RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
HIF3A-206ENST00000472815 FAM135BQ49AJ0 1406 aa19.92■□□□□ 0.78
HIF3A-206ENST00000472815 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
HIF3A-206ENST00000472815 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
HIF3A-206ENST00000472815 MED14O60244 1454 aa19.9■□□□□ 0.78
HIF3A-206ENST00000472815 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
HIF3A-206ENST00000472815 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
HIF3A-206ENST00000472815 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
HIF3A-206ENST00000472815 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
HIF3A-206ENST00000472815 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
HIF3A-206ENST00000472815 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
HIF3A-206ENST00000472815 PARD3Q8TEW0 1356 aa19.86■□□□□ 0.77
HIF3A-206ENST00000472815 NPC1L1Q9UHC9 1359 aa19.86■□□□□ 0.77
HIF3A-206ENST00000472815 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
HIF3A-206ENST00000472815 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
HIF3A-206ENST00000472815 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
HIF3A-206ENST00000472815 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
HIF3A-206ENST00000472815 NPHP4O75161 1426 aaPredicted RBP19.84■□□□□ 0.77
HIF3A-206ENST00000472815 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
HIF3A-206ENST00000472815 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
HIF3A-206ENST00000472815 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
HIF3A-206ENST00000472815 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
HIF3A-206ENST00000472815 CABP2Q9NPB3 220 aa19.82■□□□□ 0.76
HIF3A-206ENST00000472815 ANKRD36BQ8N2N9 1353 aa19.81■□□□□ 0.76
HIF3A-206ENST00000472815 PTCH1Q13635 1447 aa19.81■□□□□ 0.76
HIF3A-206ENST00000472815 CC2D1BQ5T0F9 858 aaKnown RBP19.8■□□□□ 0.76
HIF3A-206ENST00000472815 NLRP13Q86W25 1043 aa19.8■□□□□ 0.76
HIF3A-206ENST00000472815 CDK19Q9BWU1 502 aa19.8■□□□□ 0.76
HIF3A-206ENST00000472815 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
HIF3A-206ENST00000472815 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
HIF3A-206ENST00000472815 PLEKHH1Q9ULM0 1364 aa19.79■□□□□ 0.76
HIF3A-206ENST00000472815 ADGRB2O60241 1585 aa19.79■□□□□ 0.76
HIF3A-206ENST00000472815 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
HIF3A-206ENST00000472815 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
HIF3A-206ENST00000472815 TERF2IPQ9NYB0 399 aa19.79■□□□□ 0.76
HIF3A-206ENST00000472815 AMOTL2Q9Y2J4 779 aa19.78■□□□□ 0.76
HIF3A-206ENST00000472815 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
HIF3A-206ENST00000472815 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
HIF3A-206ENST00000472815 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
HIF3A-206ENST00000472815 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
HIF3A-206ENST00000472815 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
HIF3A-206ENST00000472815 CHD2O14647 1828 aaKnown RBP19.76■□□□□ 0.75
HIF3A-206ENST00000472815 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
HIF3A-206ENST00000472815 HDGFL2Q7Z4V5 671 aaPredicted RBP19.74■□□□□ 0.75
HIF3A-206ENST00000472815 NSD2O96028 1365 aa19.74■□□□□ 0.75
HIF3A-206ENST00000472815 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
HIF3A-206ENST00000472815 ATP7BP35670 1465 aa19.73■□□□□ 0.75
HIF3A-206ENST00000472815 CCDC184Q52MB2 194 aa19.73■□□□□ 0.75
HIF3A-206ENST00000472815 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
HIF3A-206ENST00000472815 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.71■□□□□ 0.75
HIF3A-206ENST00000472815 A0A1W2PP64 1363 aa19.7■□□□□ 0.74
HIF3A-206ENST00000472815 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
HIF3A-206ENST00000472815 CCDC61Q9Y6R9 512 aa19.68■□□□□ 0.74
HIF3A-206ENST00000472815 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
HIF3A-206ENST00000472815 NUDT16Q96DE0 195 aaKnown RBP19.67■□□□□ 0.74
HIF3A-206ENST00000472815 ITSN1Q15811 1721 aa19.66■□□□□ 0.74
HIF3A-206ENST00000472815 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
HIF3A-206ENST00000472815 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
HIF3A-206ENST00000472815 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
HIF3A-206ENST00000472815 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
HIF3A-206ENST00000472815 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
HIF3A-206ENST00000472815 STRCP1A6NGW2 1772 aa19.65■□□□□ 0.74
HIF3A-206ENST00000472815 KCNA6P17658 529 aa19.65■□□□□ 0.74
HIF3A-206ENST00000472815 CD163L1Q9NR16 1453 aa19.65■□□□□ 0.74
HIF3A-206ENST00000472815 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
HIF3A-206ENST00000472815 CDC42BPGQ6DT37 1551 aa19.64■□□□□ 0.74
HIF3A-206ENST00000472815 TOPAZ1Q8N9V7 1692 aa19.64■□□□□ 0.73
HIF3A-206ENST00000472815 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
HIF3A-206ENST00000472815 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
HIF3A-206ENST00000472815 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
HIF3A-206ENST00000472815 INSRP06213 1382 aa19.62■□□□□ 0.73
HIF3A-206ENST00000472815 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
HIF3A-206ENST00000472815 EDC4Q6P2E9 1401 aaKnown RBP19.61■□□□□ 0.73
HIF3A-206ENST00000472815 MON2Q7Z3U7 1717 aa19.61■□□□□ 0.73
HIF3A-206ENST00000472815 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
HIF3A-206ENST00000472815 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
HIF3A-206ENST00000472815 FMN2Q9NZ56 1722 aa19.57■□□□□ 0.72
HIF3A-206ENST00000472815 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
HIF3A-206ENST00000472815 NALCNQ8IZF0 1738 aa19.57■□□□□ 0.72
HIF3A-206ENST00000472815 ZBED9Q6R2W3 1325 aa19.57■□□□□ 0.72
HIF3A-206ENST00000472815 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
HIF3A-206ENST00000472815 PLEKHG3A1L390 1219 aa19.56■□□□□ 0.72
HIF3A-206ENST00000472815 WDR43Q15061 677 aaKnown RBP eCLIP19.56■□□□□ 0.72
HIF3A-206ENST00000472815 ADGRL3Q9HAR2 1447 aa19.55■□□□□ 0.72
HIF3A-206ENST00000472815 POLR3AO14802 1390 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-206ENST00000472815 FYB1O15117 783 aa19.54■□□□□ 0.72
HIF3A-206ENST00000472815 CFAP53Q96M91 514 aa19.54■□□□□ 0.72
HIF3A-206ENST00000472815 XIRP1Q702N8 1843 aaKnown RBP19.54■□□□□ 0.72
HIF3A-206ENST00000472815 LTBP4Q8N2S1 1624 aa19.53■□□□□ 0.72
HIF3A-206ENST00000472815 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
HIF3A-206ENST00000472815 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
HIF3A-206ENST00000472815 PROSER2Q86WR7 435 aaPredicted RBP19.51■□□□□ 0.71
HIF3A-206ENST00000472815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
HIF3A-206ENST00000472815 RGPD8O14715 1765 aaPredicted RBP19.51■□□□□ 0.71
HIF3A-206ENST00000472815 ACEP12821 1306 aa19.51■□□□□ 0.71
HIF3A-206ENST00000472815 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
HIF3A-206ENST00000472815 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
HIF3A-206ENST00000472815 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
HIF3A-206ENST00000472815 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
HIF3A-206ENST00000472815 USP6P35125 1406 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms