RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 PRR20AP86496 221 aa10.14□□□□□ -0.79
FN1-219ENST00000474036 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
FN1-219ENST00000474036 PKD2L1Q9P0L9 805 aa10.14□□□□□ -0.79
FN1-219ENST00000474036 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
FN1-219ENST00000474036 MYT1Q01538 1121 aa10.13□□□□□ -0.79
FN1-219ENST00000474036 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
FN1-219ENST00000474036 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
FN1-219ENST00000474036 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
FN1-219ENST00000474036 FOXC1Q12948 553 aa10.1□□□□□ -0.79
FN1-219ENST00000474036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.799e-9■■□□□ 12.8
FN1-219ENST00000474036 POTECB2RU33 542 aa10.09□□□□□ -0.79
FN1-219ENST00000474036 PKDCCQ504Y2 493 aa10.09□□□□□ -0.79
FN1-219ENST00000474036 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
FN1-219ENST00000474036 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
FN1-219ENST00000474036 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
FN1-219ENST00000474036 FAM187AA6NFU0 413 aa10.07□□□□□ -0.8
FN1-219ENST00000474036 KDM4AO75164 1064 aa10.07□□□□□ -0.8
FN1-219ENST00000474036 DGAT1O75907 488 aa10.07□□□□□ -0.8
FN1-219ENST00000474036 GUCA2AQ02747 115 aa10.07□□□□□ -0.8
FN1-219ENST00000474036 MSS51Q4VC12 460 aa10.07□□□□□ -0.8
FN1-219ENST00000474036 RPIAP49247 311 aa10.06□□□□□ -0.8
FN1-219ENST00000474036 ST8SIA5O15466 376 aa10.05□□□□□ -0.8
FN1-219ENST00000474036 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
FN1-219ENST00000474036 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
FN1-219ENST00000474036 HOXA2O43364 376 aa10.03□□□□□ -0.8
FN1-219ENST00000474036 MMP16P51512 607 aa10.03□□□□□ -0.8
FN1-219ENST00000474036 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
FN1-219ENST00000474036 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
FN1-219ENST00000474036 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
FN1-219ENST00000474036 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
FN1-219ENST00000474036 TOR4AQ9NXH8 423 aa10.02□□□□□ -0.81
FN1-219ENST00000474036 NCAPD3P42695 1498 aa10.02□□□□□ -0.81
FN1-219ENST00000474036 USB1Q9BQ65 265 aaKnown RBP10.01□□□□□ -0.81
FN1-219ENST00000474036 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
FN1-219ENST00000474036 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
FN1-219ENST00000474036 CD2BP2O95400 341 aaKnown RBP10□□□□□ -0.81
FN1-219ENST00000474036 Q3C1V9 767 aa10□□□□□ -0.81
FN1-219ENST00000474036 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
FN1-219ENST00000474036 DACH1Q9UI36 760 aa10□□□□□ -0.81
FN1-219ENST00000474036 HMGXB3Q12766 1538 aa10□□□□□ -0.81
FN1-219ENST00000474036 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
FN1-219ENST00000474036 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 CLCN1P35523 988 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 BCANQ96GW7 911 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 RIMBP3CA6NJZ7 1639 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 RIMBP3BA6NNM3 1639 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 RIMBP3Q9UFD9 1639 aa9.99□□□□□ -0.81
FN1-219ENST00000474036 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
FN1-219ENST00000474036 USP46P62068 366 aa9.97□□□□□ -0.81
FN1-219ENST00000474036 PCDHGC3Q9UN70 934 aa9.97□□□□□ -0.81
FN1-219ENST00000474036 TRIM32Q13049 653 aa9.96□□□□□ -0.82
FN1-219ENST00000474036 BARGINQ6ZT62 677 aa9.96□□□□□ -0.82
FN1-219ENST00000474036 ZMYND10O75800 440 aa9.95□□□□□ -0.82
FN1-219ENST00000474036 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
FN1-219ENST00000474036 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
FN1-219ENST00000474036 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
FN1-219ENST00000474036 CYP4X1Q8N118 509 aa9.94□□□□□ -0.82
FN1-219ENST00000474036 AVPP01185 164 aa9.93□□□□□ -0.82
FN1-219ENST00000474036 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
FN1-219ENST00000474036 SKOR1P84550 965 aa9.93□□□□□ -0.82
FN1-219ENST00000474036 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
FN1-219ENST00000474036 KRI1Q8N9T8 703 aaKnown RBP9.93□□□□□ -0.82
FN1-219ENST00000474036 WNT7AO00755 349 aa9.92□□□□□ -0.82
FN1-219ENST00000474036 SMPD1P17405 629 aa9.92□□□□□ -0.82
FN1-219ENST00000474036 NDUFV2P19404 249 aa9.92□□□□□ -0.82
FN1-219ENST00000474036 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
FN1-219ENST00000474036 MRGPRX2Q96LB1 330 aa9.92□□□□□ -0.82
FN1-219ENST00000474036 PTCRAQ6ISU1 281 aaPredicted RBP9.91□□□□□ -0.82
FN1-219ENST00000474036 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
FN1-219ENST00000474036 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
FN1-219ENST00000474036 J3QL48 77 aa9.9□□□□□ -0.82
FN1-219ENST00000474036 JUNDP17535 347 aa9.9□□□□□ -0.82
FN1-219ENST00000474036 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.83
FN1-219ENST00000474036 TTC24A2A3L6 582 aaPredicted RBP9.89□□□□□ -0.83
FN1-219ENST00000474036 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
FN1-219ENST00000474036 FDX1P10109 184 aa9.89□□□□□ -0.83
FN1-219ENST00000474036 PDS5BQ9NTI5 1447 aa9.89□□□□□ -0.83
FN1-219ENST00000474036 WDR62O43379 1518 aa9.88□□□□□ -0.83
FN1-219ENST00000474036 AMHR2Q16671 573 aa9.88□□□□□ -0.83
FN1-219ENST00000474036 TTLL12Q14166 644 aaPredicted RBP9.87□□□□□ -0.83
FN1-219ENST00000474036 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
FN1-219ENST00000474036 RETREG3Q86VR2 466 aa9.87□□□□□ -0.83
FN1-219ENST00000474036 SNIP1Q8TAD8 396 aaKnown RBP9.87□□□□□ -0.83
FN1-219ENST00000474036 GMPR2Q9P2T1 348 aaKnown RBP9.87□□□□□ -0.83
FN1-219ENST00000474036 AXIN1O15169 862 aa9.86□□□□□ -0.83
FN1-219ENST00000474036 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
FN1-219ENST00000474036 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
FN1-219ENST00000474036 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
FN1-219ENST00000474036 PARP9Q8IXQ6 854 aa9.84□□□□□ -0.83
FN1-219ENST00000474036 HPS1Q92902 700 aa9.84□□□□□ -0.83
FN1-219ENST00000474036 NUDT12Q9BQG2 462 aa9.84□□□□□ -0.83
FN1-219ENST00000474036 MS4A1P11836 297 aa9.83□□□□□ -0.84
FN1-219ENST00000474036 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
FN1-219ENST00000474036 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
FN1-219ENST00000474036 TRIM66O15016 1216 aa9.82□□□□□ -0.84
FN1-219ENST00000474036 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
FN1-219ENST00000474036 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
FN1-219ENST00000474036 WNT7BP56706 349 aa9.81□□□□□ -0.84
FN1-219ENST00000474036 PCDHB15Q9Y5E8 787 aa9.81□□□□□ -0.84
FN1-219ENST00000474036 SIAH2O43255 324 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms