RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
GCOM1-206ENST00000471563 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
GCOM1-206ENST00000471563 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
GCOM1-206ENST00000471563 POGKQ9P215 609 aa20.3■□□□□ 0.84
GCOM1-206ENST00000471563 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
GCOM1-206ENST00000471563 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
GCOM1-206ENST00000471563 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
GCOM1-206ENST00000471563 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
GCOM1-206ENST00000471563 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
GCOM1-206ENST00000471563 C3P01024 1663 aa20.29■□□□□ 0.84
GCOM1-206ENST00000471563 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
GCOM1-206ENST00000471563 METP08581 1390 aa20.28■□□□□ 0.84
GCOM1-206ENST00000471563 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
GCOM1-206ENST00000471563 FER1L4A9Z1Z3 1794 aa20.28■□□□□ 0.84
GCOM1-206ENST00000471563 SETD1AO15047 1707 aaKnown RBP20.28■□□□□ 0.84
GCOM1-206ENST00000471563 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
GCOM1-206ENST00000471563 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
GCOM1-206ENST00000471563 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
GCOM1-206ENST00000471563 LTKP29376 864 aa20.25■□□□□ 0.83
GCOM1-206ENST00000471563 NSD3Q9BZ95 1437 aa20.25■□□□□ 0.83
GCOM1-206ENST00000471563 NPC1L1Q9UHC9 1359 aa20.25■□□□□ 0.83
GCOM1-206ENST00000471563 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
GCOM1-206ENST00000471563 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
GCOM1-206ENST00000471563 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
GCOM1-206ENST00000471563 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
GCOM1-206ENST00000471563 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
GCOM1-206ENST00000471563 ABCC11Q96J66 1382 aa20.21■□□□□ 0.83
GCOM1-206ENST00000471563 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
GCOM1-206ENST00000471563 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
GCOM1-206ENST00000471563 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
GCOM1-206ENST00000471563 ADAMTS13Q76LX8 1427 aa20.18■□□□□ 0.82
GCOM1-206ENST00000471563 DLC1Q96QB1 1528 aa20.18■□□□□ 0.82
GCOM1-206ENST00000471563 ANKRD36BQ8N2N9 1353 aa20.17■□□□□ 0.82
GCOM1-206ENST00000471563 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
GCOM1-206ENST00000471563 SLC26A8Q96RN1 970 aa20.16■□□□□ 0.82
GCOM1-206ENST00000471563 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
GCOM1-206ENST00000471563 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
GCOM1-206ENST00000471563 DEKP35659 375 aaKnown RBP20.15■□□□□ 0.82
GCOM1-206ENST00000471563 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.82
GCOM1-206ENST00000471563 PLEKHG1Q9ULL1 1385 aa20.14■□□□□ 0.82
GCOM1-206ENST00000471563 RIMS1Q86UR5 1692 aaKnown RBP20.13■□□□□ 0.81
GCOM1-206ENST00000471563 PAK3O75914 559 aaPredicted RBP20.13■□□□□ 0.81
GCOM1-206ENST00000471563 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
GCOM1-206ENST00000471563 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
GCOM1-206ENST00000471563 CGNL1Q0VF96 1302 aa20.13■□□□□ 0.81
GCOM1-206ENST00000471563 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
GCOM1-206ENST00000471563 CD163L1Q9NR16 1453 aa20.11■□□□□ 0.81
GCOM1-206ENST00000471563 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
GCOM1-206ENST00000471563 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
GCOM1-206ENST00000471563 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
GCOM1-206ENST00000471563 ROBO2Q9HCK4 1378 aa20.11■□□□□ 0.81
GCOM1-206ENST00000471563 SLIT1O75093 1534 aa20.11■□□□□ 0.81
GCOM1-206ENST00000471563 TECPR2O15040 1411 aa20.1■□□□□ 0.81
GCOM1-206ENST00000471563 BLMP54132 1417 aaPredicted RBP20.1■□□□□ 0.81
GCOM1-206ENST00000471563 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
GCOM1-206ENST00000471563 IPO9Q96P70 1041 aaKnown RBP20.1■□□□□ 0.81
GCOM1-206ENST00000471563 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
GCOM1-206ENST00000471563 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.81
GCOM1-206ENST00000471563 USP32Q8NFA0 1604 aa20.08■□□□□ 0.8
GCOM1-206ENST00000471563 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.8
GCOM1-206ENST00000471563 MED14O60244 1454 aa20.08■□□□□ 0.8
GCOM1-206ENST00000471563 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
GCOM1-206ENST00000471563 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
GCOM1-206ENST00000471563 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
GCOM1-206ENST00000471563 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
GCOM1-206ENST00000471563 CPS1P31327 1500 aa20.06■□□□□ 0.8
GCOM1-206ENST00000471563 KNDC1Q76NI1 1749 aa20.06■□□□□ 0.8
GCOM1-206ENST00000471563 SIRT1Q96EB6 747 aa20.05■□□□□ 0.8
GCOM1-206ENST00000471563 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
GCOM1-206ENST00000471563 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
GCOM1-206ENST00000471563 INSRP06213 1382 aa20.04■□□□□ 0.8
GCOM1-206ENST00000471563 FYB1O15117 783 aa20.04■□□□□ 0.8
GCOM1-206ENST00000471563 NBR1Q14596 966 aa20.04■□□□□ 0.8
GCOM1-206ENST00000471563 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
GCOM1-206ENST00000471563 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
GCOM1-206ENST00000471563 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
GCOM1-206ENST00000471563 MTHFSP49914 203 aa20.02■□□□□ 0.8
GCOM1-206ENST00000471563 RRP1P56182 461 aaKnown RBP20.02■□□□□ 0.8
GCOM1-206ENST00000471563 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
GCOM1-206ENST00000471563 CDCA7LQ96GN5 454 aa20.02■□□□□ 0.8
GCOM1-206ENST00000471563 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
GCOM1-206ENST00000471563 NSD2O96028 1365 aa20.01■□□□□ 0.79
GCOM1-206ENST00000471563 POLR3AO14802 1390 aaPredicted RBP20.01■□□□□ 0.79
GCOM1-206ENST00000471563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.01■□□□□ 0.79
GCOM1-206ENST00000471563 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
GCOM1-206ENST00000471563 PPIP5K1Q6PFW1 1433 aa20■□□□□ 0.79
GCOM1-206ENST00000471563 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
GCOM1-206ENST00000471563 NUTM2FA1L443 756 aa20■□□□□ 0.79
GCOM1-206ENST00000471563 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
GCOM1-206ENST00000471563 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
GCOM1-206ENST00000471563 ATP7BP35670 1465 aa19.96■□□□□ 0.79
GCOM1-206ENST00000471563 TCERG1O14776 1098 aaKnown RBP19.96■□□□□ 0.79
GCOM1-206ENST00000471563 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
GCOM1-206ENST00000471563 PDE3BQ13370 1112 aa19.95■□□□□ 0.78
GCOM1-206ENST00000471563 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
GCOM1-206ENST00000471563 FBLN1P23142 703 aa19.95■□□□□ 0.78
GCOM1-206ENST00000471563 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
GCOM1-206ENST00000471563 APAF1O14727 1248 aa19.94■□□□□ 0.78
GCOM1-206ENST00000471563 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
GCOM1-206ENST00000471563 KCNA6P17658 529 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms