RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 MST1RQ04912 1400 aa13.94□□□□□ -0.18
GGPS1-204ENST00000471812 POLA2Q14181 598 aa13.94□□□□□ -0.18
GGPS1-204ENST00000471812 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
GGPS1-204ENST00000471812 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
GGPS1-204ENST00000471812 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
GGPS1-204ENST00000471812 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
GGPS1-204ENST00000471812 KNDC1Q76NI1 1749 aa13.93□□□□□ -0.18
GGPS1-204ENST00000471812 PTCH1Q13635 1447 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 HRCP23327 699 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 STK26Q9P289 416 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 MYOM2P54296 1465 aa13.92□□□□□ -0.18
GGPS1-204ENST00000471812 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
GGPS1-204ENST00000471812 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
GGPS1-204ENST00000471812 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
GGPS1-204ENST00000471812 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.19
GGPS1-204ENST00000471812 ATF3P18847 181 aa13.89□□□□□ -0.19
GGPS1-204ENST00000471812 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-204ENST00000471812 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
GGPS1-204ENST00000471812 KDM2AQ9Y2K7 1162 aa13.89□□□□□ -0.19
GGPS1-204ENST00000471812 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-204ENST00000471812 ADGRB1O14514 1584 aa13.88□□□□□ -0.19
GGPS1-204ENST00000471812 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
GGPS1-204ENST00000471812 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-204ENST00000471812 TECPR2O15040 1411 aa13.88□□□□□ -0.19
GGPS1-204ENST00000471812 DCCP43146 1447 aa13.88□□□□□ -0.19
GGPS1-204ENST00000471812 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
GGPS1-204ENST00000471812 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
GGPS1-204ENST00000471812 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
GGPS1-204ENST00000471812 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
GGPS1-204ENST00000471812 DCAF11Q8TEB1 546 aa13.86□□□□□ -0.19
GGPS1-204ENST00000471812 SIN3AQ96ST3 1273 aa13.86□□□□□ -0.19
GGPS1-204ENST00000471812 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
GGPS1-204ENST00000471812 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-204ENST00000471812 LRP6O75581 1613 aa13.86□□□□□ -0.19
GGPS1-204ENST00000471812 LAMC1P11047 1609 aa13.86□□□□□ -0.19
GGPS1-204ENST00000471812 ORAI2Q96SN7 254 aa13.85□□□□□ -0.19
GGPS1-204ENST00000471812 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
GGPS1-204ENST00000471812 ABCC11Q96J66 1382 aa13.84□□□□□ -0.19
GGPS1-204ENST00000471812 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
GGPS1-204ENST00000471812 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
GGPS1-204ENST00000471812 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
GGPS1-204ENST00000471812 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
GGPS1-204ENST00000471812 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
GGPS1-204ENST00000471812 ARHGEF28Q8N1W1 1705 aaKnown RBP13.82□□□□□ -0.2
GGPS1-204ENST00000471812 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
GGPS1-204ENST00000471812 PRAM1Q96QH2 718 aa13.79□□□□□ -0.2
GGPS1-204ENST00000471812 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
GGPS1-204ENST00000471812 JCADQ9P266 1359 aa13.79□□□□□ -0.2
GGPS1-204ENST00000471812 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
GGPS1-204ENST00000471812 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-204ENST00000471812 NBPF1Q3BBV0 1214 aa13.78□□□□□ -0.2
GGPS1-204ENST00000471812 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-204ENST00000471812 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-204ENST00000471812 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
GGPS1-204ENST00000471812 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
GGPS1-204ENST00000471812 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
GGPS1-204ENST00000471812 PXDNQ92626 1479 aa13.75□□□□□ -0.21
GGPS1-204ENST00000471812 PNPLA6Q8IY17 1366 aa13.75□□□□□ -0.21
GGPS1-204ENST00000471812 KIAA1210Q9ULL0 1709 aa13.75□□□□□ -0.21
GGPS1-204ENST00000471812 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
GGPS1-204ENST00000471812 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-204ENST00000471812 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-204ENST00000471812 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-204ENST00000471812 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-204ENST00000471812 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
GGPS1-204ENST00000471812 NUTM2AQ8IVF1 878 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-204ENST00000471812 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-204ENST00000471812 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
GGPS1-204ENST00000471812 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
GGPS1-204ENST00000471812 FOXO3O43524 673 aa13.72□□□□□ -0.21
GGPS1-204ENST00000471812 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
GGPS1-204ENST00000471812 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
GGPS1-204ENST00000471812 POGKQ9P215 609 aa13.71□□□□□ -0.21
GGPS1-204ENST00000471812 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
GGPS1-204ENST00000471812 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
GGPS1-204ENST00000471812 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-204ENST00000471812 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
GGPS1-204ENST00000471812 TRPM3Q9HCF6 1732 aaPredicted RBP13.68□□□□□ -0.22
GGPS1-204ENST00000471812 SOCS7O14512 581 aa13.68□□□□□ -0.22
GGPS1-204ENST00000471812 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
GGPS1-204ENST00000471812 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
GGPS1-204ENST00000471812 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
GGPS1-204ENST00000471812 ABCA3Q99758 1704 aa13.67□□□□□ -0.22
GGPS1-204ENST00000471812 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
GGPS1-204ENST00000471812 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
GGPS1-204ENST00000471812 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
GGPS1-204ENST00000471812 MARF1Q9Y4F3 1742 aaKnown RBP13.66□□□□□ -0.22
GGPS1-204ENST00000471812 ATP7BP35670 1465 aa13.66□□□□□ -0.22
GGPS1-204ENST00000471812 TOPAZ1Q8N9V7 1692 aa13.66□□□□□ -0.22
GGPS1-204ENST00000471812 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-204ENST00000471812 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
GGPS1-204ENST00000471812 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
GGPS1-204ENST00000471812 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
GGPS1-204ENST00000471812 PROM2Q8N271 834 aa13.64□□□□□ -0.23
GGPS1-204ENST00000471812 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
GGPS1-204ENST00000471812 AFF2P51816 1311 aa13.64□□□□□ -0.23
GGPS1-204ENST00000471812 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
GGPS1-204ENST00000471812 C8orf37Q96NL8 207 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms