RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 RALGAPBQ86X10 1494 aa16.08■□□□□ 0.16
CDHR3-209ENST00000472116 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
CDHR3-209ENST00000472116 E9PCH4 1651 aa16.06■□□□□ 0.16
CDHR3-209ENST00000472116 IQGAP3Q86VI3 1631 aa16.06■□□□□ 0.16
CDHR3-209ENST00000472116 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
CDHR3-209ENST00000472116 ORAI2Q96SN7 254 aa16.05■□□□□ 0.16
CDHR3-209ENST00000472116 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
CDHR3-209ENST00000472116 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
CDHR3-209ENST00000472116 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
CDHR3-209ENST00000472116 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
CDHR3-209ENST00000472116 METP08581 1390 aa16.02■□□□□ 0.16
CDHR3-209ENST00000472116 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
CDHR3-209ENST00000472116 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
CDHR3-209ENST00000472116 A0A0G2JS52 829 aa16.01■□□□□ 0.15
CDHR3-209ENST00000472116 MYT1Q01538 1121 aa16.01■□□□□ 0.15
CDHR3-209ENST00000472116 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
CDHR3-209ENST00000472116 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
CDHR3-209ENST00000472116 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
CDHR3-209ENST00000472116 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
CDHR3-209ENST00000472116 SLIT2O94813 1529 aa15.99■□□□□ 0.15
CDHR3-209ENST00000472116 ADGRL2O95490 1459 aa15.99■□□□□ 0.15
CDHR3-209ENST00000472116 LRPPRCP42704 1394 aaKnown RBP15.99■□□□□ 0.15
CDHR3-209ENST00000472116 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
CDHR3-209ENST00000472116 IFFO2Q5TF58 517 aa15.98■□□□□ 0.15
CDHR3-209ENST00000472116 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
CDHR3-209ENST00000472116 ESCO1Q5FWF5 840 aa15.97■□□□□ 0.15
CDHR3-209ENST00000472116 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
CDHR3-209ENST00000472116 EN1Q05925 392 aaPredicted RBP15.96■□□□□ 0.15
CDHR3-209ENST00000472116 PXDNQ92626 1479 aa15.96■□□□□ 0.14
CDHR3-209ENST00000472116 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
CDHR3-209ENST00000472116 XPCQ01831 940 aaPredicted RBP15.94■□□□□ 0.14
CDHR3-209ENST00000472116 VPS72Q15906 364 aa15.94■□□□□ 0.14
CDHR3-209ENST00000472116 FOXO3O43524 673 aa15.93■□□□□ 0.14
CDHR3-209ENST00000472116 APLP2Q06481 763 aa15.93■□□□□ 0.14
CDHR3-209ENST00000472116 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
CDHR3-209ENST00000472116 SENP3-EIF4A1A0A087X0R7 540 aa15.92■□□□□ 0.14
CDHR3-209ENST00000472116 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
CDHR3-209ENST00000472116 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
CDHR3-209ENST00000472116 CDC42BPGQ6DT37 1551 aa15.91■□□□□ 0.14
CDHR3-209ENST00000472116 KIF1BO60333 1816 aa15.9■□□□□ 0.14
CDHR3-209ENST00000472116 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
CDHR3-209ENST00000472116 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
CDHR3-209ENST00000472116 TNS1Q9HBL0 1735 aaKnown RBP15.89■□□□□ 0.13
CDHR3-209ENST00000472116 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
CDHR3-209ENST00000472116 KIF1AQ12756 1690 aa15.87■□□□□ 0.13
CDHR3-209ENST00000472116 NEXMIFQ5QGS0 1516 aa15.87■□□□□ 0.13
CDHR3-209ENST00000472116 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
CDHR3-209ENST00000472116 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
CDHR3-209ENST00000472116 CCDC144AA2RUR9 1427 aa15.85■□□□□ 0.13
CDHR3-209ENST00000472116 EZH2Q15910 746 aaKnown RBP15.85■□□□□ 0.13
CDHR3-209ENST00000472116 FAM98CQ17RN3 349 aaKnown RBP15.85■□□□□ 0.13
CDHR3-209ENST00000472116 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
CDHR3-209ENST00000472116 NUP155O75694 1391 aa15.84■□□□□ 0.13
CDHR3-209ENST00000472116 CHD4Q14839 1912 aa15.84■□□□□ 0.13
CDHR3-209ENST00000472116 ABCA3Q99758 1704 aa15.83■□□□□ 0.13
CDHR3-209ENST00000472116 NBPF8Q3BBV2 869 aa15.83■□□□□ 0.12
CDHR3-209ENST00000472116 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
CDHR3-209ENST00000472116 PARD3Q8TEW0 1356 aa15.83■□□□□ 0.12
CDHR3-209ENST00000472116 PRAG1Q86YV5 1406 aa15.83■□□□□ 0.12
CDHR3-209ENST00000472116 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
CDHR3-209ENST00000472116 SPON1Q9HCB6 807 aa15.82■□□□□ 0.12
CDHR3-209ENST00000472116 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
CDHR3-209ENST00000472116 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
CDHR3-209ENST00000472116 NRAPQ86VF7 1730 aa15.81■□□□□ 0.12
CDHR3-209ENST00000472116 CAMTA1Q9Y6Y1 1673 aa15.81■□□□□ 0.12
CDHR3-209ENST00000472116 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
CDHR3-209ENST00000472116 ZNF784Q8NCA9 323 aaPredicted RBP15.8■□□□□ 0.12
CDHR3-209ENST00000472116 RREB1Q92766 1687 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 PSME1Q06323 249 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 FAM182BQ5T319 152 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
CDHR3-209ENST00000472116 NAIPQ13075 1403 aa15.78■□□□□ 0.12
CDHR3-209ENST00000472116 FMN2Q9NZ56 1722 aa15.78■□□□□ 0.12
CDHR3-209ENST00000472116 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
CDHR3-209ENST00000472116 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
CDHR3-209ENST00000472116 APBA3O96018 575 aa15.77■□□□□ 0.12
CDHR3-209ENST00000472116 C1QTNF8P60827 252 aa15.77■□□□□ 0.12
CDHR3-209ENST00000472116 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
CDHR3-209ENST00000472116 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
CDHR3-209ENST00000472116 KCNQ2O43526 872 aa15.76■□□□□ 0.11
CDHR3-209ENST00000472116 TRIM37O94972 964 aa15.76■□□□□ 0.11
CDHR3-209ENST00000472116 COL14A1Q05707 1796 aaKnown RBP15.76■□□□□ 0.11
CDHR3-209ENST00000472116 ARHGEF10O15013 1369 aa15.75■□□□□ 0.11
CDHR3-209ENST00000472116 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
CDHR3-209ENST00000472116 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
CDHR3-209ENST00000472116 THSD7AQ9UPZ6 1657 aa15.74■□□□□ 0.11
CDHR3-209ENST00000472116 FAM83GA6ND36 823 aa15.73■□□□□ 0.11
CDHR3-209ENST00000472116 IFT172Q9UG01 1749 aa15.72■□□□□ 0.11
CDHR3-209ENST00000472116 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
CDHR3-209ENST00000472116 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
CDHR3-209ENST00000472116 PPLO60437 1756 aa15.72■□□□□ 0.11
CDHR3-209ENST00000472116 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
CDHR3-209ENST00000472116 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
CDHR3-209ENST00000472116 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
CDHR3-209ENST00000472116 KNDC1Q76NI1 1749 aa15.69■□□□□ 0.1
CDHR3-209ENST00000472116 PHF8Q9UPP1 1060 aa15.69■□□□□ 0.1
CDHR3-209ENST00000472116 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
CDHR3-209ENST00000472116 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms