RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 HSPA2P54652 639 aa13.45□□□□□ -0.26
SMC4-214ENST00000472991 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
SMC4-214ENST00000472991 PLA2R1Q13018 1463 aa13.43□□□□□ -0.26
SMC4-214ENST00000472991 PCGF6Q9BYE7 350 aa13.43□□□□□ -0.26
SMC4-214ENST00000472991 IDI1Q13907 227 aa13.41□□□□□ -0.26
SMC4-214ENST00000472991 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
SMC4-214ENST00000472991 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
SMC4-214ENST00000472991 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
SMC4-214ENST00000472991 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
SMC4-214ENST00000472991 SLIT1O75093 1534 aa13.39□□□□□ -0.27
SMC4-214ENST00000472991 PPLO60437 1756 aa13.38□□□□□ -0.27
SMC4-214ENST00000472991 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
SMC4-214ENST00000472991 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
SMC4-214ENST00000472991 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
SMC4-214ENST00000472991 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
SMC4-214ENST00000472991 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
SMC4-214ENST00000472991 PSEN1P49768 467 aa13.36□□□□□ -0.27
SMC4-214ENST00000472991 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
SMC4-214ENST00000472991 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
SMC4-214ENST00000472991 PLCG2P16885 1265 aa13.35□□□□□ -0.27
SMC4-214ENST00000472991 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
SMC4-214ENST00000472991 TMEM2Q9UHN6 1383 aa13.34□□□□□ -0.27
SMC4-214ENST00000472991 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
SMC4-214ENST00000472991 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
SMC4-214ENST00000472991 ZFYVE9O95405 1425 aa13.33□□□□□ -0.28
SMC4-214ENST00000472991 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
SMC4-214ENST00000472991 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
SMC4-214ENST00000472991 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
SMC4-214ENST00000472991 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
SMC4-214ENST00000472991 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
SMC4-214ENST00000472991 MED14O60244 1454 aa13.3□□□□□ -0.28
SMC4-214ENST00000472991 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
SMC4-214ENST00000472991 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
SMC4-214ENST00000472991 LTKP29376 864 aa13.29□□□□□ -0.28
SMC4-214ENST00000472991 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
SMC4-214ENST00000472991 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
SMC4-214ENST00000472991 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
SMC4-214ENST00000472991 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
SMC4-214ENST00000472991 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
SMC4-214ENST00000472991 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
SMC4-214ENST00000472991 SETD1AO15047 1707 aaKnown RBP13.26□□□□□ -0.29
SMC4-214ENST00000472991 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
SMC4-214ENST00000472991 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
SMC4-214ENST00000472991 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
SMC4-214ENST00000472991 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
SMC4-214ENST00000472991 RGL3Q3MIN7 710 aa13.25□□□□□ -0.29
SMC4-214ENST00000472991 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
SMC4-214ENST00000472991 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
SMC4-214ENST00000472991 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
SMC4-214ENST00000472991 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
SMC4-214ENST00000472991 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMC4-214ENST00000472991 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
SMC4-214ENST00000472991 RPGRIP1LQ68CZ1 1315 aa13.22□□□□□ -0.29
SMC4-214ENST00000472991 MYOM2P54296 1465 aa13.22□□□□□ -0.29
SMC4-214ENST00000472991 LAMC1P11047 1609 aa13.21□□□□□ -0.29
SMC4-214ENST00000472991 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
SMC4-214ENST00000472991 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
SMC4-214ENST00000472991 BCANQ96GW7 911 aa13.2□□□□□ -0.3
SMC4-214ENST00000472991 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
SMC4-214ENST00000472991 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
SMC4-214ENST00000472991 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
SMC4-214ENST00000472991 LTBP4Q8N2S1 1624 aa13.19□□□□□ -0.3
SMC4-214ENST00000472991 ALKQ9UM73 1620 aa13.19□□□□□ -0.3
SMC4-214ENST00000472991 NRXN1Q9ULB1 1477 aa13.18□□□□□ -0.3
SMC4-214ENST00000472991 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
SMC4-214ENST00000472991 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
SMC4-214ENST00000472991 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
SMC4-214ENST00000472991 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
SMC4-214ENST00000472991 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
SMC4-214ENST00000472991 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
SMC4-214ENST00000472991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.39e-8■■■■■ 40.4
SMC4-214ENST00000472991 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
SMC4-214ENST00000472991 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
SMC4-214ENST00000472991 ADGRF5Q8IZF2 1346 aa13.17□□□□□ -0.3
SMC4-214ENST00000472991 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
SMC4-214ENST00000472991 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
SMC4-214ENST00000472991 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
SMC4-214ENST00000472991 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
SMC4-214ENST00000472991 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
SMC4-214ENST00000472991 KNDC1Q76NI1 1749 aa13.15□□□□□ -0.3
SMC4-214ENST00000472991 CPS1P31327 1500 aa13.14□□□□□ -0.31
SMC4-214ENST00000472991 POTEMA6NI47 508 aa13.14□□□□□ -0.31
SMC4-214ENST00000472991 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
SMC4-214ENST00000472991 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
SMC4-214ENST00000472991 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
SMC4-214ENST00000472991 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
SMC4-214ENST00000472991 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
SMC4-214ENST00000472991 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
SMC4-214ENST00000472991 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
SMC4-214ENST00000472991 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
SMC4-214ENST00000472991 METP08581 1390 aa13.12□□□□□ -0.31
SMC4-214ENST00000472991 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
SMC4-214ENST00000472991 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SMC4-214ENST00000472991 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
SMC4-214ENST00000472991 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
SMC4-214ENST00000472991 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
SMC4-214ENST00000472991 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
SMC4-214ENST00000472991 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
SMC4-214ENST00000472991 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
SMC4-214ENST00000472991 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms