RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 EVC2Q86UK5 1308 aa9.59□□□□□ -0.87
KDM3A-210ENST00000470160 NLRP13Q86W25 1043 aa9.59□□□□□ -0.87
KDM3A-210ENST00000470160 PNISRQ8TF01 805 aaKnown RBP9.59□□□□□ -0.87
KDM3A-210ENST00000470160 TOPAZ1Q8N9V7 1692 aa9.58□□□□□ -0.88
KDM3A-210ENST00000470160 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
KDM3A-210ENST00000470160 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
KDM3A-210ENST00000470160 PIK3R4Q99570 1358 aa9.58□□□□□ -0.88
KDM3A-210ENST00000470160 ANKRD36BQ8N2N9 1353 aa9.58□□□□□ -0.88
KDM3A-210ENST00000470160 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
KDM3A-210ENST00000470160 MLECQ14165 292 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 AKAP12Q02952 1782 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 PTCH1Q13635 1447 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 TMEM132EQ6IEE7 984 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 ATP7BP35670 1465 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 CD163L1Q9NR16 1453 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
KDM3A-210ENST00000470160 ZBED9Q6R2W3 1325 aa9.56□□□□□ -0.88
KDM3A-210ENST00000470160 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
KDM3A-210ENST00000470160 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
KDM3A-210ENST00000470160 MRS2Q9HD23 443 aa9.56□□□□□ -0.88
KDM3A-210ENST00000470160 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
KDM3A-210ENST00000470160 KIF20BQ96Q89 1820 aa9.56□□□□□ -0.88
KDM3A-210ENST00000470160 METP08581 1390 aa9.55□□□□□ -0.88
KDM3A-210ENST00000470160 YTHDC1Q96MU7 727 aaKnown RBP9.55□□□□□ -0.88
KDM3A-210ENST00000470160 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
KDM3A-210ENST00000470160 CHD2O14647 1828 aaKnown RBP9.55□□□□□ -0.88
KDM3A-210ENST00000470160 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
KDM3A-210ENST00000470160 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.55□□□□□ -0.88
KDM3A-210ENST00000470160 KNSTRNQ9Y448 316 aa9.54□□□□□ -0.88
KDM3A-210ENST00000470160 CARD14Q9BXL6 1004 aa9.54□□□□□ -0.88
KDM3A-210ENST00000470160 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
KDM3A-210ENST00000470160 SCAF1Q9H7N4 1312 aaKnown RBP9.53□□□□□ -0.88
KDM3A-210ENST00000470160 SHPRHQ149N8 1683 aa9.53□□□□□ -0.88
KDM3A-210ENST00000470160 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
KDM3A-210ENST00000470160 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
KDM3A-210ENST00000470160 CPSF1Q10570 1443 aaKnown RBP9.53□□□□□ -0.88
KDM3A-210ENST00000470160 NRKQ7Z2Y5 1582 aa9.52□□□□□ -0.88
KDM3A-210ENST00000470160 USP54Q70EL1 1684 aa9.52□□□□□ -0.89
KDM3A-210ENST00000470160 PTPRUQ92729 1446 aa9.52□□□□□ -0.89
KDM3A-210ENST00000470160 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
KDM3A-210ENST00000470160 LTKP29376 864 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 PPP2R1AP30153 589 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
KDM3A-210ENST00000470160 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 NSD3Q9BZ95 1437 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
KDM3A-210ENST00000470160 CGNL1Q0VF96 1302 aa9.5□□□□□ -0.89
KDM3A-210ENST00000470160 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
KDM3A-210ENST00000470160 EID1Q9Y6B2 187 aa9.5□□□□□ -0.89
KDM3A-210ENST00000470160 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
KDM3A-210ENST00000470160 SMG6Q86US8 1419 aaKnown RBP9.49□□□□□ -0.89
KDM3A-210ENST00000470160 FMN2Q9NZ56 1722 aa9.49□□□□□ -0.89
KDM3A-210ENST00000470160 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
KDM3A-210ENST00000470160 PLEKHH1Q9ULM0 1364 aa9.49□□□□□ -0.89
KDM3A-210ENST00000470160 CEBPAP49715 358 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-210ENST00000470160 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
KDM3A-210ENST00000470160 NALCNQ8IZF0 1738 aa9.48□□□□□ -0.89
KDM3A-210ENST00000470160 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
KDM3A-210ENST00000470160 WASLO00401 505 aaPredicted RBP9.48□□□□□ -0.89
KDM3A-210ENST00000470160 NGEFQ8N5V2 710 aa9.48□□□□□ -0.89
KDM3A-210ENST00000470160 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
KDM3A-210ENST00000470160 HNRNPUQ00839 825 aaKnown RBP eCLIP9.47□□□□□ -0.89
KDM3A-210ENST00000470160 ANKARQ7Z5J8 1434 aa9.47□□□□□ -0.89
KDM3A-210ENST00000470160 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
KDM3A-210ENST00000470160 POGKQ9P215 609 aa9.47□□□□□ -0.89
KDM3A-210ENST00000470160 EDC4Q6P2E9 1401 aaKnown RBP9.47□□□□□ -0.89
KDM3A-210ENST00000470160 TERF2IPQ9NYB0 399 aa9.47□□□□□ -0.89
KDM3A-210ENST00000470160 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
KDM3A-210ENST00000470160 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
KDM3A-210ENST00000470160 PDE3BQ13370 1112 aa9.46□□□□□ -0.89
KDM3A-210ENST00000470160 CC2D1BQ5T0F9 858 aaKnown RBP9.46□□□□□ -0.9
KDM3A-210ENST00000470160 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 PNPLA6Q8IY17 1366 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 STK26Q9P289 416 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 RNF123Q5XPI4 1314 aa9.45□□□□□ -0.9
KDM3A-210ENST00000470160 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
KDM3A-210ENST00000470160 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
KDM3A-210ENST00000470160 MINK1Q8N4C8 1332 aaPredicted RBP9.44□□□□□ -0.9
KDM3A-210ENST00000470160 AATKQ6ZMQ8 1374 aa9.43□□□□□ -0.9
KDM3A-210ENST00000470160 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
KDM3A-210ENST00000470160 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
KDM3A-210ENST00000470160 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
KDM3A-210ENST00000470160 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-210ENST00000470160 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-210ENST00000470160 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
KDM3A-210ENST00000470160 SRPK2P78362 688 aaKnown RBP9.42□□□□□ -0.9
KDM3A-210ENST00000470160 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
KDM3A-210ENST00000470160 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
KDM3A-210ENST00000470160 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-210ENST00000470160 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
KDM3A-210ENST00000470160 NCOA3Q9Y6Q9 1424 aa9.41□□□□□ -0.9
KDM3A-210ENST00000470160 NKTRP30414 1462 aaKnown RBP9.41□□□□□ -0.9
KDM3A-210ENST00000470160 FYB1O15117 783 aa9.41□□□□□ -0.9
KDM3A-210ENST00000470160 MARF1Q9Y4F3 1742 aaKnown RBP9.41□□□□□ -0.9
KDM3A-210ENST00000470160 RGPD8O14715 1765 aaPredicted RBP9.41□□□□□ -0.9
KDM3A-210ENST00000470160 MAP2P11137 1827 aaKnown RBP9.41□□□□□ -0.9
KDM3A-210ENST00000470160 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms