RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MORN1Q5T089 497 aa5.1□□□□□ -1.59
CALD1-216ENST00000473714 KCTD17Q8N5Z5 321 aa5.1□□□□□ -1.59
CALD1-216ENST00000473714 THAP11Q96EK4 314 aa5.1□□□□□ -1.59
CALD1-216ENST00000473714 REPIN1Q9BWE0 567 aaKnown RBP5.1□□□□□ -1.59
CALD1-216ENST00000473714 H3BM21 787 aa5.09□□□□□ -1.59
CALD1-216ENST00000473714 TRIM32Q13049 653 aa5.09□□□□□ -1.59
CALD1-216ENST00000473714 OATP04181 439 aa5.08□□□□□ -1.6
CALD1-216ENST00000473714 ATP6V1AP38606 617 aa5.08□□□□□ -1.6
CALD1-216ENST00000473714 VEGFBP49765 207 aa5.08□□□□□ -1.6
CALD1-216ENST00000473714 KCNMA1Q12791 1236 aa5.08□□□□□ -1.6
CALD1-216ENST00000473714 SALL2Q9Y467 1007 aaPredicted RBP5.08□□□□□ -1.6
CALD1-216ENST00000473714 NUTM2FA1L443 756 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 FECHP22830 423 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 FUT2Q10981 343 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 BRICD5Q6PL45 260 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 RDH13Q8NBN7 331 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 PRDM9Q9NQV7 894 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 SLC27A5Q9Y2P5 690 aa5.07□□□□□ -1.6
CALD1-216ENST00000473714 ERBB4Q15303 1308 aa5.06□□□□□ -1.6
CALD1-216ENST00000473714 TMEM151AQ8N4L1 468 aa5.06□□□□□ -1.6
CALD1-216ENST00000473714 NACADO15069 1562 aa5.06□□□□□ -1.6
CALD1-216ENST00000473714 ALDH1A1P00352 501 aa5.05□□□□□ -1.6
CALD1-216ENST00000473714 MSS51Q4VC12 460 aa5.05□□□□□ -1.6
CALD1-216ENST00000473714 RC3H1Q5TC82 1133 aaKnown RBP5.05□□□□□ -1.6
CALD1-216ENST00000473714 PXYLP1Q8TE99 480 aa5.05□□□□□ -1.6
CALD1-216ENST00000473714 CAPN5O15484 640 aaPredicted RBP5.04□□□□□ -1.6
CALD1-216ENST00000473714 MLLT3P42568 568 aaPredicted RBP5.04□□□□□ -1.6
CALD1-216ENST00000473714 BBXQ8WY36 941 aaPredicted RBP5.04□□□□□ -1.6
CALD1-216ENST00000473714 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
CALD1-216ENST00000473714 ERCC6Q03468 1493 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 FCHSD2O94868 740 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 GDF11O95390 407 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 BMP1P13497 986 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 WNT7BP56706 349 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 TRIM46Q7Z4K8 759 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 SPRYD3Q8NCJ5 442 aa5.03□□□□□ -1.6
CALD1-216ENST00000473714 DDX11L8A8MPP1 907 aa5.02□□□□□ -1.61
CALD1-216ENST00000473714 GRIPAP1Q4V328 841 aa5.02□□□□□ -1.61
CALD1-216ENST00000473714 DAXXQ9UER7 740 aaPredicted RBP5.02□□□□□ -1.61
CALD1-216ENST00000473714 SHROOM4Q9ULL8 1493 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 GCGRP47871 477 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 MMP16P51512 607 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 RASSF7Q02833 373 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 Q3C1V9 767 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 RNF19BQ6ZMZ0 732 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 METTL3Q86U44 580 aaKnown RBP5.01□□□□□ -1.61
CALD1-216ENST00000473714 CCDC24Q8N4L8 307 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 WASF2Q9Y6W5 498 aa5.01□□□□□ -1.61
CALD1-216ENST00000473714 GSK3AP49840 483 aa5□□□□□ -1.61
CALD1-216ENST00000473714 RNF225M0QZC1 329 aaPredicted RBP4.99□□□□□ -1.61
CALD1-216ENST00000473714 SKOR1P84550 965 aa4.99□□□□□ -1.61
CALD1-216ENST00000473714 SULF1Q8IWU6 871 aa4.99□□□□□ -1.61
CALD1-216ENST00000473714 ZFP42Q96MM3 310 aa4.99□□□□□ -1.61
CALD1-216ENST00000473714 VSIG8P0DPA2 414 aa4.98□□□□□ -1.61
CALD1-216ENST00000473714 SCARF1Q14162 830 aa4.98□□□□□ -1.61
CALD1-216ENST00000473714 EHBP1Q8NDI1 1231 aa4.98□□□□□ -1.61
CALD1-216ENST00000473714 ARHGEF1Q92888 912 aaKnown RBP4.98□□□□□ -1.61
CALD1-216ENST00000473714 CFAP44Q96MT7 982 aa4.98□□□□□ -1.61
CALD1-216ENST00000473714 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.98□□□□□ -1.61
CALD1-216ENST00000473714 DXOO77932 396 aaKnown RBP4.97□□□□□ -1.61
CALD1-216ENST00000473714 PAXIP1Q6ZW49 1069 aaPredicted RBP4.97□□□□□ -1.61
CALD1-216ENST00000473714 USB1Q9BQ65 265 aaKnown RBP4.97□□□□□ -1.61
CALD1-216ENST00000473714 SOCS7O14512 581 aa4.96□□□□□ -1.62
CALD1-216ENST00000473714 SIAH2O43255 324 aa4.96□□□□□ -1.62
CALD1-216ENST00000473714 IGHA1P01876 353 aa4.95□□□□□ -1.62
CALD1-216ENST00000473714 HAP1P54257 671 aaPredicted RBP4.95□□□□□ -1.62
CALD1-216ENST00000473714 HIC1Q14526 733 aa4.95□□□□□ -1.62
CALD1-216ENST00000473714 GPAT2Q6NUI2 795 aa4.95□□□□□ -1.62
CALD1-216ENST00000473714 ADAMTS8Q9UP79 889 aa4.95□□□□□ -1.62
CALD1-216ENST00000473714 PLCB2Q00722 1185 aa4.94□□□□□ -1.62
CALD1-216ENST00000473714 XP32Q5T750 250 aa4.94□□□□□ -1.62
CALD1-216ENST00000473714 MRPL14Q6P1L8 145 aaKnown RBP4.93□□□□□ -1.62
CALD1-216ENST00000473714 PURBQ96QR8 312 aaKnown RBP4.93□□□□□ -1.62
CALD1-216ENST00000473714 SOBPA7XYQ1 873 aa4.92□□□□□ -1.62
CALD1-216ENST00000473714 MAN1A2O60476 641 aa4.92□□□□□ -1.62
CALD1-216ENST00000473714 KCNV2Q8TDN2 545 aa4.92□□□□□ -1.62
CALD1-216ENST00000473714 NLRP7Q8WX94 980 aa4.92□□□□□ -1.62
CALD1-216ENST00000473714 DNMT3AQ9Y6K1 912 aaPredicted RBP4.92□□□□□ -1.62
CALD1-216ENST00000473714 LMTK3Q96Q04 1460 aa4.91□□□□□ -1.62
CALD1-216ENST00000473714 RIMBP3CA6NJZ7 1639 aa4.9□□□□□ -1.62
CALD1-216ENST00000473714 RIMBP3BA6NNM3 1639 aa4.9□□□□□ -1.62
CALD1-216ENST00000473714 RIMBP3Q9UFD9 1639 aa4.9□□□□□ -1.62
CALD1-216ENST00000473714 PLEKHG3A1L390 1219 aa4.9□□□□□ -1.63
CALD1-216ENST00000473714 PPFIA3O75145 1194 aa4.9□□□□□ -1.63
CALD1-216ENST00000473714 IRS1P35568 1242 aa4.9□□□□□ -1.63
CALD1-216ENST00000473714 FOXK2Q01167 660 aa4.9□□□□□ -1.63
CALD1-216ENST00000473714 GNPATO15228 680 aa4.89□□□□□ -1.63
CALD1-216ENST00000473714 JUNDP17535 347 aa4.89□□□□□ -1.63
CALD1-216ENST00000473714 CNTNAP3BQ96NU0 1288 aa4.89□□□□□ -1.63
CALD1-216ENST00000473714 CNTNAP3Q9BZ76 1288 aa4.89□□□□□ -1.63
CALD1-216ENST00000473714 KDM4AO75164 1064 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 WDR4P57081 412 aaKnown RBP4.88□□□□□ -1.63
CALD1-216ENST00000473714 SH3BP2P78314 561 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 NNTQ13423 1086 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 PTCRAQ6ISU1 281 aaPredicted RBP4.88□□□□□ -1.63
CALD1-216ENST00000473714 KANK3Q6NY19 840 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 FBXO41Q8TF61 875 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 NUDT12Q9BQG2 462 aa4.88□□□□□ -1.63
CALD1-216ENST00000473714 ADH1CP00326 375 aa4.87□□□□□ -1.63
CALD1-216ENST00000473714 MARSP56192 900 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms