RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
LINC02339-201ENST00000472649 KDM4AO75164 1064 aa10.48□□□□□ -0.73
LINC02339-201ENST00000472649 CD46P15529 392 aa10.48□□□□□ -0.73
LINC02339-201ENST00000472649 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
LINC02339-201ENST00000472649 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
LINC02339-201ENST00000472649 CYP4X1Q8N118 509 aa10.47□□□□□ -0.73
LINC02339-201ENST00000472649 RNF19BQ6ZMZ0 732 aa10.45□□□□□ -0.74
LINC02339-201ENST00000472649 PRDM9Q9NQV7 894 aa10.45□□□□□ -0.74
LINC02339-201ENST00000472649 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
LINC02339-201ENST00000472649 CLCN1P35523 988 aa10.44□□□□□ -0.74
LINC02339-201ENST00000472649 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
LINC02339-201ENST00000472649 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
LINC02339-201ENST00000472649 USB1Q9BQ65 265 aaKnown RBP10.43□□□□□ -0.74
LINC02339-201ENST00000472649 GPCPD1Q9NPB8 672 aa10.42□□□□□ -0.74
LINC02339-201ENST00000472649 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
LINC02339-201ENST00000472649 MMP16P51512 607 aa10.4□□□□□ -0.74
LINC02339-201ENST00000472649 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
LINC02339-201ENST00000472649 TRIM32Q13049 653 aa10.38□□□□□ -0.75
LINC02339-201ENST00000472649 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
LINC02339-201ENST00000472649 TOR4AQ9NXH8 423 aa10.38□□□□□ -0.75
LINC02339-201ENST00000472649 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
LINC02339-201ENST00000472649 ST8SIA5O15466 376 aa10.37□□□□□ -0.75
LINC02339-201ENST00000472649 HOXA2O43364 376 aa10.37□□□□□ -0.75
LINC02339-201ENST00000472649 CTC1Q2NKJ3 1217 aa10.37□□□□□ -0.75
LINC02339-201ENST00000472649 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
LINC02339-201ENST00000472649 WNT7AO00755 349 aa10.36□□□□□ -0.75
LINC02339-201ENST00000472649 AXIN1O15169 862 aa10.36□□□□□ -0.75
LINC02339-201ENST00000472649 DXOO77932 396 aaKnown RBP10.36□□□□□ -0.75
LINC02339-201ENST00000472649 CRIPAKQ8N1N5 446 aa10.36□□□□□ -0.75
LINC02339-201ENST00000472649 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
LINC02339-201ENST00000472649 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
LINC02339-201ENST00000472649 AVPP01185 164 aa10.34□□□□□ -0.75
LINC02339-201ENST00000472649 SNIP1Q8TAD8 396 aaKnown RBP10.33□□□□□ -0.76
LINC02339-201ENST00000472649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC02339-201ENST00000472649 JUNDP17535 347 aa10.31□□□□□ -0.76
LINC02339-201ENST00000472649 RETREG3Q86VR2 466 aa10.31□□□□□ -0.76
LINC02339-201ENST00000472649 HLA-CQ95604 372 aa10.31□□□□□ -0.76
LINC02339-201ENST00000472649 WFS1O76024 890 aa10.3□□□□□ -0.76
LINC02339-201ENST00000472649 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
LINC02339-201ENST00000472649 SMCPP49901 116 aaPredicted RBP10.29□□□□□ -0.76
LINC02339-201ENST00000472649 WNT7BP56706 349 aa10.29□□□□□ -0.76
LINC02339-201ENST00000472649 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
LINC02339-201ENST00000472649 LOC100996750A0A140TA64 210 aa10.28□□□□□ -0.76
LINC02339-201ENST00000472649 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
LINC02339-201ENST00000472649 FDX1P10109 184 aa10.28□□□□□ -0.76
LINC02339-201ENST00000472649 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
LINC02339-201ENST00000472649 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
LINC02339-201ENST00000472649 KRTAP4-6Q9BYQ5 205 aa10.28□□□□□ -0.76
LINC02339-201ENST00000472649 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
LINC02339-201ENST00000472649 WIPF1O43516 503 aa10.27□□□□□ -0.77
LINC02339-201ENST00000472649 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
LINC02339-201ENST00000472649 NUDT12Q9BQG2 462 aa10.26□□□□□ -0.77
LINC02339-201ENST00000472649 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
LINC02339-201ENST00000472649 MYO15BQ96JP2 1530 aa10.24□□□□□ -0.77
LINC02339-201ENST00000472649 MS4A1P11836 297 aa10.24□□□□□ -0.77
LINC02339-201ENST00000472649 SMPD1P17405 629 aa10.24□□□□□ -0.77
LINC02339-201ENST00000472649 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
LINC02339-201ENST00000472649 BARGINQ6ZT62 677 aa10.23□□□□□ -0.77
LINC02339-201ENST00000472649 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
LINC02339-201ENST00000472649 GMPR2Q9P2T1 348 aaKnown RBP10.23□□□□□ -0.77
LINC02339-201ENST00000472649 SUPT5HO00267 1087 aaKnown RBP10.22□□□□□ -0.77
LINC02339-201ENST00000472649 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
LINC02339-201ENST00000472649 SPDYE5A6NIY4 337 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 J3QL48 77 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 AMHR2Q16671 573 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 SPIRE2Q8WWL2 714 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 DACH1Q9UI36 760 aa10.21□□□□□ -0.77
LINC02339-201ENST00000472649 ZMYND10O75800 440 aa10.2□□□□□ -0.78
LINC02339-201ENST00000472649 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
LINC02339-201ENST00000472649 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
LINC02339-201ENST00000472649 SKOR1P84550 965 aa10.19□□□□□ -0.78
LINC02339-201ENST00000472649 ATP13A2Q9NQ11 1180 aa10.19□□□□□ -0.78
LINC02339-201ENST00000472649 PTPRNQ16849 979 aa10.18□□□□□ -0.78
LINC02339-201ENST00000472649 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
LINC02339-201ENST00000472649 ZC3H15Q8WU90 426 aaKnown RBP10.18□□□□□ -0.78
LINC02339-201ENST00000472649 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
LINC02339-201ENST00000472649 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
LINC02339-201ENST00000472649 MTMR2Q13614 643 aa10.17□□□□□ -0.78
LINC02339-201ENST00000472649 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
LINC02339-201ENST00000472649 ABCC9O60706 1549 aa10.17□□□□□ -0.78
LINC02339-201ENST00000472649 MOXD2PA6NHM9 499 aa10.16□□□□□ -0.78
LINC02339-201ENST00000472649 HPS1Q92902 700 aa10.16□□□□□ -0.78
LINC02339-201ENST00000472649 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
LINC02339-201ENST00000472649 NDUFV2P19404 249 aa10.15□□□□□ -0.78
LINC02339-201ENST00000472649 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
LINC02339-201ENST00000472649 GJA5P36382 358 aa10.14□□□□□ -0.79
LINC02339-201ENST00000472649 DESI1Q6ICB0 168 aa10.14□□□□□ -0.79
LINC02339-201ENST00000472649 TRIM47Q96LD4 638 aa10.14□□□□□ -0.79
LINC02339-201ENST00000472649 PTCRAQ6ISU1 281 aaPredicted RBP10.13□□□□□ -0.79
LINC02339-201ENST00000472649 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
LINC02339-201ENST00000472649 EVA1BQ9NVM1 165 aa10.13□□□□□ -0.79
LINC02339-201ENST00000472649 NACADO15069 1562 aa10.13□□□□□ -0.79
LINC02339-201ENST00000472649 KCNH2Q12809 1159 aa10.12□□□□□ -0.79
LINC02339-201ENST00000472649 PLEKHG3A1L390 1219 aa10.11□□□□□ -0.79
LINC02339-201ENST00000472649 SH3BP2P78314 561 aa10.11□□□□□ -0.79
LINC02339-201ENST00000472649 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
LINC02339-201ENST00000472649 AK7Q96M32 723 aa10.1□□□□□ -0.79
LINC02339-201ENST00000472649 CTHP32929 405 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms