RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
TRAPPC3-206ENST00000469757 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
TRAPPC3-206ENST00000469757 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
TRAPPC3-206ENST00000469757 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
TRAPPC3-206ENST00000469757 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
TRAPPC3-206ENST00000469757 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
TRAPPC3-206ENST00000469757 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
TRAPPC3-206ENST00000469757 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
TRAPPC3-206ENST00000469757 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.49
TRAPPC3-206ENST00000469757 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
TRAPPC3-206ENST00000469757 ITSN1Q15811 1721 aa11.95□□□□□ -0.5
TRAPPC3-206ENST00000469757 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
TRAPPC3-206ENST00000469757 ATF3P18847 181 aa11.95□□□□□ -0.5
TRAPPC3-206ENST00000469757 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
TRAPPC3-206ENST00000469757 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
TRAPPC3-206ENST00000469757 STK26Q9P289 416 aa11.94□□□□□ -0.5
TRAPPC3-206ENST00000469757 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
TRAPPC3-206ENST00000469757 ATP7BP35670 1465 aa11.94□□□□□ -0.5
TRAPPC3-206ENST00000469757 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
TRAPPC3-206ENST00000469757 PXDNQ92626 1479 aa11.92□□□□□ -0.5
TRAPPC3-206ENST00000469757 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
TRAPPC3-206ENST00000469757 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
TRAPPC3-206ENST00000469757 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
TRAPPC3-206ENST00000469757 HSPA1LP34931 641 aa11.91□□□□□ -0.5
TRAPPC3-206ENST00000469757 MED1Q15648 1581 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC3-206ENST00000469757 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC3-206ENST00000469757 TRAK1Q9UPV9 953 aa11.9□□□□□ -0.5
TRAPPC3-206ENST00000469757 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC3-206ENST00000469757 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
TRAPPC3-206ENST00000469757 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC3-206ENST00000469757 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC3-206ENST00000469757 POGKQ9P215 609 aa11.87□□□□□ -0.51
TRAPPC3-206ENST00000469757 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC3-206ENST00000469757 ALS2Q96Q42 1657 aa11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 JCADQ9P266 1359 aa11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 PRR36Q9H6K5 1346 aa11.85□□□□□ -0.51
TRAPPC3-206ENST00000469757 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC3-206ENST00000469757 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
TRAPPC3-206ENST00000469757 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
TRAPPC3-206ENST00000469757 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
TRAPPC3-206ENST00000469757 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
TRAPPC3-206ENST00000469757 LRP6O75581 1613 aa11.82□□□□□ -0.52
TRAPPC3-206ENST00000469757 POLR3AO14802 1390 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC3-206ENST00000469757 PNPLA6Q8IY17 1366 aa11.82□□□□□ -0.52
TRAPPC3-206ENST00000469757 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC3-206ENST00000469757 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
TRAPPC3-206ENST00000469757 USP47Q96K76 1375 aa11.81□□□□□ -0.52
TRAPPC3-206ENST00000469757 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
TRAPPC3-206ENST00000469757 AKAP12Q02952 1782 aa11.81□□□□□ -0.52
TRAPPC3-206ENST00000469757 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
TRAPPC3-206ENST00000469757 SBNO1A3KN83 1393 aa11.8□□□□□ -0.52
TRAPPC3-206ENST00000469757 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
TRAPPC3-206ENST00000469757 MON2Q7Z3U7 1717 aa11.8□□□□□ -0.52
TRAPPC3-206ENST00000469757 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
TRAPPC3-206ENST00000469757 MARF1Q9Y4F3 1742 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-206ENST00000469757 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
TRAPPC3-206ENST00000469757 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
TRAPPC3-206ENST00000469757 PPIP5K1Q6PFW1 1433 aa11.78□□□□□ -0.52
TRAPPC3-206ENST00000469757 USP54Q70EL1 1684 aa11.78□□□□□ -0.52
TRAPPC3-206ENST00000469757 MYOM1P52179 1685 aa11.78□□□□□ -0.52
TRAPPC3-206ENST00000469757 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 NUDT16Q96DE0 195 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 TESK2Q96S53 571 aa11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-206ENST00000469757 PHRF1Q9P1Y6 1649 aaKnown RBP11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 FOXO3O43524 673 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
TRAPPC3-206ENST00000469757 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
TRAPPC3-206ENST00000469757 USP6P35125 1406 aa11.75□□□□□ -0.53
TRAPPC3-206ENST00000469757 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
TRAPPC3-206ENST00000469757 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
TRAPPC3-206ENST00000469757 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.74□□□□□ -0.53
TRAPPC3-206ENST00000469757 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
TRAPPC3-206ENST00000469757 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
TRAPPC3-206ENST00000469757 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
TRAPPC3-206ENST00000469757 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
TRAPPC3-206ENST00000469757 PLCH1Q4KWH8 1693 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 SLIT3O75094 1523 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 ACEP12821 1306 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 PSME1Q06323 249 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms