RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ADGRB2O60241 1585 aa27.01■■□□□ 1.91
CTDSP1-207ENST00000473420 CARD11Q9BXL7 1154 aa26.99■■□□□ 1.91
CTDSP1-207ENST00000473420 POGKQ9P215 609 aa26.99■■□□□ 1.91
CTDSP1-207ENST00000473420 EIF3AQ14152 1382 aaKnown RBP26.98■■□□□ 1.91
CTDSP1-207ENST00000473420 QRICH2Q9H0J4 1663 aa26.97■■□□□ 1.91
CTDSP1-207ENST00000473420 TOM1O60784 492 aa26.96■■□□□ 1.91
CTDSP1-207ENST00000473420 CADPS2Q86UW7 1296 aa26.95■■□□□ 1.9
CTDSP1-207ENST00000473420 FMN2Q9NZ56 1722 aa26.93■■□□□ 1.9
CTDSP1-207ENST00000473420 UBAP1LF5GYI3 381 aa26.93■■□□□ 1.9
CTDSP1-207ENST00000473420 ATF3P18847 181 aa26.93■■□□□ 1.9
CTDSP1-207ENST00000473420 CENPJQ9HC77 1338 aaPredicted RBP26.92■■□□□ 1.9
CTDSP1-207ENST00000473420 SAFB2Q14151 953 aaKnown RBP eCLIP26.91■■□□□ 1.9
CTDSP1-207ENST00000473420 FBXO41Q8TF61 875 aa26.89■■□□□ 1.9
CTDSP1-207ENST00000473420 MST1RQ04912 1400 aa26.89■■□□□ 1.89
CTDSP1-207ENST00000473420 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
CTDSP1-207ENST00000473420 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
CTDSP1-207ENST00000473420 SLAIN2Q9P270 581 aa26.85■■□□□ 1.89
CTDSP1-207ENST00000473420 USP47Q96K76 1375 aa26.84■■□□□ 1.89
CTDSP1-207ENST00000473420 ROBO1Q9Y6N7 1651 aa26.84■■□□□ 1.89
CTDSP1-207ENST00000473420 C1orf167Q5SNV9 1468 aa26.82■■□□□ 1.88
CTDSP1-207ENST00000473420 TULP4Q9NRJ4 1543 aa26.81■■□□□ 1.88
CTDSP1-207ENST00000473420 HIRIP3Q9BW71 556 aaPredicted RBP26.81■■□□□ 1.88
CTDSP1-207ENST00000473420 ANKARQ7Z5J8 1434 aa26.81■■□□□ 1.88
CTDSP1-207ENST00000473420 USP32Q8NFA0 1604 aa26.8■■□□□ 1.88
CTDSP1-207ENST00000473420 RGPD8O14715 1765 aaPredicted RBP26.8■■□□□ 1.88
CTDSP1-207ENST00000473420 WASLO00401 505 aaPredicted RBP26.8■■□□□ 1.88
CTDSP1-207ENST00000473420 ITSN1Q15811 1721 aa26.79■■□□□ 1.88
CTDSP1-207ENST00000473420 PIP4K2BP78356 416 aa26.78■■□□□ 1.88
CTDSP1-207ENST00000473420 KIF1AQ12756 1690 aa26.76■■□□□ 1.87
CTDSP1-207ENST00000473420 SCAF1Q9H7N4 1312 aaKnown RBP26.75■■□□□ 1.87
CTDSP1-207ENST00000473420 ST20-MTHFSA0A0A6YYL1 179 aa26.75■■□□□ 1.87
CTDSP1-207ENST00000473420 SLC24A1O60721 1099 aa26.75■■□□□ 1.87
CTDSP1-207ENST00000473420 TOPAZ1Q8N9V7 1692 aa26.75■■□□□ 1.87
CTDSP1-207ENST00000473420 EVC2Q86UK5 1308 aa26.74■■□□□ 1.87
CTDSP1-207ENST00000473420 ATP7BP35670 1465 aa26.74■■□□□ 1.87
CTDSP1-207ENST00000473420 NHSL1Q5SYE7 1610 aa26.73■■□□□ 1.87
CTDSP1-207ENST00000473420 CDK19Q9BWU1 502 aa26.73■■□□□ 1.87
CTDSP1-207ENST00000473420 ZEB1P37275 1124 aaPredicted RBP26.72■■□□□ 1.87
CTDSP1-207ENST00000473420 EIF4G2P78344 907 aaKnown RBP eCLIP26.72■■□□□ 1.87
CTDSP1-207ENST00000473420 BRINP3Q76B58 766 aa26.72■■□□□ 1.87
CTDSP1-207ENST00000473420 TESK2Q96S53 571 aa26.72■■□□□ 1.87
CTDSP1-207ENST00000473420 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
CTDSP1-207ENST00000473420 NUTM2FA1L443 756 aa26.69■■□□□ 1.86
CTDSP1-207ENST00000473420 PRR36Q9H6K5 1346 aa26.68■■□□□ 1.86
CTDSP1-207ENST00000473420 PHLPP1O60346 1717 aa26.68■■□□□ 1.86
CTDSP1-207ENST00000473420 ORAI2Q96SN7 254 aa26.68■■□□□ 1.86
CTDSP1-207ENST00000473420 SRPK2P78362 688 aaKnown RBP26.67■■□□□ 1.86
CTDSP1-207ENST00000473420 ESCO1Q5FWF5 840 aa26.67■■□□□ 1.86
CTDSP1-207ENST00000473420 NUDT16Q96DE0 195 aaKnown RBP26.66■■□□□ 1.86
CTDSP1-207ENST00000473420 HSPA5P11021 654 aaKnown RBP26.65■■□□□ 1.86
CTDSP1-207ENST00000473420 PUS7Q96PZ0 661 aaKnown RBP26.64■■□□□ 1.86
CTDSP1-207ENST00000473420 CABP2Q9NPB3 220 aa26.63■■□□□ 1.85
CTDSP1-207ENST00000473420 PHF8Q9UPP1 1060 aa26.63■■□□□ 1.85
CTDSP1-207ENST00000473420 COL16A1Q07092 1604 aaPredicted RBP26.62■■□□□ 1.85
CTDSP1-207ENST00000473420 ATAD2Q6PL18 1390 aa26.62■■□□□ 1.85
CTDSP1-207ENST00000473420 TMF1P82094 1093 aa26.62■■□□□ 1.85
CTDSP1-207ENST00000473420 CCDC61Q9Y6R9 512 aa26.62■■□□□ 1.85
CTDSP1-207ENST00000473420 ILDR1Q86SU0 546 aaPredicted RBP26.6■■□□□ 1.85
CTDSP1-207ENST00000473420 DISP3Q9P2K9 1392 aa26.59■■□□□ 1.85
CTDSP1-207ENST00000473420 PPIP5K1Q6PFW1 1433 aa26.59■■□□□ 1.85
CTDSP1-207ENST00000473420 NPHP3Q7Z494 1330 aa26.59■■□□□ 1.85
CTDSP1-207ENST00000473420 HSPA1LP34931 641 aa26.57■■□□□ 1.84
CTDSP1-207ENST00000473420 PXDNQ92626 1479 aa26.56■■□□□ 1.84
CTDSP1-207ENST00000473420 PLEKHG3A1L390 1219 aa26.56■■□□□ 1.84
CTDSP1-207ENST00000473420 CDCA8Q53HL2 280 aa26.56■■□□□ 1.84
CTDSP1-207ENST00000473420 POLR3AO14802 1390 aaPredicted RBP26.56■■□□□ 1.84
CTDSP1-207ENST00000473420 SOS2Q07890 1332 aaPredicted RBP26.55■■□□□ 1.84
CTDSP1-207ENST00000473420 AKAP12Q02952 1782 aa26.54■■□□□ 1.84
CTDSP1-207ENST00000473420 FOXO3O43524 673 aa26.54■■□□□ 1.84
CTDSP1-207ENST00000473420 PMFBP1Q8TBY8 1022 aa26.54■■□□□ 1.84
CTDSP1-207ENST00000473420 DDX17Q92841 729 aaKnown RBP26.52■■□□□ 1.84
CTDSP1-207ENST00000473420 TRPM3Q9HCF6 1732 aaPredicted RBP26.52■■□□□ 1.84
CTDSP1-207ENST00000473420 NINLQ9Y2I6 1382 aa26.52■■□□□ 1.84
CTDSP1-207ENST00000473420 SHPRHQ149N8 1683 aa26.5■■□□□ 1.83
CTDSP1-207ENST00000473420 NGDNQ8NEJ9 315 aaKnown RBP26.5■■□□□ 1.83
CTDSP1-207ENST00000473420 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
CTDSP1-207ENST00000473420 MYOM1P52179 1685 aa26.5■■□□□ 1.83
CTDSP1-207ENST00000473420 ACEP12821 1306 aa26.49■■□□□ 1.83
CTDSP1-207ENST00000473420 PSME1Q06323 249 aa26.47■■□□□ 1.83
CTDSP1-207ENST00000473420 KRT28Q7Z3Y7 464 aa26.47■■□□□ 1.83
CTDSP1-207ENST00000473420 LRRC59Q96AG4 307 aaKnown RBP26.47■■□□□ 1.83
CTDSP1-207ENST00000473420 MON2Q7Z3U7 1717 aa26.47■■□□□ 1.83
CTDSP1-207ENST00000473420 SBNO1A3KN83 1393 aa26.46■■□□□ 1.83
CTDSP1-207ENST00000473420 BRD4O60885 1362 aaPredicted RBP26.46■■□□□ 1.83
CTDSP1-207ENST00000473420 CPSF1Q10570 1443 aaKnown RBP26.45■■□□□ 1.82
CTDSP1-207ENST00000473420 JCADQ9P266 1359 aa26.45■■□□□ 1.82
CTDSP1-207ENST00000473420 ALS2Q96Q42 1657 aa26.44■■□□□ 1.82
CTDSP1-207ENST00000473420 CD163L1Q9NR16 1453 aa26.44■■□□□ 1.82
CTDSP1-207ENST00000473420 COL22A1Q8NFW1 1626 aaPredicted RBP26.44■■□□□ 1.82
CTDSP1-207ENST00000473420 NRKQ7Z2Y5 1582 aa26.43■■□□□ 1.82
CTDSP1-207ENST00000473420 TNS3Q68CZ2 1445 aa26.43■■□□□ 1.82
CTDSP1-207ENST00000473420 XPCQ01831 940 aaPredicted RBP26.43■■□□□ 1.82
CTDSP1-207ENST00000473420 ZNF692Q9BU19 519 aaPredicted RBP26.43■■□□□ 1.82
CTDSP1-207ENST00000473420 USP6P35125 1406 aa26.42■■□□□ 1.82
CTDSP1-207ENST00000473420 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
CTDSP1-207ENST00000473420 SPATA31A3Q5VYP0 1347 aa26.4■■□□□ 1.82
CTDSP1-207ENST00000473420 SLC12A5Q9H2X9 1139 aa26.4■■□□□ 1.82
CTDSP1-207ENST00000473420 PNPLA6Q8IY17 1366 aa26.4■■□□□ 1.82
CTDSP1-207ENST00000473420 TERF2IPQ9NYB0 399 aa26.39■■□□□ 1.82
CTDSP1-207ENST00000473420 C11orf95C9JLR9 678 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms