RNA–Protein interactions for RNA: ENST00000470067.5

CUL4A-206, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-206ENST00000470067 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
CUL4A-206ENST00000470067 KDM5CP41229 1560 aa13.87□□□□□ -0.19
CUL4A-206ENST00000470067 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
CUL4A-206ENST00000470067 C6orf132Q5T0Z8 1188 aa13.86□□□□□ -0.19
CUL4A-206ENST00000470067 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
CUL4A-206ENST00000470067 IRF6O14896 467 aa13.85□□□□□ -0.19
CUL4A-206ENST00000470067 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
CUL4A-206ENST00000470067 CDHR5Q9HBB8 845 aa13.85□□□□□ -0.19
CUL4A-206ENST00000470067 NPDC1Q9NQX5 325 aaPredicted RBP13.84□□□□□ -0.19
CUL4A-206ENST00000470067 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
CUL4A-206ENST00000470067 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
CUL4A-206ENST00000470067 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
CUL4A-206ENST00000470067 CDK11AQ9UQ88 783 aaPredicted RBP13.83□□□□□ -0.2
CUL4A-206ENST00000470067 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
CUL4A-206ENST00000470067 ZNF518AQ6AHZ1 1483 aa13.82□□□□□ -0.2
CUL4A-206ENST00000470067 TRIM66O15016 1216 aa13.82□□□□□ -0.2
CUL4A-206ENST00000470067 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
CUL4A-206ENST00000470067 FECHP22830 423 aa13.81□□□□□ -0.2
CUL4A-206ENST00000470067 ADAM33Q9BZ11 813 aa13.81□□□□□ -0.2
CUL4A-206ENST00000470067 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
CUL4A-206ENST00000470067 CCDC102AQ96A19 550 aa13.8□□□□□ -0.2
CUL4A-206ENST00000470067 ABCC1P33527 1531 aa13.8□□□□□ -0.2
CUL4A-206ENST00000470067 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
CUL4A-206ENST00000470067 CDC42BPAQ5VT25 1732 aa13.79□□□□□ -0.2
CUL4A-206ENST00000470067 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
CUL4A-206ENST00000470067 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
CUL4A-206ENST00000470067 CLIP1P30622 1438 aa13.78□□□□□ -0.2
CUL4A-206ENST00000470067 PDE4DQ08499 809 aa13.77□□□□□ -0.21
CUL4A-206ENST00000470067 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
CUL4A-206ENST00000470067 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
CUL4A-206ENST00000470067 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
CUL4A-206ENST00000470067 GPATCH8Q9UKJ3 1502 aaKnown RBP13.76□□□□□ -0.21
CUL4A-206ENST00000470067 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
CUL4A-206ENST00000470067 C3P01024 1663 aa13.75□□□□□ -0.21
CUL4A-206ENST00000470067 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
CUL4A-206ENST00000470067 AGLP35573 1532 aa13.75□□□□□ -0.21
CUL4A-206ENST00000470067 PTPREP23469 700 aa13.75□□□□□ -0.21
CUL4A-206ENST00000470067 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
CUL4A-206ENST00000470067 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
CUL4A-206ENST00000470067 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
CUL4A-206ENST00000470067 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
CUL4A-206ENST00000470067 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
CUL4A-206ENST00000470067 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
CUL4A-206ENST00000470067 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.21
CUL4A-206ENST00000470067 PRSS12P56730 875 aa13.71□□□□□ -0.21
CUL4A-206ENST00000470067 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
CUL4A-206ENST00000470067 ZNF777Q9ULD5 760 aaPredicted RBP13.71□□□□□ -0.21
CUL4A-206ENST00000470067 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
CUL4A-206ENST00000470067 ERBB3P21860 1342 aa13.7□□□□□ -0.22
CUL4A-206ENST00000470067 OATP04181 439 aa13.7□□□□□ -0.22
CUL4A-206ENST00000470067 AMHR2Q16671 573 aa13.7□□□□□ -0.22
CUL4A-206ENST00000470067 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
CUL4A-206ENST00000470067 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
CUL4A-206ENST00000470067 KDM4CQ9H3R0 1056 aa13.69□□□□□ -0.22
CUL4A-206ENST00000470067 GPBP1L1Q9HC44 474 aaPredicted RBP13.69□□□□□ -0.22
CUL4A-206ENST00000470067 UHRF1BP1Q6BDS2 1440 aa13.68□□□□□ -0.22
CUL4A-206ENST00000470067 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
CUL4A-206ENST00000470067 SPAG9O60271 1321 aaKnown RBP13.66□□□□□ -0.22
CUL4A-206ENST00000470067 ST18O60284 1047 aa13.66□□□□□ -0.22
CUL4A-206ENST00000470067 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
CUL4A-206ENST00000470067 ZMYM3Q14202 1370 aa13.66□□□□□ -0.22
CUL4A-206ENST00000470067 KIAA1107Q9UPP5 1409 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
CUL4A-206ENST00000470067 COL9A1P20849 921 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 TTC13Q8NBP0 860 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
CUL4A-206ENST00000470067 PTPRTO14522 1441 aa13.64□□□□□ -0.23
CUL4A-206ENST00000470067 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
CUL4A-206ENST00000470067 EMP3P54852 163 aa13.64□□□□□ -0.23
CUL4A-206ENST00000470067 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
CUL4A-206ENST00000470067 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
CUL4A-206ENST00000470067 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
CUL4A-206ENST00000470067 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
CUL4A-206ENST00000470067 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
CUL4A-206ENST00000470067 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
CUL4A-206ENST00000470067 ADGRG1Q9Y653 693 aa13.63□□□□□ -0.23
CUL4A-206ENST00000470067 ATP7AQ04656 1500 aa13.63□□□□□ -0.23
CUL4A-206ENST00000470067 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
CUL4A-206ENST00000470067 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 CLCN1P35523 988 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 CNTLNQ9NXG0 1405 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 A2MP01023 1474 aa13.61□□□□□ -0.23
CUL4A-206ENST00000470067 MROH2AA6NES4 1674 aa13.6□□□□□ -0.23
CUL4A-206ENST00000470067 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
CUL4A-206ENST00000470067 NPATQ14207 1427 aa13.6□□□□□ -0.23
CUL4A-206ENST00000470067 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
CUL4A-206ENST00000470067 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
CUL4A-206ENST00000470067 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
CUL4A-206ENST00000470067 PACS2Q86VP3 889 aa13.6□□□□□ -0.23
CUL4A-206ENST00000470067 CAMSAP1Q5T5Y3 1602 aa13.59□□□□□ -0.23
CUL4A-206ENST00000470067 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
CUL4A-206ENST00000470067 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
CUL4A-206ENST00000470067 GGT6Q6P531 493 aa13.58□□□□□ -0.24
CUL4A-206ENST00000470067 IL27Q8NEV9 243 aa13.58□□□□□ -0.24
CUL4A-206ENST00000470067 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
CUL4A-206ENST00000470067 MARVELD3Q96A59 401 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms