RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-203ENST00000469739 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
TOP3A-203ENST00000469739 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
TOP3A-203ENST00000469739 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-203ENST00000469739 PIK3C2BO00750 1634 aa12.42□□□□□ -0.42
TOP3A-203ENST00000469739 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
TOP3A-203ENST00000469739 SYNMO15061 1565 aa12.42□□□□□ -0.42
TOP3A-203ENST00000469739 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
TOP3A-203ENST00000469739 PLEKHH1Q9ULM0 1364 aa12.41□□□□□ -0.42
TOP3A-203ENST00000469739 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
TOP3A-203ENST00000469739 MYOM1P52179 1685 aa12.4□□□□□ -0.42
TOP3A-203ENST00000469739 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
TOP3A-203ENST00000469739 FBLN1P23142 703 aa12.39□□□□□ -0.43
TOP3A-203ENST00000469739 POGKQ9P215 609 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 MYO3AQ8NEV4 1616 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 KIF13AQ9H1H9 1805 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 KDM5AP29375 1690 aaKnown RBP12.38□□□□□ -0.43
TOP3A-203ENST00000469739 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 GGNBP2Q9H3C7 697 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
TOP3A-203ENST00000469739 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
TOP3A-203ENST00000469739 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-203ENST00000469739 PREX1Q8TCU6 1659 aa12.37□□□□□ -0.43
TOP3A-203ENST00000469739 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
TOP3A-203ENST00000469739 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-203ENST00000469739 BCAR3O75815 825 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 MTHFSP49914 203 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
TOP3A-203ENST00000469739 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
TOP3A-203ENST00000469739 DUSP27Q5VZP5 1158 aa12.35□□□□□ -0.43
TOP3A-203ENST00000469739 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
TOP3A-203ENST00000469739 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
TOP3A-203ENST00000469739 ASXL1Q8IXJ9 1541 aa12.35□□□□□ -0.43
TOP3A-203ENST00000469739 NBR1Q14596 966 aa12.34□□□□□ -0.43
TOP3A-203ENST00000469739 WAPLQ7Z5K2 1190 aa12.34□□□□□ -0.43
TOP3A-203ENST00000469739 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
TOP3A-203ENST00000469739 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-203ENST00000469739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.34□□□□□ -0.43
TOP3A-203ENST00000469739 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-203ENST00000469739 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
TOP3A-203ENST00000469739 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
TOP3A-203ENST00000469739 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.44
TOP3A-203ENST00000469739 UBE2Q2Q8WVN8 375 aa12.32□□□□□ -0.44
TOP3A-203ENST00000469739 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
TOP3A-203ENST00000469739 BLMP54132 1417 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-203ENST00000469739 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-203ENST00000469739 RGS3P49796 1198 aa12.31□□□□□ -0.44
TOP3A-203ENST00000469739 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
TOP3A-203ENST00000469739 ESF1Q9H501 851 aaKnown RBP12.3□□□□□ -0.44
TOP3A-203ENST00000469739 TMEM131LA2VDJ0 1609 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
TOP3A-203ENST00000469739 AGLP35573 1532 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
TOP3A-203ENST00000469739 RPGRIP1LQ68CZ1 1315 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 CLUAP1Q96AJ1 413 aa12.3□□□□□ -0.44
TOP3A-203ENST00000469739 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
TOP3A-203ENST00000469739 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
TOP3A-203ENST00000469739 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
TOP3A-203ENST00000469739 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
TOP3A-203ENST00000469739 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
TOP3A-203ENST00000469739 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
TOP3A-203ENST00000469739 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
TOP3A-203ENST00000469739 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
TOP3A-203ENST00000469739 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
TOP3A-203ENST00000469739 WWC1Q8IX03 1113 aa12.27□□□□□ -0.44
TOP3A-203ENST00000469739 SOX12O15370 315 aa12.27□□□□□ -0.45
TOP3A-203ENST00000469739 SLC52A1Q9NWF4 448 aa12.27□□□□□ -0.45
TOP3A-203ENST00000469739 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
TOP3A-203ENST00000469739 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
TOP3A-203ENST00000469739 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
TOP3A-203ENST00000469739 CDK19Q9BWU1 502 aa12.26□□□□□ -0.45
TOP3A-203ENST00000469739 ANP32AP39687 249 aaKnown RBP12.25□□□□□ -0.45
TOP3A-203ENST00000469739 CEBPAP49715 358 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-203ENST00000469739 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
TOP3A-203ENST00000469739 PDE4AP27815 886 aa12.25□□□□□ -0.45
TOP3A-203ENST00000469739 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
TOP3A-203ENST00000469739 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
TOP3A-203ENST00000469739 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-203ENST00000469739 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-203ENST00000469739 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
TOP3A-203ENST00000469739 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
TOP3A-203ENST00000469739 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
TOP3A-203ENST00000469739 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
TOP3A-203ENST00000469739 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
TOP3A-203ENST00000469739 A0A1W2PP64 1363 aa12.23□□□□□ -0.45
TOP3A-203ENST00000469739 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
TOP3A-203ENST00000469739 E9PSI1 815 aa12.22□□□□□ -0.45
TOP3A-203ENST00000469739 FYB1O15117 783 aa12.22□□□□□ -0.45
TOP3A-203ENST00000469739 RUNDC1Q96C34 613 aa12.22□□□□□ -0.45
TOP3A-203ENST00000469739 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
TOP3A-203ENST00000469739 HMOX1P09601 288 aa12.22□□□□□ -0.45
TOP3A-203ENST00000469739 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms