RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PARD3Q8TEW0 1356 aa10.5□□□□□ -0.73
CCDC93-208ENST00000474546 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
CCDC93-208ENST00000474546 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
CCDC93-208ENST00000474546 CCDC184Q52MB2 194 aa10.49□□□□□ -0.73
CCDC93-208ENST00000474546 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
CCDC93-208ENST00000474546 TMEM94Q12767 1356 aa10.49□□□□□ -0.73
CCDC93-208ENST00000474546 NINLQ9Y2I6 1382 aa10.49□□□□□ -0.73
CCDC93-208ENST00000474546 ANKRD50Q9ULJ7 1429 aa10.49□□□□□ -0.73
CCDC93-208ENST00000474546 ARHGEF5Q12774 1597 aa10.48□□□□□ -0.73
CCDC93-208ENST00000474546 MYO5CQ9NQX4 1742 aa10.48□□□□□ -0.73
CCDC93-208ENST00000474546 C8orf37Q96NL8 207 aa10.48□□□□□ -0.73
CCDC93-208ENST00000474546 TNRQ92752 1358 aa10.48□□□□□ -0.73
CCDC93-208ENST00000474546 GSE1Q14687 1217 aa10.47□□□□□ -0.73
CCDC93-208ENST00000474546 CARD11Q9BXL7 1154 aa10.47□□□□□ -0.73
CCDC93-208ENST00000474546 TRPC5Q9UL62 973 aaPredicted RBP10.47□□□□□ -0.73
CCDC93-208ENST00000474546 ABCC3O15438 1527 aa10.47□□□□□ -0.73
CCDC93-208ENST00000474546 AHDC1Q5TGY3 1603 aaPredicted RBP10.47□□□□□ -0.73
CCDC93-208ENST00000474546 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
CCDC93-208ENST00000474546 GPRASP1Q5JY77 1395 aa10.46□□□□□ -0.74
CCDC93-208ENST00000474546 NUP153P49790 1475 aaKnown RBP10.46□□□□□ -0.74
CCDC93-208ENST00000474546 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.74
CCDC93-208ENST00000474546 NLRP1Q9C000 1473 aa10.46□□□□□ -0.74
CCDC93-208ENST00000474546 MSH6P52701 1360 aa10.45□□□□□ -0.74
CCDC93-208ENST00000474546 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
CCDC93-208ENST00000474546 RSPH6AQ9H0K4 717 aa10.45□□□□□ -0.74
CCDC93-208ENST00000474546 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
CCDC93-208ENST00000474546 GPATCH8Q9UKJ3 1502 aaKnown RBP10.43□□□□□ -0.74
CCDC93-208ENST00000474546 RTEL1-TNFRSF6BF6WH68 1400 aa10.43□□□□□ -0.74
CCDC93-208ENST00000474546 UNC13BO14795 1591 aa10.43□□□□□ -0.74
CCDC93-208ENST00000474546 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
CCDC93-208ENST00000474546 TRPM1Q7Z4N2 1603 aa10.42□□□□□ -0.74
CCDC93-208ENST00000474546 DIP2AQ14689 1571 aa10.41□□□□□ -0.74
CCDC93-208ENST00000474546 TSPY4P0CV99 314 aa10.41□□□□□ -0.74
CCDC93-208ENST00000474546 TSPY10P0CW01 314 aa10.41□□□□□ -0.74
CCDC93-208ENST00000474546 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
CCDC93-208ENST00000474546 BECN1Q14457 450 aa10.41□□□□□ -0.74
CCDC93-208ENST00000474546 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
CCDC93-208ENST00000474546 L1TD1Q5T7N2 865 aaKnown RBP10.41□□□□□ -0.74
CCDC93-208ENST00000474546 NPC1L1Q9UHC9 1359 aa10.4□□□□□ -0.74
CCDC93-208ENST00000474546 PRDM15P57071 1507 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-208ENST00000474546 BAG6P46379 1132 aa10.4□□□□□ -0.74
CCDC93-208ENST00000474546 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-208ENST00000474546 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
CCDC93-208ENST00000474546 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-208ENST00000474546 NUP155O75694 1391 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 MAST1Q9Y2H9 1570 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 GLIPR1L2Q4G1C9 344 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 TNS4Q8IZW8 715 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 EXOC6Q8TAG9 804 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 USP21Q9UK80 565 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 PRAG1Q86YV5 1406 aa10.39□□□□□ -0.75
CCDC93-208ENST00000474546 CAMTA1Q9Y6Y1 1673 aa10.38□□□□□ -0.75
CCDC93-208ENST00000474546 TMF1P82094 1093 aa10.38□□□□□ -0.75
CCDC93-208ENST00000474546 GGT6Q6P531 493 aa10.38□□□□□ -0.75
CCDC93-208ENST00000474546 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
CCDC93-208ENST00000474546 ARHGAP23Q9P227 1491 aa10.37□□□□□ -0.75
CCDC93-208ENST00000474546 KCNA6P17658 529 aa10.37□□□□□ -0.75
CCDC93-208ENST00000474546 SPHKAPQ2M3C7 1700 aa10.37□□□□□ -0.75
CCDC93-208ENST00000474546 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
CCDC93-208ENST00000474546 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
CCDC93-208ENST00000474546 CDC42BPAQ5VT25 1732 aa10.36□□□□□ -0.75
CCDC93-208ENST00000474546 PIK3C2GO75747 1445 aa10.36□□□□□ -0.75
CCDC93-208ENST00000474546 ATRNO75882 1429 aa10.36□□□□□ -0.75
CCDC93-208ENST00000474546 COL13A1Q5TAT6 717 aaPredicted RBP10.36□□□□□ -0.75
CCDC93-208ENST00000474546 UPF2Q9HAU5 1272 aaKnown RBP10.36□□□□□ -0.75
CCDC93-208ENST00000474546 ARHGAP5Q13017 1502 aa10.36□□□□□ -0.75
CCDC93-208ENST00000474546 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 KDM5AP29375 1690 aaKnown RBP10.35□□□□□ -0.75
CCDC93-208ENST00000474546 ST20-MTHFSA0A0A6YYL1 179 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 HSPA6P17066 643 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
CCDC93-208ENST00000474546 UBE2Q2Q8WVN8 375 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 POLR3GLQ9BT43 218 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
CCDC93-208ENST00000474546 CGNL1Q0VF96 1302 aa10.34□□□□□ -0.75
CCDC93-208ENST00000474546 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
CCDC93-208ENST00000474546 PTMSP20962 102 aa10.34□□□□□ -0.75
CCDC93-208ENST00000474546 WDR43Q15061 677 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC93-208ENST00000474546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.758e-8■□□□□ 11.1
CCDC93-208ENST00000474546 NKTRP30414 1462 aaKnown RBP10.34□□□□□ -0.75
CCDC93-208ENST00000474546 ERBINQ96RT1 1412 aa10.33□□□□□ -0.76
CCDC93-208ENST00000474546 IQGAP3Q86VI3 1631 aa10.33□□□□□ -0.76
CCDC93-208ENST00000474546 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
CCDC93-208ENST00000474546 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
CCDC93-208ENST00000474546 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
CCDC93-208ENST00000474546 LRRC59Q96AG4 307 aaKnown RBP10.33□□□□□ -0.76
CCDC93-208ENST00000474546 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
CCDC93-208ENST00000474546 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
CCDC93-208ENST00000474546 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
CCDC93-208ENST00000474546 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
CCDC93-208ENST00000474546 SPON1Q9HCB6 807 aa10.31□□□□□ -0.76
CCDC93-208ENST00000474546 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
CCDC93-208ENST00000474546 DCAF11Q8TEB1 546 aa10.3□□□□□ -0.76
CCDC93-208ENST00000474546 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
CCDC93-208ENST00000474546 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
CCDC93-208ENST00000474546 E9PSI1 815 aa10.29□□□□□ -0.76
CCDC93-208ENST00000474546 TXNDC2Q86VQ3 553 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms