RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 ERBB4Q15303 1308 aa6.82□□□□□ -1.32
CSMD2-208ENST00000471438 TRIM32Q13049 653 aa6.82□□□□□ -1.32
CSMD2-208ENST00000471438 MORN1Q5T089 497 aa6.82□□□□□ -1.32
CSMD2-208ENST00000471438 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
CSMD2-208ENST00000471438 SPRYD3Q8NCJ5 442 aa6.81□□□□□ -1.32
CSMD2-208ENST00000471438 SLC27A5Q9Y2P5 690 aa6.79□□□□□ -1.32
CSMD2-208ENST00000471438 BMP1P13497 986 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 FECHP22830 423 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 ATP6V1AP38606 617 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 FUT2Q10981 343 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 TMEM151AQ8N4L1 468 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
CSMD2-208ENST00000471438 CECR2Q9BXF3 1484 aa6.78□□□□□ -1.32
CSMD2-208ENST00000471438 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
CSMD2-208ENST00000471438 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
CSMD2-208ENST00000471438 GSK3AP49840 483 aa6.76□□□□□ -1.33
CSMD2-208ENST00000471438 RC3H1Q5TC82 1133 aaKnown RBP6.76□□□□□ -1.33
CSMD2-208ENST00000471438 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
CSMD2-208ENST00000471438 PXYLP1Q8TE99 480 aa6.76□□□□□ -1.33
CSMD2-208ENST00000471438 CUX2O14529 1486 aa6.76□□□□□ -1.33
CSMD2-208ENST00000471438 CAPN5O15484 640 aaPredicted RBP6.75□□□□□ -1.33
CSMD2-208ENST00000471438 GDF11O95390 407 aa6.75□□□□□ -1.33
CSMD2-208ENST00000471438 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
CSMD2-208ENST00000471438 OATP04181 439 aa6.75□□□□□ -1.33
CSMD2-208ENST00000471438 MLLT3P42568 568 aaPredicted RBP6.74□□□□□ -1.33
CSMD2-208ENST00000471438 PAXIP1Q6ZW49 1069 aaPredicted RBP6.74□□□□□ -1.33
CSMD2-208ENST00000471438 CFAP44Q96MT7 982 aa6.74□□□□□ -1.33
CSMD2-208ENST00000471438 NUTM2FA1L443 756 aa6.73□□□□□ -1.33
CSMD2-208ENST00000471438 RASSF7Q02833 373 aa6.73□□□□□ -1.33
CSMD2-208ENST00000471438 RNF19BQ6ZMZ0 732 aa6.73□□□□□ -1.33
CSMD2-208ENST00000471438 WNT7BP56706 349 aa6.72□□□□□ -1.33
CSMD2-208ENST00000471438 MMP16P51512 607 aa6.71□□□□□ -1.34
CSMD2-208ENST00000471438 SKOR1P84550 965 aa6.71□□□□□ -1.34
CSMD2-208ENST00000471438 DDX11L8A8MPP1 907 aa6.7□□□□□ -1.34
CSMD2-208ENST00000471438 RNF225M0QZC1 329 aaPredicted RBP6.7□□□□□ -1.34
CSMD2-208ENST00000471438 FCHSD2O94868 740 aa6.7□□□□□ -1.34
CSMD2-208ENST00000471438 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
CSMD2-208ENST00000471438 ZFP42Q96MM3 310 aa6.7□□□□□ -1.34
CSMD2-208ENST00000471438 DAXXQ9UER7 740 aaPredicted RBP6.7□□□□□ -1.34
CSMD2-208ENST00000471438 WASF2Q9Y6W5 498 aa6.7□□□□□ -1.34
CSMD2-208ENST00000471438 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
CSMD2-208ENST00000471438 CCDC24Q8N4L8 307 aa6.69□□□□□ -1.34
CSMD2-208ENST00000471438 GCGRP47871 477 aa6.68□□□□□ -1.34
CSMD2-208ENST00000471438 GRIPAP1Q4V328 841 aa6.68□□□□□ -1.34
CSMD2-208ENST00000471438 RB1CC1Q8TDY2 1594 aa6.67□□□□□ -1.34
CSMD2-208ENST00000471438 Q3C1V9 767 aa6.67□□□□□ -1.34
CSMD2-208ENST00000471438 XP32Q5T750 250 aa6.67□□□□□ -1.34
CSMD2-208ENST00000471438 CC2D2AQ9P2K1 1620 aa6.66□□□□□ -1.34
CSMD2-208ENST00000471438 DXOO77932 396 aaKnown RBP6.66□□□□□ -1.34
CSMD2-208ENST00000471438 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
CSMD2-208ENST00000471438 SULF1Q8IWU6 871 aa6.65□□□□□ -1.34
CSMD2-208ENST00000471438 EHBP1Q8NDI1 1231 aa6.65□□□□□ -1.34
CSMD2-208ENST00000471438 SIAH2O43255 324 aa6.64□□□□□ -1.35
CSMD2-208ENST00000471438 IGHA1P01876 353 aa6.64□□□□□ -1.35
CSMD2-208ENST00000471438 SCARF1Q14162 830 aa6.64□□□□□ -1.35
CSMD2-208ENST00000471438 USB1Q9BQ65 265 aaKnown RBP6.64□□□□□ -1.35
CSMD2-208ENST00000471438 ADAMTS8Q9UP79 889 aa6.64□□□□□ -1.35
CSMD2-208ENST00000471438 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
CSMD2-208ENST00000471438 MRPL14Q6P1L8 145 aaKnown RBP6.62□□□□□ -1.35
CSMD2-208ENST00000471438 DNMT3AQ9Y6K1 912 aaPredicted RBP6.62□□□□□ -1.35
CSMD2-208ENST00000471438 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
CSMD2-208ENST00000471438 PURBQ96QR8 312 aaKnown RBP6.61□□□□□ -1.35
CSMD2-208ENST00000471438 TSHZ2Q9NRE2 1034 aa6.6□□□□□ -1.35
CSMD2-208ENST00000471438 HIC1Q14526 733 aa6.59□□□□□ -1.35
CSMD2-208ENST00000471438 NLRP7Q8WX94 980 aa6.59□□□□□ -1.35
CSMD2-208ENST00000471438 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
CSMD2-208ENST00000471438 FOXK2Q01167 660 aa6.58□□□□□ -1.36
CSMD2-208ENST00000471438 MAN1A2O60476 641 aa6.57□□□□□ -1.36
CSMD2-208ENST00000471438 IRS1P35568 1242 aa6.57□□□□□ -1.36
CSMD2-208ENST00000471438 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
CSMD2-208ENST00000471438 CNTNAP3BQ96NU0 1288 aa6.56□□□□□ -1.36
CSMD2-208ENST00000471438 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
CSMD2-208ENST00000471438 CCDC180Q9P1Z9 1646 aa6.56□□□□□ -1.36
CSMD2-208ENST00000471438 NNTQ13423 1086 aa6.55□□□□□ -1.36
CSMD2-208ENST00000471438 PLEKHG3A1L390 1219 aa6.54□□□□□ -1.36
CSMD2-208ENST00000471438 JUNDP17535 347 aa6.54□□□□□ -1.36
CSMD2-208ENST00000471438 KRT76Q01546 638 aa6.54□□□□□ -1.36
CSMD2-208ENST00000471438 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
CSMD2-208ENST00000471438 ADH1CP00326 375 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 TIMP2P16035 220 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 WDR4P57081 412 aaKnown RBP6.53□□□□□ -1.36
CSMD2-208ENST00000471438 SH3BP2P78314 561 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 PLCB2Q00722 1185 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 PTCRAQ6ISU1 281 aaPredicted RBP6.53□□□□□ -1.36
CSMD2-208ENST00000471438 KANK3Q6NY19 840 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 SVOPQ8N4V2 548 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 NUDT12Q9BQG2 462 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 UNC13AQ9UPW8 1703 aa6.53□□□□□ -1.36
CSMD2-208ENST00000471438 GNPATO15228 680 aa6.52□□□□□ -1.37
CSMD2-208ENST00000471438 ADAM23O75077 832 aa6.52□□□□□ -1.37
CSMD2-208ENST00000471438 ZNF385CQ66K41 422 aaPredicted RBP6.52□□□□□ -1.37
CSMD2-208ENST00000471438 KDM4AO75164 1064 aa6.51□□□□□ -1.37
CSMD2-208ENST00000471438 MARSP56192 900 aaKnown RBP6.51□□□□□ -1.37
CSMD2-208ENST00000471438 C6orf118Q5T5N4 469 aa6.51□□□□□ -1.37
CSMD2-208ENST00000471438 GPR161Q8N6U8 529 aaKnown RBP6.51□□□□□ -1.37
CSMD2-208ENST00000471438 KCNV2Q8TDN2 545 aa6.51□□□□□ -1.37
CSMD2-208ENST00000471438 ERCC6Q03468 1493 aa6.51□□□□□ -1.37
CSMD2-208ENST00000471438 HLA-CQ95604 372 aa6.49□□□□□ -1.37
CSMD2-208ENST00000471438 SCARF2Q96GP6 870 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms