29□□□□□ -0.76
SRRM1-210ENST00000474843 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
SRRM1-210ENST00000474843 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
SRRM1-210ENST00000474843 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
SRRM1-210ENST00000474843 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
SRRM1-210ENST00000474843 TSC1Q92574 1164 aa10.28□□□□□ -0.76
SRRM1-210ENST00000474843 SPSB2Q99619 263 aa10.28□□□□□ -0.76
SRRM1-210ENST00000474843 A0A0G2JS52 829 aa10.27□□□□□ -0.77
SRRM1-210ENST00000474843 KCNC4Q03721 635 aa10.27□□□□□ -0.77
SRRM1-210ENST00000474843 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.77
SRRM1-210ENST00000474843 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
SRRM1-210ENST00000474843 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
SRRM1-210ENST00000474843 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
SRRM1-210ENST00000474843 RETREG3Q86VR2 466 aa10.26□□□□□ -0.77
SRRM1-210ENST00000474843 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
SRRM1-210ENST00000474843 USB1Q9BQ65 265 aaKnown RBP10.26□□□□□ -0.77
SRRM1-210ENST00000474843 ADH1BP00325 375 aa10.25□□□□□ -0.77
SRRM1-210ENST00000474843 RFC5P40937 340 aa10.25□□□□□ -0.77
SRRM1-210ENST00000474843 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
SRRM1-210ENST00000474843 PPP2R2DQ66LE6 453 aa10.24□□□□□ -0.77
SRRM1-210ENST00000474843 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
SRRM1-210ENST00000474843 SPDYE5A6NIY4 337 aa10.22□□□□□ -0.77
SRRM1-210ENST00000474843 S1PR4O95977 384 aa10.22□□□□□ -0.77
SRRM1-210ENST00000474843 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
SRRM1-210ENST00000474843 AP1G2O75843 785 aa10.21□□□□□ -0.77
SRRM1-210ENST00000474843 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
SRRM1-210ENST00000474843 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
SRRM1-210ENST00000474843 JUNDP17535 347 aa10.19□□□□□ -0.78
SRRM1-210ENST00000474843 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
SRRM1-210ENST00000474843 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
SRRM1-210ENST00000474843 CTDSPL2Q05D32 466 aa10.17□□□□□ -0.78
SRRM1-210ENST00000474843 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
SRRM1-210ENST00000474843 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
SRRM1-210ENST00000474843 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
SRRM1-210ENST00000474843 USP17L8P0C7I0 530 aa10.16□□□□□ -0.78
SRRM1-210ENST00000474843 MMP16P51512 607 aa10.14□□□□□ -0.79
SRRM1-210ENST00000474843 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
SRRM1-210ENST00000474843 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
SRRM1-210ENST00000474843 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
SRRM1-210ENST00000474843 CCDC24Q8N4L8 307 aa10.13□□□□□ -0.79
SRRM1-210ENST00000474843 FCF1Q9Y324 198 aaKnown RBP10.13□□□□□ -0.79
SRRM1-210ENST00000474843 RNF223E7ERA6 249 aa10.12□□□□□ -0.79
SRRM1-210ENST00000474843 DESI1Q6ICB0 168 aa10.12□□□□□ -0.79
SRRM1-210ENST00000474843 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
SRRM1-210ENST00000474843 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
SRRM1-210ENST00000474843 PTPRNQ16849 979 aa10.11□□□□□ -0.79
SRRM1-210ENST00000474843 LYPD8Q6UX82 237 aa10.11□□□□□ -0.79
SRRM1-210ENST00000474843 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
SRRM1-210ENST00000474843 GGCXP38435 758 aa10.1□□□□□ -0.79
SRRM1-210ENST00000474843 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
SRRM1-210ENST00000474843 MAP10Q9P2G4 905 aa10.1□□□□□ -0.79
SRRM1-210ENST00000474843 CCNYL3P0C7X3 344 aa10.09□□□□□ -0.79
SRRM1-210ENST00000474843 CTHP32929 405 aa10.09□□□□□ -0.79
SRRM1-210ENST00000474843 MCM6Q14566 821 aa10.09□□□□□ -0.79
SRRM1-210ENST00000474843 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
SRRM1-210ENST00000474843 MTMR14Q8NCE2 650 aa10.08□□□□□ -0.8
SRRM1-210ENST00000474843 PLA2G2CQ5R387 149 aa10.07□□□□□ -0.8
SRRM1-210ENST00000474843 EPS8L1Q8TE68 723 aa10.07□□□□□ -0.8
SRRM1-210ENST00000474843 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-210ENST00000474843 NR6A1Q15406 480 aa10.06□□□□□ -0.8
SRRM1-210ENST00000474843 ANKLE1Q8NAG6 615 aa10.06□□□□□ -0.8
SRRM1-210ENST00000474843 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-210ENST00000474843 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
SRRM1-210ENST00000474843 FLIIQ13045 1269 aa10.03□□□□□ -0.8
SRRM1-210ENST00000474843 GJD4Q96KN9 370 aaPredicted RBP10.03□□□□□ -0.8
SRRM1-210ENST00000474843 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
SRRM1-210ENST00000474843 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
SRRM1-210ENST00000474843 UNC93B1Q9H1C4 597 aa10.02□□□□□ -0.81
SRRM1-210ENST00000474843 ABCC9O60706 1549 aa10.01□□□□□ -0.81
SRRM1-210ENST00000474843 LAPTM4AQ15012 233 aa10□□□□□ -0.81
SRRM1-210ENST00000474843 LINC01559Q495D7 138 aa10□□□□□ -0.81
SRRM1-210ENST00000474843 POM121Q96HA1 1249 aa10□□□□□ -0.81
SRRM1-210ENST00000474843 TBC1D2BQ9UPU7 963 aa10□□□□□ -0.81
SRRM1-210ENST00000474843 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
SRRM1-210ENST00000474843 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-210ENST00000474843 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-210ENST00000474843 Q6ZNB5 142 aa9.98□□□□□ -0.81
SRRM1-210ENST00000474843 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
SRRM1-210ENST00000474843 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms