RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 NSD3Q9BZ95 1437 aa24.63■■□□□ 1.53
GCFC2-208ENST00000472230 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
GCFC2-208ENST00000472230 NINLQ9Y2I6 1382 aa24.61■■□□□ 1.53
GCFC2-208ENST00000472230 EID1Q9Y6B2 187 aa24.6■■□□□ 1.53
GCFC2-208ENST00000472230 ATAD2Q6PL18 1390 aa24.6■■□□□ 1.53
GCFC2-208ENST00000472230 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
GCFC2-208ENST00000472230 KNDC1Q76NI1 1749 aa24.59■■□□□ 1.53
GCFC2-208ENST00000472230 METP08581 1390 aa24.59■■□□□ 1.53
GCFC2-208ENST00000472230 ANKRD36BQ8N2N9 1353 aa24.59■■□□□ 1.53
GCFC2-208ENST00000472230 NEFLP07196 543 aa24.58■■□□□ 1.53
GCFC2-208ENST00000472230 USP32Q8NFA0 1604 aa24.58■■□□□ 1.53
GCFC2-208ENST00000472230 PLEKHG1Q9ULL1 1385 aa24.57■■□□□ 1.52
GCFC2-208ENST00000472230 TXNDC2Q86VQ3 553 aa24.57■■□□□ 1.52
GCFC2-208ENST00000472230 WAPLQ7Z5K2 1190 aa24.56■■□□□ 1.52
GCFC2-208ENST00000472230 SLIT1O75093 1534 aa24.55■■□□□ 1.52
GCFC2-208ENST00000472230 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
GCFC2-208ENST00000472230 CDK19Q9BWU1 502 aa24.55■■□□□ 1.52
GCFC2-208ENST00000472230 LTKP29376 864 aa24.54■■□□□ 1.52
GCFC2-208ENST00000472230 CGNL1Q0VF96 1302 aa24.54■■□□□ 1.52
GCFC2-208ENST00000472230 INSRP06213 1382 aa24.53■■□□□ 1.52
GCFC2-208ENST00000472230 SUPT16HQ9Y5B9 1047 aaKnown RBP24.52■■□□□ 1.52
GCFC2-208ENST00000472230 PLEKHH1Q9ULM0 1364 aa24.52■■□□□ 1.52
GCFC2-208ENST00000472230 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
GCFC2-208ENST00000472230 MORC1Q86VD1 984 aa24.52■■□□□ 1.52
GCFC2-208ENST00000472230 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
GCFC2-208ENST00000472230 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
GCFC2-208ENST00000472230 SIRT1Q96EB6 747 aa24.51■■□□□ 1.51
GCFC2-208ENST00000472230 CPS1P31327 1500 aa24.51■■□□□ 1.51
GCFC2-208ENST00000472230 TERF2IPQ9NYB0 399 aa24.51■■□□□ 1.51
GCFC2-208ENST00000472230 TECPR2O15040 1411 aa24.51■■□□□ 1.51
GCFC2-208ENST00000472230 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
GCFC2-208ENST00000472230 FKBP8Q14318 412 aa24.49■■□□□ 1.51
GCFC2-208ENST00000472230 NSD2O96028 1365 aa24.48■■□□□ 1.51
GCFC2-208ENST00000472230 ADAMTSL3P82987 1691 aa24.48■■□□□ 1.51
GCFC2-208ENST00000472230 A0A1W2PP64 1363 aa24.48■■□□□ 1.51
GCFC2-208ENST00000472230 BLMP54132 1417 aaPredicted RBP24.48■■□□□ 1.51
GCFC2-208ENST00000472230 SENP3-EIF4A1A0A087X0R7 540 aa24.47■■□□□ 1.51
GCFC2-208ENST00000472230 HDGFL2Q7Z4V5 671 aaPredicted RBP24.47■■□□□ 1.51
GCFC2-208ENST00000472230 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
GCFC2-208ENST00000472230 SMG6Q86US8 1419 aaKnown RBP24.44■■□□□ 1.5
GCFC2-208ENST00000472230 MED14O60244 1454 aa24.44■■□□□ 1.5
GCFC2-208ENST00000472230 WASLO00401 505 aaPredicted RBP24.44■■□□□ 1.5
GCFC2-208ENST00000472230 SLC26A8Q96RN1 970 aa24.44■■□□□ 1.5
GCFC2-208ENST00000472230 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
GCFC2-208ENST00000472230 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
GCFC2-208ENST00000472230 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
GCFC2-208ENST00000472230 DIP2AQ14689 1571 aa24.42■■□□□ 1.5
GCFC2-208ENST00000472230 TNNT2P45379 298 aaPredicted RBP24.41■■□□□ 1.5
GCFC2-208ENST00000472230 CD163L1Q9NR16 1453 aa24.41■■□□□ 1.5
GCFC2-208ENST00000472230 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
GCFC2-208ENST00000472230 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
GCFC2-208ENST00000472230 ROBO2Q9HCK4 1378 aa24.39■■□□□ 1.5
GCFC2-208ENST00000472230 ATP7BP35670 1465 aa24.39■■□□□ 1.49
GCFC2-208ENST00000472230 POLR3AO14802 1390 aaPredicted RBP24.38■■□□□ 1.49
GCFC2-208ENST00000472230 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
GCFC2-208ENST00000472230 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
GCFC2-208ENST00000472230 KIF20BQ96Q89 1820 aa24.36■■□□□ 1.49
GCFC2-208ENST00000472230 PDE3BQ13370 1112 aa24.36■■□□□ 1.49
GCFC2-208ENST00000472230 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
GCFC2-208ENST00000472230 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
GCFC2-208ENST00000472230 CFAP53Q96M91 514 aa24.35■■□□□ 1.49
GCFC2-208ENST00000472230 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
GCFC2-208ENST00000472230 NUDT16Q96DE0 195 aaKnown RBP24.34■■□□□ 1.49
GCFC2-208ENST00000472230 AMOTL2Q9Y2J4 779 aa24.34■■□□□ 1.49
GCFC2-208ENST00000472230 GGNBP2Q9H3C7 697 aa24.33■■□□□ 1.49
GCFC2-208ENST00000472230 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.33■■□□□ 1.49
GCFC2-208ENST00000472230 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.48
GCFC2-208ENST00000472230 MTHFSP49914 203 aa24.31■■□□□ 1.48
GCFC2-208ENST00000472230 FYB1O15117 783 aa24.31■■□□□ 1.48
GCFC2-208ENST00000472230 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
GCFC2-208ENST00000472230 CCDC61Q9Y6R9 512 aa24.31■■□□□ 1.48
GCFC2-208ENST00000472230 PTCH1Q13635 1447 aa24.3■■□□□ 1.48
GCFC2-208ENST00000472230 ITSN1Q15811 1721 aa24.29■■□□□ 1.48
GCFC2-208ENST00000472230 CDC42BPGQ6DT37 1551 aa24.29■■□□□ 1.48
GCFC2-208ENST00000472230 SHPRHQ149N8 1683 aa24.28■■□□□ 1.48
GCFC2-208ENST00000472230 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.47
GCFC2-208ENST00000472230 XRN1Q8IZH2 1706 aaKnown RBP24.26■■□□□ 1.47
GCFC2-208ENST00000472230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■□□□ 13.3
GCFC2-208ENST00000472230 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
GCFC2-208ENST00000472230 EDC4Q6P2E9 1401 aaKnown RBP24.26■■□□□ 1.47
GCFC2-208ENST00000472230 PIK3R4Q99570 1358 aa24.26■■□□□ 1.47
GCFC2-208ENST00000472230 AKAP12Q02952 1782 aa24.25■■□□□ 1.47
GCFC2-208ENST00000472230 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
GCFC2-208ENST00000472230 MON2Q7Z3U7 1717 aa24.25■■□□□ 1.47
GCFC2-208ENST00000472230 PRR36Q9H6K5 1346 aa24.22■■□□□ 1.47
GCFC2-208ENST00000472230 PELP1Q8IZL8 1130 aaKnown RBP24.22■■□□□ 1.47
GCFC2-208ENST00000472230 ZNF692Q9BU19 519 aaPredicted RBP24.22■■□□□ 1.47
GCFC2-208ENST00000472230 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
GCFC2-208ENST00000472230 TOPAZ1Q8N9V7 1692 aa24.21■■□□□ 1.47
GCFC2-208ENST00000472230 ERICH6BQ5W0A0 696 aa24.21■■□□□ 1.47
GCFC2-208ENST00000472230 APAF1O14727 1248 aa24.19■■□□□ 1.46
GCFC2-208ENST00000472230 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
GCFC2-208ENST00000472230 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
GCFC2-208ENST00000472230 NGEFQ8N5V2 710 aa24.18■■□□□ 1.46
GCFC2-208ENST00000472230 KCNA6P17658 529 aa24.17■■□□□ 1.46
GCFC2-208ENST00000472230 CHD2O14647 1828 aaKnown RBP24.17■■□□□ 1.46
GCFC2-208ENST00000472230 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
GCFC2-208ENST00000472230 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
GCFC2-208ENST00000472230 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.46
GCFC2-208ENST00000472230 NME9Q86XW9 330 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms