RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 C14orf93Q9H972 538 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-215ENST00000469653 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-215ENST00000469653 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-215ENST00000469653 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
SEMA4D-215ENST00000469653 LAMC1P11047 1609 aa13.57□□□□□ -0.24
SEMA4D-215ENST00000469653 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
SEMA4D-215ENST00000469653 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
SEMA4D-215ENST00000469653 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
SEMA4D-215ENST00000469653 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
SEMA4D-215ENST00000469653 TMEM132EQ6IEE7 984 aa13.55□□□□□ -0.24
SEMA4D-215ENST00000469653 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
SEMA4D-215ENST00000469653 METP08581 1390 aa13.55□□□□□ -0.24
SEMA4D-215ENST00000469653 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
SEMA4D-215ENST00000469653 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-215ENST00000469653 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
SEMA4D-215ENST00000469653 ASXL1Q8IXJ9 1541 aa13.53□□□□□ -0.24
SEMA4D-215ENST00000469653 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-215ENST00000469653 ADGRB1O14514 1584 aa13.52□□□□□ -0.24
SEMA4D-215ENST00000469653 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-215ENST00000469653 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
SEMA4D-215ENST00000469653 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-215ENST00000469653 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-215ENST00000469653 STK26Q9P289 416 aa13.51□□□□□ -0.25
SEMA4D-215ENST00000469653 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
SEMA4D-215ENST00000469653 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
SEMA4D-215ENST00000469653 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
SEMA4D-215ENST00000469653 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
SEMA4D-215ENST00000469653 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-215ENST00000469653 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
SEMA4D-215ENST00000469653 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
SEMA4D-215ENST00000469653 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
SEMA4D-215ENST00000469653 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
SEMA4D-215ENST00000469653 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
SEMA4D-215ENST00000469653 KCNA6P17658 529 aa13.47□□□□□ -0.25
SEMA4D-215ENST00000469653 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-215ENST00000469653 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
SEMA4D-215ENST00000469653 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
SEMA4D-215ENST00000469653 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-215ENST00000469653 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
SEMA4D-215ENST00000469653 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
SEMA4D-215ENST00000469653 NWD1Q149M9 1564 aa13.46□□□□□ -0.26
SEMA4D-215ENST00000469653 ABCC11Q96J66 1382 aa13.46□□□□□ -0.26
SEMA4D-215ENST00000469653 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.26
SEMA4D-215ENST00000469653 ARHGEF28Q8N1W1 1705 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-215ENST00000469653 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-215ENST00000469653 FGD1P98174 961 aa13.44□□□□□ -0.26
SEMA4D-215ENST00000469653 TECPR2O15040 1411 aa13.44□□□□□ -0.26
SEMA4D-215ENST00000469653 ROBO2Q9HCK4 1378 aa13.44□□□□□ -0.26
SEMA4D-215ENST00000469653 CPS1P31327 1500 aa13.44□□□□□ -0.26
SEMA4D-215ENST00000469653 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
SEMA4D-215ENST00000469653 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
SEMA4D-215ENST00000469653 USP47Q96K76 1375 aa13.43□□□□□ -0.26
SEMA4D-215ENST00000469653 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
SEMA4D-215ENST00000469653 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-215ENST00000469653 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 EIF3AQ14152 1382 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 POGKQ9P215 609 aa13.42□□□□□ -0.26
SEMA4D-215ENST00000469653 ERICH6BQ5W0A0 696 aa13.41□□□□□ -0.26
SEMA4D-215ENST00000469653 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-215ENST00000469653 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
SEMA4D-215ENST00000469653 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEMA4D-215ENST00000469653 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
SEMA4D-215ENST00000469653 SIRT1Q96EB6 747 aa13.4□□□□□ -0.26
SEMA4D-215ENST00000469653 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
SEMA4D-215ENST00000469653 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
SEMA4D-215ENST00000469653 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-215ENST00000469653 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
SEMA4D-215ENST00000469653 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-215ENST00000469653 LRRC7Q96NW7 1537 aa13.38□□□□□ -0.27
SEMA4D-215ENST00000469653 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-215ENST00000469653 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-215ENST00000469653 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
SEMA4D-215ENST00000469653 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
SEMA4D-215ENST00000469653 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
SEMA4D-215ENST00000469653 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-215ENST00000469653 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-215ENST00000469653 TESK2Q96S53 571 aa13.34□□□□□ -0.27
SEMA4D-215ENST00000469653 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
SEMA4D-215ENST00000469653 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
SEMA4D-215ENST00000469653 IGSF3O75054 1194 aa13.33□□□□□ -0.28
SEMA4D-215ENST00000469653 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
SEMA4D-215ENST00000469653 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
SEMA4D-215ENST00000469653 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-215ENST00000469653 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
SEMA4D-215ENST00000469653 ADGRB2O60241 1585 aa13.31□□□□□ -0.28
SEMA4D-215ENST00000469653 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
SEMA4D-215ENST00000469653 MSH6P52701 1360 aa13.31□□□□□ -0.28
SEMA4D-215ENST00000469653 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
SEMA4D-215ENST00000469653 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 WASLO00401 505 aaPredicted RBP13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
SEMA4D-215ENST00000469653 TMF1P82094 1093 aa13.29□□□□□ -0.28
SEMA4D-215ENST00000469653 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms