RNA–Protein interactions for RNA: ENST00000472612.5

PHTF1-208, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-208ENST00000472612 DACH1Q9UI36 760 aa12.39□□□□□ -0.43
PHTF1-208ENST00000472612 AXIN1O15169 862 aa12.38□□□□□ -0.43
PHTF1-208ENST00000472612 CTC1Q2NKJ3 1217 aa12.38□□□□□ -0.43
PHTF1-208ENST00000472612 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
PHTF1-208ENST00000472612 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
PHTF1-208ENST00000472612 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
PHTF1-208ENST00000472612 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
PHTF1-208ENST00000472612 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
PHTF1-208ENST00000472612 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
PHTF1-208ENST00000472612 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
PHTF1-208ENST00000472612 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
PHTF1-208ENST00000472612 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
PHTF1-208ENST00000472612 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
PHTF1-208ENST00000472612 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
PHTF1-208ENST00000472612 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
PHTF1-208ENST00000472612 WNT7AO00755 349 aa12.28□□□□□ -0.44
PHTF1-208ENST00000472612 WFS1O76024 890 aa12.28□□□□□ -0.44
PHTF1-208ENST00000472612 Q3C1V9 767 aa12.28□□□□□ -0.44
PHTF1-208ENST00000472612 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
PHTF1-208ENST00000472612 TRIM32Q13049 653 aa12.26□□□□□ -0.45
PHTF1-208ENST00000472612 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
PHTF1-208ENST00000472612 MMP16P51512 607 aa12.25□□□□□ -0.45
PHTF1-208ENST00000472612 SMPD1P17405 629 aa12.24□□□□□ -0.45
PHTF1-208ENST00000472612 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
PHTF1-208ENST00000472612 CD46P15529 392 aa12.22□□□□□ -0.45
PHTF1-208ENST00000472612 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
PHTF1-208ENST00000472612 MRGPRX2Q96LB1 330 aa12.22□□□□□ -0.45
PHTF1-208ENST00000472612 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
PHTF1-208ENST00000472612 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
PHTF1-208ENST00000472612 USB1Q9BQ65 265 aaKnown RBP12.2□□□□□ -0.46
PHTF1-208ENST00000472612 J3QL48 77 aa12.19□□□□□ -0.46
PHTF1-208ENST00000472612 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
PHTF1-208ENST00000472612 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
PHTF1-208ENST00000472612 KDM4AO75164 1064 aa12.18□□□□□ -0.46
PHTF1-208ENST00000472612 WIPF1O43516 503 aa12.16□□□□□ -0.46
PHTF1-208ENST00000472612 SENP2Q9HC62 589 aa12.16□□□□□ -0.46
PHTF1-208ENST00000472612 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
PHTF1-208ENST00000472612 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
PHTF1-208ENST00000472612 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
PHTF1-208ENST00000472612 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
PHTF1-208ENST00000472612 USP46P62068 366 aa12.14□□□□□ -0.47
PHTF1-208ENST00000472612 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
PHTF1-208ENST00000472612 INSM1Q01101 510 aaPredicted RBP12.14□□□□□ -0.47
PHTF1-208ENST00000472612 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
PHTF1-208ENST00000472612 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
PHTF1-208ENST00000472612 HPS1Q92902 700 aa12.13□□□□□ -0.47
PHTF1-208ENST00000472612 WNT7BP56706 349 aa12.12□□□□□ -0.47
PHTF1-208ENST00000472612 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
PHTF1-208ENST00000472612 ZCCHC6Q5VYS8 1495 aaKnown RBP12.12□□□□□ -0.47
PHTF1-208ENST00000472612 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
PHTF1-208ENST00000472612 SKOR1P84550 965 aa12.11□□□□□ -0.47
PHTF1-208ENST00000472612 HLA-CQ95604 372 aa12.11□□□□□ -0.47
PHTF1-208ENST00000472612 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
PHTF1-208ENST00000472612 HOXA2O43364 376 aa12.09□□□□□ -0.47
PHTF1-208ENST00000472612 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
PHTF1-208ENST00000472612 IRF6O14896 467 aa12.08□□□□□ -0.48
PHTF1-208ENST00000472612 LCE2CQ5TA81 110 aa12.07□□□□□ -0.48
PHTF1-208ENST00000472612 JUNDP17535 347 aa12.06□□□□□ -0.48
PHTF1-208ENST00000472612 ALDH1A1P00352 501 aa12.04□□□□□ -0.48
PHTF1-208ENST00000472612 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
PHTF1-208ENST00000472612 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
PHTF1-208ENST00000472612 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
PHTF1-208ENST00000472612 NUDT12Q9BQG2 462 aa12.01□□□□□ -0.49
PHTF1-208ENST00000472612 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
PHTF1-208ENST00000472612 RETREG3Q86VR2 466 aa12□□□□□ -0.49
PHTF1-208ENST00000472612 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
PHTF1-208ENST00000472612 SIAH2O43255 324 aa11.99□□□□□ -0.49
PHTF1-208ENST00000472612 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
PHTF1-208ENST00000472612 CLCN1P35523 988 aa11.98□□□□□ -0.49
PHTF1-208ENST00000472612 PTCRAQ6ISU1 281 aaPredicted RBP11.98□□□□□ -0.49
PHTF1-208ENST00000472612 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
PHTF1-208ENST00000472612 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
PHTF1-208ENST00000472612 SLC16A10Q8TF71 515 aa11.98□□□□□ -0.49
PHTF1-208ENST00000472612 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
PHTF1-208ENST00000472612 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
PHTF1-208ENST00000472612 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
PHTF1-208ENST00000472612 WASF2Q9Y6W5 498 aa11.96□□□□□ -0.49
PHTF1-208ENST00000472612 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
PHTF1-208ENST00000472612 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
PHTF1-208ENST00000472612 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
PHTF1-208ENST00000472612 BMP1P13497 986 aa11.93□□□□□ -0.5
PHTF1-208ENST00000472612 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
PHTF1-208ENST00000472612 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
PHTF1-208ENST00000472612 FDX1P10109 184 aa11.92□□□□□ -0.5
PHTF1-208ENST00000472612 SH3BP2P78314 561 aa11.92□□□□□ -0.5
PHTF1-208ENST00000472612 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
PHTF1-208ENST00000472612 NESP48681 1621 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 CCNYL3P0C7X3 344 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 MS4A1P11836 297 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
PHTF1-208ENST00000472612 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
PHTF1-208ENST00000472612 IRF7Q92985 503 aa11.88□□□□□ -0.51
PHTF1-208ENST00000472612 GMPRP36959 345 aa11.87□□□□□ -0.51
PHTF1-208ENST00000472612 PTPRNQ16849 979 aa11.87□□□□□ -0.51
PHTF1-208ENST00000472612 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
PHTF1-208ENST00000472612 EVA1BQ9NVM1 165 aa11.86□□□□□ -0.51
PHTF1-208ENST00000472612 BAP1Q92560 729 aa11.84□□□□□ -0.51
PHTF1-208ENST00000472612 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms