RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 FAM117AQ9C073 453 aa8.82□□□□□ -1
COMMD3-211ENST00000472673 PCDHGC3Q9UN70 934 aa8.82□□□□□ -1
COMMD3-211ENST00000472673 C6orf229H3BNL8 230 aa8.81□□□□□ -1
COMMD3-211ENST00000472673 MSS51Q4VC12 460 aa8.81□□□□□ -1
COMMD3-211ENST00000472673 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
COMMD3-211ENST00000472673 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
COMMD3-211ENST00000472673 PRDM9Q9NQV7 894 aa8.81□□□□□ -1
COMMD3-211ENST00000472673 MYSM1Q5VVJ2 828 aa8.8□□□□□ -1
COMMD3-211ENST00000472673 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
COMMD3-211ENST00000472673 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
COMMD3-211ENST00000472673 SPTLC1O15269 473 aa8.79□□□□□ -1
COMMD3-211ENST00000472673 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
COMMD3-211ENST00000472673 ANKLE1Q8NAG6 615 aa8.79□□□□□ -1
COMMD3-211ENST00000472673 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
COMMD3-211ENST00000472673 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
COMMD3-211ENST00000472673 GJA5P36382 358 aa8.78□□□□□ -1
COMMD3-211ENST00000472673 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
COMMD3-211ENST00000472673 RETREG3Q86VR2 466 aa8.78□□□□□ -1
COMMD3-211ENST00000472673 RSPH6AQ9H0K4 717 aa8.78□□□□□ -1
COMMD3-211ENST00000472673 LIMD1Q9UGP4 676 aa8.77□□□□□ -1.01
COMMD3-211ENST00000472673 FCF1Q9Y324 198 aaKnown RBP8.77□□□□□ -1.01
COMMD3-211ENST00000472673 MTMR2Q13614 643 aa8.76□□□□□ -1.01
COMMD3-211ENST00000472673 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
COMMD3-211ENST00000472673 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
COMMD3-211ENST00000472673 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
COMMD3-211ENST00000472673 MMP16P51512 607 aa8.75□□□□□ -1.01
COMMD3-211ENST00000472673 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 DXOO77932 396 aaKnown RBP8.74□□□□□ -1.01
COMMD3-211ENST00000472673 SLC19A1P41440 591 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 PLA2G2CQ5R387 149 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 PRR7Q8TB68 274 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
COMMD3-211ENST00000472673 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-211ENST00000472673 JUNDP17535 347 aa8.73□□□□□ -1.01
COMMD3-211ENST00000472673 HRCP23327 699 aa8.73□□□□□ -1.01
COMMD3-211ENST00000472673 Q6ZNB5 142 aa8.73□□□□□ -1.01
COMMD3-211ENST00000472673 IL27Q8NEV9 243 aa8.73□□□□□ -1.01
COMMD3-211ENST00000472673 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-211ENST00000472673 QPCTQ16769 361 aa8.72□□□□□ -1.01
COMMD3-211ENST00000472673 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
COMMD3-211ENST00000472673 PRPF38BQ5VTL8 546 aaKnown RBP8.72□□□□□ -1.01
COMMD3-211ENST00000472673 EMID1Q96A84 441 aaPredicted RBP8.72□□□□□ -1.01
COMMD3-211ENST00000472673 NUTM2BA6NNL0 878 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-211ENST00000472673 NUTM2EB1AL46 878 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-211ENST00000472673 SKIV2LQ15477 1246 aaKnown RBP8.71□□□□□ -1.02
COMMD3-211ENST00000472673 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.02
COMMD3-211ENST00000472673 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-211ENST00000472673 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
COMMD3-211ENST00000472673 NUTM2AQ8IVF1 878 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-211ENST00000472673 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
COMMD3-211ENST00000472673 CFAP99D6REC4 459 aa8.69□□□□□ -1.02
COMMD3-211ENST00000472673 LILRB3O75022 631 aa8.69□□□□□ -1.02
COMMD3-211ENST00000472673 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-211ENST00000472673 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-211ENST00000472673 SPRYD7Q5W111 196 aa8.68□□□□□ -1.02
COMMD3-211ENST00000472673 RPIAP49247 311 aa8.67□□□□□ -1.02
COMMD3-211ENST00000472673 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-211ENST00000472673 TSC1Q92574 1164 aa8.67□□□□□ -1.02
COMMD3-211ENST00000472673 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
COMMD3-211ENST00000472673 PTPRNQ16849 979 aa8.66□□□□□ -1.02
COMMD3-211ENST00000472673 DESI1Q6ICB0 168 aa8.66□□□□□ -1.02
COMMD3-211ENST00000472673 LCE2BO14633 110 aa8.65□□□□□ -1.02
COMMD3-211ENST00000472673 CCNYL3P0C7X3 344 aa8.65□□□□□ -1.02
COMMD3-211ENST00000472673 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
COMMD3-211ENST00000472673 ZNF697Q5TEC3 545 aa8.65□□□□□ -1.02
COMMD3-211ENST00000472673 ZNF598Q86UK7 904 aaKnown RBP8.65□□□□□ -1.02
COMMD3-211ENST00000472673 CD2BP2O95400 341 aaKnown RBP8.64□□□□□ -1.03
COMMD3-211ENST00000472673 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-211ENST00000472673 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.64□□□□□ -1.03
COMMD3-211ENST00000472673 GFRA3O60609 400 aa8.63□□□□□ -1.03
COMMD3-211ENST00000472673 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
COMMD3-211ENST00000472673 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
COMMD3-211ENST00000472673 TRIM32Q13049 653 aa8.62□□□□□ -1.03
COMMD3-211ENST00000472673 FBXO31Q5XUX0 539 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-211ENST00000472673 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-211ENST00000472673 HELBQ8NG08 1087 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-211ENST00000472673 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-211ENST00000472673 CTHP32929 405 aa8.61□□□□□ -1.03
COMMD3-211ENST00000472673 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
COMMD3-211ENST00000472673 PDZRN3Q9UPQ7 1066 aa8.61□□□□□ -1.03
COMMD3-211ENST00000472673 KCNH2Q12809 1159 aa8.6□□□□□ -1.03
COMMD3-211ENST00000472673 FOXC1Q12948 553 aa8.6□□□□□ -1.03
COMMD3-211ENST00000472673 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
COMMD3-211ENST00000472673 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
COMMD3-211ENST00000472673 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
COMMD3-211ENST00000472673 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
COMMD3-211ENST00000472673 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
COMMD3-211ENST00000472673 MAP10Q9P2G4 905 aa8.58□□□□□ -1.04
COMMD3-211ENST00000472673 GDF9O60383 454 aa8.57□□□□□ -1.04
COMMD3-211ENST00000472673 AP1G2O75843 785 aa8.57□□□□□ -1.04
COMMD3-211ENST00000472673 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-211ENST00000472673 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
COMMD3-211ENST00000472673 RFC5P40937 340 aa8.56□□□□□ -1.04
COMMD3-211ENST00000472673 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
COMMD3-211ENST00000472673 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
COMMD3-211ENST00000472673 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-211ENST00000472673 WNT7BP56706 349 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 SKOR1P84550 965 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 PRR20EP86478 221 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms