RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 PRR14Q9BWN1 585 aa7.57□□□□□ -1.2
CFHR3-205ENST00000471440 LCE2BO14633 110 aa7.57□□□□□ -1.2
CFHR3-205ENST00000471440 GCGRP47871 477 aa7.56□□□□□ -1.2
CFHR3-205ENST00000471440 A6NJR5 290 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 PRKD2Q9BZL6 878 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 CECR2Q9BXF3 1484 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 ACTN4O43707 911 aaKnown RBP7.55□□□□□ -1.2
CFHR3-205ENST00000471440 FUT2Q10981 343 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
CFHR3-205ENST00000471440 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
CFHR3-205ENST00000471440 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
CFHR3-205ENST00000471440 KDM4AO75164 1064 aa7.53□□□□□ -1.2
CFHR3-205ENST00000471440 COPS2P61201 443 aa7.53□□□□□ -1.2
CFHR3-205ENST00000471440 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
CFHR3-205ENST00000471440 KCTD17Q8N5Z5 321 aa7.53□□□□□ -1.2
CFHR3-205ENST00000471440 MTRQ99707 1265 aa7.53□□□□□ -1.2
CFHR3-205ENST00000471440 LOC105371045A0A1W2PR82 267 aa7.52□□□□□ -1.21
CFHR3-205ENST00000471440 MCM6Q14566 821 aa7.52□□□□□ -1.21
CFHR3-205ENST00000471440 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
CFHR3-205ENST00000471440 SMARCA4P51532 1647 aa7.51□□□□□ -1.21
CFHR3-205ENST00000471440 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
CFHR3-205ENST00000471440 CC2D2AQ9P2K1 1620 aa7.51□□□□□ -1.21
CFHR3-205ENST00000471440 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 TJAP1Q5JTD0 557 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 HLA-CQ95604 372 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 POM121Q96HA1 1249 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 IL21Q9HBE4 155 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 GOPCQ9HD26 462 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 ZNF777Q9ULD5 760 aaPredicted RBP7.5□□□□□ -1.21
CFHR3-205ENST00000471440 HOXA2O43364 376 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 FNBP4Q8N3X1 1017 aaPredicted RBP7.5□□□□□ -1.21
CFHR3-205ENST00000471440 SPIRE2Q8WWL2 714 aa7.5□□□□□ -1.21
CFHR3-205ENST00000471440 USP46P62068 366 aa7.49□□□□□ -1.21
CFHR3-205ENST00000471440 ZNF775Q96BV0 537 aaPredicted RBP7.49□□□□□ -1.21
CFHR3-205ENST00000471440 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
CFHR3-205ENST00000471440 MROH2BQ7Z745 1585 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 MORN1Q5T089 497 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 RGS22Q8NE09 1264 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 ZNF516Q92618 1163 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 TBC1D2Q9BYX2 928 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.48□□□□□ -1.21
CFHR3-205ENST00000471440 GUCA2AQ02747 115 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
CFHR3-205ENST00000471440 SMARCA2P51531 1590 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 NCAPD3P42695 1498 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 TLL1O43897 1013 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 GGCXP38435 758 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 SLC27A5Q9Y2P5 690 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 ATAD2BQ9ULI0 1458 aa7.47□□□□□ -1.21
CFHR3-205ENST00000471440 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 RAD21O60216 631 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 ZPR1O75312 459 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 NR1I2O75469 434 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 PPP1R18Q6NYC8 613 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 SCUBE3Q8IX30 993 aa7.46□□□□□ -1.21
CFHR3-205ENST00000471440 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
CFHR3-205ENST00000471440 PEG3Q9GZU2 1588 aa7.46□□□□□ -1.22
CFHR3-205ENST00000471440 NDUFV2P19404 249 aa7.45□□□□□ -1.22
CFHR3-205ENST00000471440 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
CFHR3-205ENST00000471440 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
CFHR3-205ENST00000471440 AEBP1Q8IUX7 1158 aa7.45□□□□□ -1.22
CFHR3-205ENST00000471440 MTMR7Q9Y216 660 aa7.44□□□□□ -1.22
CFHR3-205ENST00000471440 FDX1P10109 184 aa7.44□□□□□ -1.22
CFHR3-205ENST00000471440 IRF5Q13568 498 aa7.44□□□□□ -1.22
CFHR3-205ENST00000471440 PROSER2Q86WR7 435 aaPredicted RBP7.44□□□□□ -1.22
CFHR3-205ENST00000471440 RETREG2Q8NC44 543 aa7.44□□□□□ -1.22
CFHR3-205ENST00000471440 NKX2-3Q8TAU0 364 aa7.44□□□□□ -1.22
CFHR3-205ENST00000471440 IGSF3O75054 1194 aa7.43□□□□□ -1.22
CFHR3-205ENST00000471440 RSBN1LQ6PCB5 846 aaPredicted RBP7.43□□□□□ -1.22
CFHR3-205ENST00000471440 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
CFHR3-205ENST00000471440 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
CFHR3-205ENST00000471440 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
CFHR3-205ENST00000471440 RIC3Q7Z5B4 369 aa7.41□□□□□ -1.22
CFHR3-205ENST00000471440 POLR3EQ9NVU0 708 aa7.41□□□□□ -1.22
CFHR3-205ENST00000471440 LIMD1Q9UGP4 676 aa7.41□□□□□ -1.22
CFHR3-205ENST00000471440 HMGXB3Q12766 1538 aa7.41□□□□□ -1.22
CFHR3-205ENST00000471440 BAZ1BQ9UIG0 1483 aaKnown RBP7.41□□□□□ -1.22
CFHR3-205ENST00000471440 SPTLC1O15269 473 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 FMNL1O95466 1100 aaPredicted RBP7.4□□□□□ -1.22
CFHR3-205ENST00000471440 ADH1BP00325 375 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.22
CFHR3-205ENST00000471440 CSPP1Q1MSJ5 1256 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 Q3C1V9 767 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 SH3D19Q5HYK7 790 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.22
CFHR3-205ENST00000471440 FOXD4L4Q8WXT5 416 aaPredicted RBP7.4□□□□□ -1.22
CFHR3-205ENST00000471440 SYMPKQ92797 1274 aaKnown RBP7.4□□□□□ -1.22
CFHR3-205ENST00000471440 SPSB2Q99619 263 aa7.4□□□□□ -1.22
CFHR3-205ENST00000471440 BRICD5Q6PL45 260 aa7.4□□□□□ -1.23
CFHR3-205ENST00000471440 SALL2Q9Y467 1007 aaPredicted RBP7.4□□□□□ -1.23
CFHR3-205ENST00000471440 WIZO95785 1651 aa7.4□□□□□ -1.23
CFHR3-205ENST00000471440 DGAT1O75907 488 aa7.39□□□□□ -1.23
CFHR3-205ENST00000471440 GJA5P36382 358 aa7.39□□□□□ -1.23
CFHR3-205ENST00000471440 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
CFHR3-205ENST00000471440 C6orf229H3BNL8 230 aa7.39□□□□□ -1.23
CFHR3-205ENST00000471440 PCMTD1Q96MG8 357 aaPredicted RBP7.39□□□□□ -1.23
CFHR3-205ENST00000471440 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms