RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
HDAC7-219ENST00000470668 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
HDAC7-219ENST00000470668 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-219ENST00000470668 TPM4P67936 248 aa17.29■□□□□ 0.36
HDAC7-219ENST00000470668 TULP1O00294 542 aaPredicted RBP17.28■□□□□ 0.36
HDAC7-219ENST00000470668 BICD2Q8TD16 824 aa17.28■□□□□ 0.36
HDAC7-219ENST00000470668 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
HDAC7-219ENST00000470668 SYCE3A1L190 88 aa17.28■□□□□ 0.36
HDAC7-219ENST00000470668 MTHFSP49914 203 aa17.28■□□□□ 0.36
HDAC7-219ENST00000470668 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
HDAC7-219ENST00000470668 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
HDAC7-219ENST00000470668 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.35
HDAC7-219ENST00000470668 FIBPO43427 364 aa17.27■□□□□ 0.35
HDAC7-219ENST00000470668 IGHDP01880 384 aa17.27■□□□□ 0.35
HDAC7-219ENST00000470668 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
HDAC7-219ENST00000470668 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-219ENST00000470668 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
HDAC7-219ENST00000470668 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 H3BQV1 296 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 SSFA2P28290 1259 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 RABEP1Q15276 862 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
HDAC7-219ENST00000470668 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-219ENST00000470668 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
HDAC7-219ENST00000470668 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
HDAC7-219ENST00000470668 CCDC66A2RUB6 948 aa17.24■□□□□ 0.35
HDAC7-219ENST00000470668 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
HDAC7-219ENST00000470668 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
HDAC7-219ENST00000470668 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
HDAC7-219ENST00000470668 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
HDAC7-219ENST00000470668 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
HDAC7-219ENST00000470668 DAPK1P53355 1430 aa17.23■□□□□ 0.35
HDAC7-219ENST00000470668 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
HDAC7-219ENST00000470668 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
HDAC7-219ENST00000470668 NOB1Q9ULX3 412 aaKnown RBP17.22■□□□□ 0.35
HDAC7-219ENST00000470668 API5Q9BZZ5 524 aaKnown RBP17.22■□□□□ 0.35
HDAC7-219ENST00000470668 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
HDAC7-219ENST00000470668 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
HDAC7-219ENST00000470668 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
HDAC7-219ENST00000470668 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
HDAC7-219ENST00000470668 SASS6Q6UVJ0 657 aa17.21■□□□□ 0.35
HDAC7-219ENST00000470668 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
HDAC7-219ENST00000470668 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-219ENST00000470668 NECTIN2Q92692 538 aa17.21■□□□□ 0.34
HDAC7-219ENST00000470668 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 HMOX1P09601 288 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 GPS2Q13227 327 aa17.2■□□□□ 0.34
HDAC7-219ENST00000470668 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
HDAC7-219ENST00000470668 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
HDAC7-219ENST00000470668 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
HDAC7-219ENST00000470668 SEC24BO95487 1268 aa17.19■□□□□ 0.34
HDAC7-219ENST00000470668 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
HDAC7-219ENST00000470668 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
HDAC7-219ENST00000470668 MNS1Q8NEH6 495 aa17.19■□□□□ 0.34
HDAC7-219ENST00000470668 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
HDAC7-219ENST00000470668 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
HDAC7-219ENST00000470668 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
HDAC7-219ENST00000470668 FOSBP53539 338 aa17.18■□□□□ 0.34
HDAC7-219ENST00000470668 ATF7IPQ6VMQ6 1270 aa17.18■□□□□ 0.34
HDAC7-219ENST00000470668 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
HDAC7-219ENST00000470668 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
HDAC7-219ENST00000470668 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
HDAC7-219ENST00000470668 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
HDAC7-219ENST00000470668 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-219ENST00000470668 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
HDAC7-219ENST00000470668 CCDC112Q8NEF3 446 aa17.16■□□□□ 0.34
HDAC7-219ENST00000470668 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
HDAC7-219ENST00000470668 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
HDAC7-219ENST00000470668 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
HDAC7-219ENST00000470668 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-219ENST00000470668 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
HDAC7-219ENST00000470668 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
HDAC7-219ENST00000470668 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
HDAC7-219ENST00000470668 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
HDAC7-219ENST00000470668 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-219ENST00000470668 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
HDAC7-219ENST00000470668 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
HDAC7-219ENST00000470668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.333e-16■□□□□ 8.2
HDAC7-219ENST00000470668 IGSF3O75054 1194 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
HDAC7-219ENST00000470668 ABCC5O15440 1437 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-219ENST00000470668 USP25Q9UHP3 1055 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-219ENST00000470668 TPM3P06753 285 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 RARSP54136 660 aaKnown RBP17.13■□□□□ 0.33
HDAC7-219ENST00000470668 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
HDAC7-219ENST00000470668 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
HDAC7-219ENST00000470668 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms