RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 PTCH1Q13635 1447 aa14.19□□□□□ -0.14
BRD3-205ENST00000473349 MPHOSPH9Q99550 1183 aa14.19□□□□□ -0.14
BRD3-205ENST00000473349 STK26Q9P289 416 aa14.18□□□□□ -0.14
BRD3-205ENST00000473349 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
BRD3-205ENST00000473349 AFF2P51816 1311 aa14.17□□□□□ -0.14
BRD3-205ENST00000473349 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
BRD3-205ENST00000473349 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
BRD3-205ENST00000473349 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
BRD3-205ENST00000473349 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
BRD3-205ENST00000473349 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
BRD3-205ENST00000473349 NUTM2FA1L443 756 aa14.16□□□□□ -0.14
BRD3-205ENST00000473349 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
BRD3-205ENST00000473349 ZNF772Q68DY9 489 aaPredicted RBP14.16□□□□□ -0.14
BRD3-205ENST00000473349 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
BRD3-205ENST00000473349 LRRC59Q96AG4 307 aaKnown RBP14.16□□□□□ -0.14
BRD3-205ENST00000473349 PLEKHH1Q9ULM0 1364 aa14.15□□□□□ -0.14
BRD3-205ENST00000473349 XPCQ01831 940 aaPredicted RBP14.14□□□□□ -0.15
BRD3-205ENST00000473349 RXRBP28702 533 aa14.13□□□□□ -0.15
BRD3-205ENST00000473349 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
BRD3-205ENST00000473349 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
BRD3-205ENST00000473349 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
BRD3-205ENST00000473349 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
BRD3-205ENST00000473349 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
BRD3-205ENST00000473349 LAMC1P11047 1609 aa14.11□□□□□ -0.15
BRD3-205ENST00000473349 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
BRD3-205ENST00000473349 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
BRD3-205ENST00000473349 PIK3C2GO75747 1445 aa14.09□□□□□ -0.15
BRD3-205ENST00000473349 FOXO3O43524 673 aa14.09□□□□□ -0.15
BRD3-205ENST00000473349 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
BRD3-205ENST00000473349 ACIN1Q9UKV3 1341 aaKnown RBP14.09□□□□□ -0.15
BRD3-205ENST00000473349 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
BRD3-205ENST00000473349 ANKRD30BQ9BXX2 1392 aa14.09□□□□□ -0.15
BRD3-205ENST00000473349 RGS12O14924 1447 aa14.08□□□□□ -0.15
BRD3-205ENST00000473349 PXDNQ92626 1479 aa14.07□□□□□ -0.16
BRD3-205ENST00000473349 CFAP70Q5T0N1 1121 aa14.07□□□□□ -0.16
BRD3-205ENST00000473349 RAB3GAP2Q9H2M9 1393 aa14.07□□□□□ -0.16
BRD3-205ENST00000473349 TECPR2O15040 1411 aa14.07□□□□□ -0.16
BRD3-205ENST00000473349 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
BRD3-205ENST00000473349 SAFB2Q14151 953 aaKnown RBP eCLIP14.06□□□□□ -0.16
BRD3-205ENST00000473349 ABCC11Q96J66 1382 aa14.06□□□□□ -0.16
BRD3-205ENST00000473349 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
BRD3-205ENST00000473349 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
BRD3-205ENST00000473349 USP21Q9UK80 565 aa14.04□□□□□ -0.16
BRD3-205ENST00000473349 NPHP3Q7Z494 1330 aa14.04□□□□□ -0.16
BRD3-205ENST00000473349 MYOM2P54296 1465 aa14.04□□□□□ -0.16
BRD3-205ENST00000473349 CDK12Q9NYV4 1490 aaPredicted RBP14.04□□□□□ -0.16
BRD3-205ENST00000473349 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
BRD3-205ENST00000473349 C14orf93Q9H972 538 aaKnown RBP14.03□□□□□ -0.16
BRD3-205ENST00000473349 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
BRD3-205ENST00000473349 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
BRD3-205ENST00000473349 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
BRD3-205ENST00000473349 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
BRD3-205ENST00000473349 RGPD8O14715 1765 aaPredicted RBP14.01□□□□□ -0.17
BRD3-205ENST00000473349 FNBP4Q8N3X1 1017 aaPredicted RBP14□□□□□ -0.17
BRD3-205ENST00000473349 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
BRD3-205ENST00000473349 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
BRD3-205ENST00000473349 BCL9LQ86UU0 1499 aa13.99□□□□□ -0.17
BRD3-205ENST00000473349 ATRNO75882 1429 aa13.98□□□□□ -0.17
BRD3-205ENST00000473349 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
BRD3-205ENST00000473349 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
BRD3-205ENST00000473349 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
BRD3-205ENST00000473349 TRPC5Q9UL62 973 aaPredicted RBP13.98□□□□□ -0.17
BRD3-205ENST00000473349 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
BRD3-205ENST00000473349 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
BRD3-205ENST00000473349 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
BRD3-205ENST00000473349 PMFBP1Q8TBY8 1022 aa13.96□□□□□ -0.17
BRD3-205ENST00000473349 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
BRD3-205ENST00000473349 EP400Q96L91 3159 aa13.96□□□□□ -0.17
BRD3-205ENST00000473349 ADGRB1O14514 1584 aa13.96□□□□□ -0.18
BRD3-205ENST00000473349 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
BRD3-205ENST00000473349 USP32Q8NFA0 1604 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 POGKQ9P215 609 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
BRD3-205ENST00000473349 MINK1Q8N4C8 1332 aaPredicted RBP13.94□□□□□ -0.18
BRD3-205ENST00000473349 CAPN15O75808 1086 aa13.93□□□□□ -0.18
BRD3-205ENST00000473349 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
BRD3-205ENST00000473349 PRR36Q9H6K5 1346 aa13.92□□□□□ -0.18
BRD3-205ENST00000473349 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
BRD3-205ENST00000473349 SLIT2O94813 1529 aa13.91□□□□□ -0.18
BRD3-205ENST00000473349 DLC1Q96QB1 1528 aa13.91□□□□□ -0.18
BRD3-205ENST00000473349 PSME1Q06323 249 aa13.91□□□□□ -0.18
BRD3-205ENST00000473349 GJD4Q96KN9 370 aaPredicted RBP13.91□□□□□ -0.18
BRD3-205ENST00000473349 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
BRD3-205ENST00000473349 GLI3P10071 1580 aa13.91□□□□□ -0.18
BRD3-205ENST00000473349 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
BRD3-205ENST00000473349 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
BRD3-205ENST00000473349 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
BRD3-205ENST00000473349 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
BRD3-205ENST00000473349 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
BRD3-205ENST00000473349 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
BRD3-205ENST00000473349 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
BRD3-205ENST00000473349 ANKARQ7Z5J8 1434 aa13.87□□□□□ -0.19
BRD3-205ENST00000473349 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
BRD3-205ENST00000473349 TRPM3Q9HCF6 1732 aaPredicted RBP13.87□□□□□ -0.19
BRD3-205ENST00000473349 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
BRD3-205ENST00000473349 WASLO00401 505 aaPredicted RBP13.86□□□□□ -0.19
BRD3-205ENST00000473349 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms