RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 SOS2Q07890 1332 aaPredicted RBP15.2■□□□□ 0.02
SCAMP3-205ENST00000472397 RRBP1Q9P2E9 1410 aaKnown RBP15.19■□□□□ 0.02
SCAMP3-205ENST00000472397 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
SCAMP3-205ENST00000472397 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
SCAMP3-205ENST00000472397 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
SCAMP3-205ENST00000472397 TRPC5Q9UL62 973 aaPredicted RBP15.17■□□□□ 0.02
SCAMP3-205ENST00000472397 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
SCAMP3-205ENST00000472397 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAMP3-205ENST00000472397 PPLO60437 1756 aa15.14■□□□□ 0.01
SCAMP3-205ENST00000472397 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
SCAMP3-205ENST00000472397 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
SCAMP3-205ENST00000472397 CABLES1Q8TDN4 633 aa15.13■□□□□ 0.01
SCAMP3-205ENST00000472397 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
SCAMP3-205ENST00000472397 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
SCAMP3-205ENST00000472397 ATRNO75882 1429 aa15.12■□□□□ 0.01
SCAMP3-205ENST00000472397 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
SCAMP3-205ENST00000472397 LMOD2Q6P5Q4 547 aa15.11■□□□□ 0.01
SCAMP3-205ENST00000472397 PXDNQ92626 1479 aa15.11■□□□□ 0.01
SCAMP3-205ENST00000472397 BCL9LQ86UU0 1499 aa15.1■□□□□ 0.01
SCAMP3-205ENST00000472397 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
SCAMP3-205ENST00000472397 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
SCAMP3-205ENST00000472397 MYOM2P54296 1465 aa15.09■□□□□ 0.01
SCAMP3-205ENST00000472397 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
SCAMP3-205ENST00000472397 GJD4Q96KN9 370 aaPredicted RBP15.09■□□□□ 0.01
SCAMP3-205ENST00000472397 LAMC1P11047 1609 aa15.09■□□□□ 0.01
SCAMP3-205ENST00000472397 CFAP70Q5T0N1 1121 aa15.08■□□□□ 0
SCAMP3-205ENST00000472397 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
SCAMP3-205ENST00000472397 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
SCAMP3-205ENST00000472397 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
SCAMP3-205ENST00000472397 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
SCAMP3-205ENST00000472397 DEFB132Q7Z7B7 95 aa15.06■□□□□ 0
SCAMP3-205ENST00000472397 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
SCAMP3-205ENST00000472397 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
SCAMP3-205ENST00000472397 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
SCAMP3-205ENST00000472397 SPATA31A3Q5VYP0 1347 aa15.05■□□□□ -0
SCAMP3-205ENST00000472397 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
SCAMP3-205ENST00000472397 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
SCAMP3-205ENST00000472397 PHF8Q9UPP1 1060 aa15.04■□□□□ -0
SCAMP3-205ENST00000472397 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 ABCC11Q96J66 1382 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 A0A0G2JS52 829 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 MYT1Q01538 1121 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 PRAM1Q96QH2 718 aa15.03■□□□□ -0
SCAMP3-205ENST00000472397 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
SCAMP3-205ENST00000472397 RGPD8O14715 1765 aaPredicted RBP15.02□□□□□ -0.01
SCAMP3-205ENST00000472397 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 MARF1Q9Y4F3 1742 aaKnown RBP15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 PSME1Q06323 249 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 POGKQ9P215 609 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 GLI3P10071 1580 aa15.01□□□□□ -0.01
SCAMP3-205ENST00000472397 TECPR2O15040 1411 aa15□□□□□ -0.01
SCAMP3-205ENST00000472397 PIK3C2GO75747 1445 aa15□□□□□ -0.01
SCAMP3-205ENST00000472397 IFT172Q9UG01 1749 aa15□□□□□ -0.01
SCAMP3-205ENST00000472397 FAM182BQ5T319 152 aa15□□□□□ -0.01
SCAMP3-205ENST00000472397 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
SCAMP3-205ENST00000472397 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
SCAMP3-205ENST00000472397 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
SCAMP3-205ENST00000472397 SLIT2O94813 1529 aa14.98□□□□□ -0.01
SCAMP3-205ENST00000472397 FAM83GA6ND36 823 aa14.98□□□□□ -0.01
SCAMP3-205ENST00000472397 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
SCAMP3-205ENST00000472397 BRWD3Q6RI45 1802 aa14.97□□□□□ -0.01
SCAMP3-205ENST00000472397 PSDA5PKW4 1024 aaPredicted RBP14.97□□□□□ -0.01
SCAMP3-205ENST00000472397 TNS3Q68CZ2 1445 aa14.97□□□□□ -0.01
SCAMP3-205ENST00000472397 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
SCAMP3-205ENST00000472397 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
SCAMP3-205ENST00000472397 SF3B2Q13435 895 aaKnown RBP14.95□□□□□ -0.02
SCAMP3-205ENST00000472397 VPS72Q15906 364 aa14.95□□□□□ -0.02
SCAMP3-205ENST00000472397 FAM98CQ17RN3 349 aaKnown RBP14.95□□□□□ -0.02
SCAMP3-205ENST00000472397 SRCAPQ6ZRS2 3230 aa14.94□□□□□ -0.02
SCAMP3-205ENST00000472397 KIF1AQ12756 1690 aa14.94□□□□□ -0.02
SCAMP3-205ENST00000472397 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
SCAMP3-205ENST00000472397 CCDC125Q86Z20 511 aa14.94□□□□□ -0.02
SCAMP3-205ENST00000472397 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
SCAMP3-205ENST00000472397 EP400Q96L91 3159 aa14.93□□□□□ -0.02
SCAMP3-205ENST00000472397 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
SCAMP3-205ENST00000472397 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
SCAMP3-205ENST00000472397 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
SCAMP3-205ENST00000472397 NUTM2GQ5VZR2 741 aa14.92□□□□□ -0.02
SCAMP3-205ENST00000472397 SIRT1Q96EB6 747 aa14.92□□□□□ -0.02
SCAMP3-205ENST00000472397 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
SCAMP3-205ENST00000472397 PLCH1Q4KWH8 1693 aa14.92□□□□□ -0.02
SCAMP3-205ENST00000472397 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
SCAMP3-205ENST00000472397 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.91□□□□□ -0.02
SCAMP3-205ENST00000472397 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
SCAMP3-205ENST00000472397 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
SCAMP3-205ENST00000472397 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
SCAMP3-205ENST00000472397 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
SCAMP3-205ENST00000472397 NGDNQ8NEJ9 315 aaKnown RBP14.89□□□□□ -0.03
SCAMP3-205ENST00000472397 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
SCAMP3-205ENST00000472397 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
SCAMP3-205ENST00000472397 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
SCAMP3-205ENST00000472397 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
SCAMP3-205ENST00000472397 GPRASP1Q5JY77 1395 aa14.86□□□□□ -0.03
SCAMP3-205ENST00000472397 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
SCAMP3-205ENST00000472397 ONECUT3O60422 494 aaPredicted RBP14.86□□□□□ -0.03
SCAMP3-205ENST00000472397 ZC3H6P61129 1189 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms