RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
LMCD1-207ENST00000470776 POGKQ9P215 609 aa12.29□□□□□ -0.44
LMCD1-207ENST00000470776 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
LMCD1-207ENST00000470776 QRICH2Q9H0J4 1663 aa12.28□□□□□ -0.44
LMCD1-207ENST00000470776 ROBO2Q9HCK4 1378 aa12.28□□□□□ -0.44
LMCD1-207ENST00000470776 PLEKHH1Q9ULM0 1364 aa12.28□□□□□ -0.44
LMCD1-207ENST00000470776 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
LMCD1-207ENST00000470776 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.44
LMCD1-207ENST00000470776 ILDR2Q71H61 639 aa12.27□□□□□ -0.45
LMCD1-207ENST00000470776 WAPLQ7Z5K2 1190 aa12.27□□□□□ -0.45
LMCD1-207ENST00000470776 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
LMCD1-207ENST00000470776 ANP32CO43423 234 aa12.26□□□□□ -0.45
LMCD1-207ENST00000470776 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
LMCD1-207ENST00000470776 PANK3Q9H999 370 aa12.25□□□□□ -0.45
LMCD1-207ENST00000470776 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
LMCD1-207ENST00000470776 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
LMCD1-207ENST00000470776 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
LMCD1-207ENST00000470776 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
LMCD1-207ENST00000470776 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
LMCD1-207ENST00000470776 CCER2I3L3R5 266 aa12.23□□□□□ -0.45
LMCD1-207ENST00000470776 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-207ENST00000470776 KCNA6P17658 529 aa12.23□□□□□ -0.45
LMCD1-207ENST00000470776 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
LMCD1-207ENST00000470776 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
LMCD1-207ENST00000470776 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-207ENST00000470776 KTN1Q86UP2 1357 aaKnown RBP12.22□□□□□ -0.45
LMCD1-207ENST00000470776 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
LMCD1-207ENST00000470776 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
LMCD1-207ENST00000470776 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
LMCD1-207ENST00000470776 MYOM1P52179 1685 aa12.2□□□□□ -0.46
LMCD1-207ENST00000470776 SRPK2P78362 688 aaKnown RBP12.2□□□□□ -0.46
LMCD1-207ENST00000470776 SLC12A5Q9H2X9 1139 aa12.2□□□□□ -0.46
LMCD1-207ENST00000470776 NWD1Q149M9 1564 aa12.19□□□□□ -0.46
LMCD1-207ENST00000470776 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
LMCD1-207ENST00000470776 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
LMCD1-207ENST00000470776 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
LMCD1-207ENST00000470776 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
LMCD1-207ENST00000470776 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
LMCD1-207ENST00000470776 RALBP1Q15311 655 aa12.18□□□□□ -0.46
LMCD1-207ENST00000470776 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
LMCD1-207ENST00000470776 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
LMCD1-207ENST00000470776 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
LMCD1-207ENST00000470776 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
LMCD1-207ENST00000470776 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
LMCD1-207ENST00000470776 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
LMCD1-207ENST00000470776 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
LMCD1-207ENST00000470776 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
LMCD1-207ENST00000470776 PRR36Q9H6K5 1346 aa12.15□□□□□ -0.46
LMCD1-207ENST00000470776 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
LMCD1-207ENST00000470776 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
LMCD1-207ENST00000470776 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
LMCD1-207ENST00000470776 ATP7BP35670 1465 aa12.14□□□□□ -0.47
LMCD1-207ENST00000470776 CPSF1Q10570 1443 aaKnown RBP12.14□□□□□ -0.47
LMCD1-207ENST00000470776 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
LMCD1-207ENST00000470776 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
LMCD1-207ENST00000470776 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
LMCD1-207ENST00000470776 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
LMCD1-207ENST00000470776 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
LMCD1-207ENST00000470776 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
LMCD1-207ENST00000470776 LTBP4Q8N2S1 1624 aa12.12□□□□□ -0.47
LMCD1-207ENST00000470776 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
LMCD1-207ENST00000470776 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
LMCD1-207ENST00000470776 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
LMCD1-207ENST00000470776 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
LMCD1-207ENST00000470776 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
LMCD1-207ENST00000470776 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
LMCD1-207ENST00000470776 NSD2O96028 1365 aa12.11□□□□□ -0.47
LMCD1-207ENST00000470776 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
LMCD1-207ENST00000470776 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
LMCD1-207ENST00000470776 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
LMCD1-207ENST00000470776 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
LMCD1-207ENST00000470776 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
LMCD1-207ENST00000470776 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
LMCD1-207ENST00000470776 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
LMCD1-207ENST00000470776 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
LMCD1-207ENST00000470776 POLR3AO14802 1390 aaPredicted RBP12.08□□□□□ -0.48
LMCD1-207ENST00000470776 TOPAZ1Q8N9V7 1692 aa12.07□□□□□ -0.48
LMCD1-207ENST00000470776 FYB1O15117 783 aa12.07□□□□□ -0.48
LMCD1-207ENST00000470776 DCCP43146 1447 aa12.07□□□□□ -0.48
LMCD1-207ENST00000470776 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
LMCD1-207ENST00000470776 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
LMCD1-207ENST00000470776 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
LMCD1-207ENST00000470776 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
LMCD1-207ENST00000470776 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
LMCD1-207ENST00000470776 SSH2Q76I76 1423 aa12.06□□□□□ -0.48
LMCD1-207ENST00000470776 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
LMCD1-207ENST00000470776 ACEP12821 1306 aa12.06□□□□□ -0.48
LMCD1-207ENST00000470776 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
LMCD1-207ENST00000470776 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
LMCD1-207ENST00000470776 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
LMCD1-207ENST00000470776 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
LMCD1-207ENST00000470776 USP6P35125 1406 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 LRRC7Q96NW7 1537 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 TTC21BQ7Z4L5 1316 aa12.03□□□□□ -0.48
LMCD1-207ENST00000470776 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
LMCD1-207ENST00000470776 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
LMCD1-207ENST00000470776 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms