RNA–Protein interactions for RNA: ENST00000471358.1

PCBP4-209, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-209ENST00000471358 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
PCBP4-209ENST00000471358 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
PCBP4-209ENST00000471358 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
PCBP4-209ENST00000471358 C8orf37Q96NL8 207 aa25.36■■□□□ 1.65
PCBP4-209ENST00000471358 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
PCBP4-209ENST00000471358 ESCO1Q5FWF5 840 aa25.35■■□□□ 1.65
PCBP4-209ENST00000471358 TECPR2O15040 1411 aa25.35■■□□□ 1.65
PCBP4-209ENST00000471358 NUTM2FA1L443 756 aa25.34■■□□□ 1.65
PCBP4-209ENST00000471358 RXRBP28702 533 aa25.34■■□□□ 1.65
PCBP4-209ENST00000471358 ADAMTS2O95450 1211 aa25.33■■□□□ 1.65
PCBP4-209ENST00000471358 C14orf93Q9H972 538 aaKnown RBP25.33■■□□□ 1.65
PCBP4-209ENST00000471358 LAMC1P11047 1609 aa25.33■■□□□ 1.65
PCBP4-209ENST00000471358 CFAP70Q5T0N1 1121 aa25.31■■□□□ 1.64
PCBP4-209ENST00000471358 CDC42BPGQ6DT37 1551 aa25.31■■□□□ 1.64
PCBP4-209ENST00000471358 YTHDC2Q9H6S0 1430 aaKnown RBP25.3■■□□□ 1.64
PCBP4-209ENST00000471358 FOXO3O43524 673 aa25.29■■□□□ 1.64
PCBP4-209ENST00000471358 XPCQ01831 940 aaPredicted RBP25.29■■□□□ 1.64
PCBP4-209ENST00000471358 NGLY1Q96IV0 654 aa25.28■■□□□ 1.64
PCBP4-209ENST00000471358 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
PCBP4-209ENST00000471358 NPHP3Q7Z494 1330 aa25.27■■□□□ 1.64
PCBP4-209ENST00000471358 SIRT1Q96EB6 747 aa25.26■■□□□ 1.63
PCBP4-209ENST00000471358 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
PCBP4-209ENST00000471358 KNDC1Q76NI1 1749 aa25.23■■□□□ 1.63
PCBP4-209ENST00000471358 MYOM2P54296 1465 aa25.23■■□□□ 1.63
PCBP4-209ENST00000471358 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
PCBP4-209ENST00000471358 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.63
PCBP4-209ENST00000471358 PXDNQ92626 1479 aa25.22■■□□□ 1.63
PCBP4-209ENST00000471358 RBM6P78332 1123 aaKnown RBP25.21■■□□□ 1.63
PCBP4-209ENST00000471358 SAFB2Q14151 953 aaKnown RBP eCLIP25.21■■□□□ 1.63
PCBP4-209ENST00000471358 PRAM1Q96QH2 718 aa25.2■■□□□ 1.62
PCBP4-209ENST00000471358 CDK12Q9NYV4 1490 aaPredicted RBP25.2■■□□□ 1.62
PCBP4-209ENST00000471358 KDM2AQ9Y2K7 1162 aa25.19■■□□□ 1.62
PCBP4-209ENST00000471358 USP21Q9UK80 565 aa25.18■■□□□ 1.62
PCBP4-209ENST00000471358 FNBP4Q8N3X1 1017 aaPredicted RBP25.17■■□□□ 1.62
PCBP4-209ENST00000471358 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
PCBP4-209ENST00000471358 HRCP23327 699 aa25.16■■□□□ 1.62
PCBP4-209ENST00000471358 COL22A1Q8NFW1 1626 aaPredicted RBP25.15■■□□□ 1.62
PCBP4-209ENST00000471358 DCAF11Q8TEB1 546 aa25.15■■□□□ 1.62
PCBP4-209ENST00000471358 RGS12O14924 1447 aa25.14■■□□□ 1.62
PCBP4-209ENST00000471358 KRT28Q7Z3Y7 464 aa25.14■■□□□ 1.62
PCBP4-209ENST00000471358 POGKQ9P215 609 aa25.14■■□□□ 1.62
PCBP4-209ENST00000471358 PHF8Q9UPP1 1060 aa25.13■■□□□ 1.61
PCBP4-209ENST00000471358 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
PCBP4-209ENST00000471358 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
PCBP4-209ENST00000471358 TRPC5Q9UL62 973 aaPredicted RBP25.12■■□□□ 1.61
PCBP4-209ENST00000471358 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
PCBP4-209ENST00000471358 RGPD8O14715 1765 aaPredicted RBP25.08■■□□□ 1.61
PCBP4-209ENST00000471358 DLC1Q96QB1 1528 aa25.08■■□□□ 1.61
PCBP4-209ENST00000471358 HIRIP3Q9BW71 556 aaPredicted RBP25.07■■□□□ 1.6
PCBP4-209ENST00000471358 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
PCBP4-209ENST00000471358 ATRNO75882 1429 aa25.06■■□□□ 1.6
PCBP4-209ENST00000471358 KIF1AQ12756 1690 aa25.06■■□□□ 1.6
PCBP4-209ENST00000471358 PMFBP1Q8TBY8 1022 aa25.05■■□□□ 1.6
PCBP4-209ENST00000471358 MINK1Q8N4C8 1332 aaPredicted RBP25.05■■□□□ 1.6
PCBP4-209ENST00000471358 PLEKHG5O94827 1062 aa25.04■■□□□ 1.6
PCBP4-209ENST00000471358 PSME1Q06323 249 aa25.04■■□□□ 1.6
PCBP4-209ENST00000471358 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
PCBP4-209ENST00000471358 STAC3Q96MF2 364 aa25.04■■□□□ 1.6
PCBP4-209ENST00000471358 LMOD2Q6P5Q4 547 aa25.01■■□□□ 1.59
PCBP4-209ENST00000471358 PRR36Q9H6K5 1346 aa25■■□□□ 1.59
PCBP4-209ENST00000471358 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
PCBP4-209ENST00000471358 ANKARQ7Z5J8 1434 aa25■■□□□ 1.59
PCBP4-209ENST00000471358 SBNO1A3KN83 1393 aa24.99■■□□□ 1.59
PCBP4-209ENST00000471358 USP32Q8NFA0 1604 aa24.99■■□□□ 1.59
PCBP4-209ENST00000471358 GJD4Q96KN9 370 aaPredicted RBP24.99■■□□□ 1.59
PCBP4-209ENST00000471358 MARF1Q9Y4F3 1742 aaKnown RBP24.99■■□□□ 1.59
PCBP4-209ENST00000471358 WASLO00401 505 aaPredicted RBP24.97■■□□□ 1.59
PCBP4-209ENST00000471358 HAP1P54257 671 aaPredicted RBP24.97■■□□□ 1.59
PCBP4-209ENST00000471358 UNC5CLQ8IV45 518 aa24.97■■□□□ 1.59
PCBP4-209ENST00000471358 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
PCBP4-209ENST00000471358 SLIT2O94813 1529 aa24.95■■□□□ 1.58
PCBP4-209ENST00000471358 ATAD2Q6PL18 1390 aa24.94■■□□□ 1.58
PCBP4-209ENST00000471358 ARHGEF10O15013 1369 aa24.93■■□□□ 1.58
PCBP4-209ENST00000471358 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
PCBP4-209ENST00000471358 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
PCBP4-209ENST00000471358 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.58
PCBP4-209ENST00000471358 FAM83GA6ND36 823 aa24.89■■□□□ 1.58
PCBP4-209ENST00000471358 GPRASP1Q5JY77 1395 aa24.89■■□□□ 1.57
PCBP4-209ENST00000471358 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
PCBP4-209ENST00000471358 NGDNQ8NEJ9 315 aaKnown RBP24.88■■□□□ 1.57
PCBP4-209ENST00000471358 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
PCBP4-209ENST00000471358 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.86■■□□□ 1.57
PCBP4-209ENST00000471358 GLI3P10071 1580 aa24.86■■□□□ 1.57
PCBP4-209ENST00000471358 EP400Q96L91 3159 aa24.85■■□□□ 1.57
PCBP4-209ENST00000471358 VPS72Q15906 364 aa24.85■■□□□ 1.57
PCBP4-209ENST00000471358 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
PCBP4-209ENST00000471358 ARHGEF28Q8N1W1 1705 aaKnown RBP24.85■■□□□ 1.57
PCBP4-209ENST00000471358 TRPM3Q9HCF6 1732 aaPredicted RBP24.85■■□□□ 1.57
PCBP4-209ENST00000471358 PAK3O75914 559 aaPredicted RBP24.84■■□□□ 1.57
PCBP4-209ENST00000471358 CCDC9Q9Y3X0 531 aaKnown RBP24.83■■□□□ 1.57
PCBP4-209ENST00000471358 ABCA3Q99758 1704 aa24.83■■□□□ 1.57
PCBP4-209ENST00000471358 ATP7BP35670 1465 aa24.81■■□□□ 1.56
PCBP4-209ENST00000471358 SEPT12Q8IYM1 358 aa24.8■■□□□ 1.56
PCBP4-209ENST00000471358 ALS2Q96Q42 1657 aa24.8■■□□□ 1.56
PCBP4-209ENST00000471358 BTG4Q9NY30 223 aa24.79■■□□□ 1.56
PCBP4-209ENST00000471358 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
PCBP4-209ENST00000471358 ONECUT3O60422 494 aaPredicted RBP24.78■■□□□ 1.56
PCBP4-209ENST00000471358 CCDC125Q86Z20 511 aa24.77■■□□□ 1.56
PCBP4-209ENST00000471358 KIAA1210Q9ULL0 1709 aa24.77■■□□□ 1.56
PCBP4-209ENST00000471358 NWD2Q9ULI1 1742 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms