RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 MTMR2Q13614 643 aa9.78□□□□□ -0.84
CDHR3-208ENST00000471910 BLOC1S3Q6QNY0 202 aa9.78□□□□□ -0.84
CDHR3-208ENST00000471910 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
CDHR3-208ENST00000471910 COPS2P61201 443 aa9.77□□□□□ -0.85
CDHR3-208ENST00000471910 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
CDHR3-208ENST00000471910 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-208ENST00000471910 LILRB3O75022 631 aa9.76□□□□□ -0.85
CDHR3-208ENST00000471910 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-208ENST00000471910 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
CDHR3-208ENST00000471910 HRCP23327 699 aa9.75□□□□□ -0.85
CDHR3-208ENST00000471910 PPP2R2DQ66LE6 453 aa9.75□□□□□ -0.85
CDHR3-208ENST00000471910 MTRQ99707 1265 aa9.75□□□□□ -0.85
CDHR3-208ENST00000471910 QPCTQ16769 361 aa9.74□□□□□ -0.85
CDHR3-208ENST00000471910 ZPR1O75312 459 aa9.73□□□□□ -0.85
CDHR3-208ENST00000471910 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
CDHR3-208ENST00000471910 BRICD5Q6PL45 260 aa9.73□□□□□ -0.85
CDHR3-208ENST00000471910 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
CDHR3-208ENST00000471910 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
CDHR3-208ENST00000471910 RFC5P40937 340 aa9.72□□□□□ -0.85
CDHR3-208ENST00000471910 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
CDHR3-208ENST00000471910 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-208ENST00000471910 TJAP1Q5JTD0 557 aa9.71□□□□□ -0.86
CDHR3-208ENST00000471910 SYMPKQ92797 1274 aaKnown RBP9.71□□□□□ -0.86
CDHR3-208ENST00000471910 SPSB2Q99619 263 aa9.71□□□□□ -0.86
CDHR3-208ENST00000471910 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
CDHR3-208ENST00000471910 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-208ENST00000471910 KCNC4Q03721 635 aa9.69□□□□□ -0.86
CDHR3-208ENST00000471910 PRR7Q8TB68 274 aa9.69□□□□□ -0.86
CDHR3-208ENST00000471910 TSC1Q92574 1164 aa9.69□□□□□ -0.86
CDHR3-208ENST00000471910 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
CDHR3-208ENST00000471910 AP1G2O75843 785 aa9.68□□□□□ -0.86
CDHR3-208ENST00000471910 FLIIQ13045 1269 aa9.68□□□□□ -0.86
CDHR3-208ENST00000471910 BANK1Q8NDB2 785 aa9.68□□□□□ -0.86
CDHR3-208ENST00000471910 ADH1BP00325 375 aa9.67□□□□□ -0.86
CDHR3-208ENST00000471910 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
CDHR3-208ENST00000471910 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
CDHR3-208ENST00000471910 MSS51Q4VC12 460 aa9.66□□□□□ -0.86
CDHR3-208ENST00000471910 DESI1Q6ICB0 168 aa9.66□□□□□ -0.86
CDHR3-208ENST00000471910 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
CDHR3-208ENST00000471910 ITGBL1O95965 494 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-208ENST00000471910 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-208ENST00000471910 TLL1O43897 1013 aa9.64□□□□□ -0.87
CDHR3-208ENST00000471910 SLC6A16Q9GZN6 736 aa9.64□□□□□ -0.87
CDHR3-208ENST00000471910 APBB1O00213 710 aa9.63□□□□□ -0.87
CDHR3-208ENST00000471910 JUNDP17535 347 aa9.63□□□□□ -0.87
CDHR3-208ENST00000471910 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-208ENST00000471910 GGCXP38435 758 aa9.61□□□□□ -0.87
CDHR3-208ENST00000471910 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
CDHR3-208ENST00000471910 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
CDHR3-208ENST00000471910 NKX2-3Q8TAU0 364 aa9.6□□□□□ -0.87
CDHR3-208ENST00000471910 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
CDHR3-208ENST00000471910 MMP16P51512 607 aa9.59□□□□□ -0.87
CDHR3-208ENST00000471910 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
CDHR3-208ENST00000471910 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
CDHR3-208ENST00000471910 PTPRNQ16849 979 aa9.58□□□□□ -0.88
CDHR3-208ENST00000471910 S1PR4O95977 384 aa9.57□□□□□ -0.88
CDHR3-208ENST00000471910 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
CDHR3-208ENST00000471910 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
CDHR3-208ENST00000471910 SOCS7O14512 581 aa9.56□□□□□ -0.88
CDHR3-208ENST00000471910 MCM6Q14566 821 aa9.56□□□□□ -0.88
CDHR3-208ENST00000471910 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
CDHR3-208ENST00000471910 PRDM9Q9NQV7 894 aa9.56□□□□□ -0.88
CDHR3-208ENST00000471910 CCNYL3P0C7X3 344 aa9.55□□□□□ -0.88
CDHR3-208ENST00000471910 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
CDHR3-208ENST00000471910 IFFO2Q5TF58 517 aa9.55□□□□□ -0.88
CDHR3-208ENST00000471910 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
CDHR3-208ENST00000471910 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
CDHR3-208ENST00000471910 LRRN4Q8WUT4 740 aa9.55□□□□□ -0.88
CDHR3-208ENST00000471910 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-208ENST00000471910 RAD21O60216 631 aa9.54□□□□□ -0.88
CDHR3-208ENST00000471910 CTHP32929 405 aa9.54□□□□□ -0.88
CDHR3-208ENST00000471910 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
CDHR3-208ENST00000471910 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
CDHR3-208ENST00000471910 EVA1BQ9NVM1 165 aa9.53□□□□□ -0.88
CDHR3-208ENST00000471910 MTMR14Q8NCE2 650 aa9.52□□□□□ -0.89
CDHR3-208ENST00000471910 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
CDHR3-208ENST00000471910 KCNH2Q12809 1159 aa9.51□□□□□ -0.89
CDHR3-208ENST00000471910 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
CDHR3-208ENST00000471910 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
CDHR3-208ENST00000471910 NR6A1Q15406 480 aa9.5□□□□□ -0.89
CDHR3-208ENST00000471910 ANKLE1Q8NAG6 615 aa9.5□□□□□ -0.89
CDHR3-208ENST00000471910 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
CDHR3-208ENST00000471910 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
CDHR3-208ENST00000471910 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
CDHR3-208ENST00000471910 PPEF1O14829 653 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-208ENST00000471910 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-208ENST00000471910 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-208ENST00000471910 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
CDHR3-208ENST00000471910 HMX1Q9NP08 348 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-208ENST00000471910 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-208ENST00000471910 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
CDHR3-208ENST00000471910 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
CDHR3-208ENST00000471910 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.9
CDHR3-208ENST00000471910 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
CDHR3-208ENST00000471910 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
CDHR3-208ENST00000471910 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
CDHR3-208ENST00000471910 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
CDHR3-208ENST00000471910 A6NJR5 290 aa9.44□□□□□ -0.9
CDHR3-208ENST00000471910 ABL2P42684 1182 aa9.44□□□□□ -0.9
CDHR3-208ENST00000471910 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms