RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
FAM49A-205ENST00000469507 IL21Q9HBE4 155 aa8.33□□□□□ -1.08
FAM49A-205ENST00000469507 MTMR7Q9Y216 660 aa8.33□□□□□ -1.08
FAM49A-205ENST00000469507 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
FAM49A-205ENST00000469507 METTL3Q86U44 580 aaKnown RBP8.31□□□□□ -1.08
FAM49A-205ENST00000469507 TATDN2Q93075 761 aa8.31□□□□□ -1.08
FAM49A-205ENST00000469507 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
FAM49A-205ENST00000469507 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
FAM49A-205ENST00000469507 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
FAM49A-205ENST00000469507 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
FAM49A-205ENST00000469507 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
FAM49A-205ENST00000469507 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
FAM49A-205ENST00000469507 APLP1P51693 650 aa8.29□□□□□ -1.08
FAM49A-205ENST00000469507 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
FAM49A-205ENST00000469507 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
FAM49A-205ENST00000469507 SOCS7O14512 581 aa8.28□□□□□ -1.08
FAM49A-205ENST00000469507 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
FAM49A-205ENST00000469507 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
FAM49A-205ENST00000469507 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
FAM49A-205ENST00000469507 RNF40O75150 1001 aa8.27□□□□□ -1.09
FAM49A-205ENST00000469507 FBXO31Q5XUX0 539 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-205ENST00000469507 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
FAM49A-205ENST00000469507 NUDT18Q6ZVK8 323 aa8.26□□□□□ -1.09
FAM49A-205ENST00000469507 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
FAM49A-205ENST00000469507 MTMR14Q8NCE2 650 aa8.26□□□□□ -1.09
FAM49A-205ENST00000469507 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
FAM49A-205ENST00000469507 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
FAM49A-205ENST00000469507 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
FAM49A-205ENST00000469507 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
FAM49A-205ENST00000469507 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
FAM49A-205ENST00000469507 KCNA1Q09470 495 aa8.24□□□□□ -1.09
FAM49A-205ENST00000469507 NLRP7Q8WX94 980 aa8.24□□□□□ -1.09
FAM49A-205ENST00000469507 GLMNQ92990 594 aa8.24□□□□□ -1.09
FAM49A-205ENST00000469507 BRD1O95696 1058 aa8.23□□□□□ -1.09
FAM49A-205ENST00000469507 ABL2P42684 1182 aa8.23□□□□□ -1.09
FAM49A-205ENST00000469507 FOXD4L5Q5VV16 416 aaPredicted RBP8.23□□□□□ -1.09
FAM49A-205ENST00000469507 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
FAM49A-205ENST00000469507 SPTLC1O15269 473 aa8.22□□□□□ -1.09
FAM49A-205ENST00000469507 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
FAM49A-205ENST00000469507 COPS2P61201 443 aa8.22□□□□□ -1.09
FAM49A-205ENST00000469507 PADI6Q6TGC4 694 aa8.22□□□□□ -1.09
FAM49A-205ENST00000469507 SPIRE2Q8WWL2 714 aa8.22□□□□□ -1.09
FAM49A-205ENST00000469507 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
FAM49A-205ENST00000469507 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
FAM49A-205ENST00000469507 HDGFP51858 240 aaKnown RBP8.21□□□□□ -1.1
FAM49A-205ENST00000469507 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
FAM49A-205ENST00000469507 USTQ9Y2C2 406 aa8.21□□□□□ -1.1
FAM49A-205ENST00000469507 SWT1Q5T5J6 900 aaKnown RBP8.2□□□□□ -1.1
FAM49A-205ENST00000469507 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
FAM49A-205ENST00000469507 E9PSI1 815 aa8.19□□□□□ -1.1
FAM49A-205ENST00000469507 ZNF775Q96BV0 537 aaPredicted RBP8.19□□□□□ -1.1
FAM49A-205ENST00000469507 TBC1D2BQ9UPU7 963 aa8.19□□□□□ -1.1
FAM49A-205ENST00000469507 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 GJA5P36382 358 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 GGCXP38435 758 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 RSBN1LQ6PCB5 846 aaPredicted RBP8.18□□□□□ -1.1
FAM49A-205ENST00000469507 RBM46Q8TBY0 533 aaKnown RBP8.18□□□□□ -1.1
FAM49A-205ENST00000469507 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 SHROOM4Q9ULL8 1493 aa8.18□□□□□ -1.1
FAM49A-205ENST00000469507 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
FAM49A-205ENST00000469507 LILRB3O75022 631 aa8.17□□□□□ -1.1
FAM49A-205ENST00000469507 ZPR1O75312 459 aa8.17□□□□□ -1.1
FAM49A-205ENST00000469507 TRIM67Q6ZTA4 783 aa8.17□□□□□ -1.1
FAM49A-205ENST00000469507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.16□□□□□ -1.1
FAM49A-205ENST00000469507 AP1G2O75843 785 aa8.16□□□□□ -1.1
FAM49A-205ENST00000469507 CD46P15529 392 aa8.16□□□□□ -1.1
FAM49A-205ENST00000469507 SRPK2P78362 688 aaKnown RBP8.16□□□□□ -1.1
FAM49A-205ENST00000469507 NUTM1Q86Y26 1132 aa8.16□□□□□ -1.1
FAM49A-205ENST00000469507 SLF2Q8IX21 1173 aa8.16□□□□□ -1.1
FAM49A-205ENST00000469507 EMID1Q96A84 441 aaPredicted RBP8.16□□□□□ -1.1
FAM49A-205ENST00000469507 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
FAM49A-205ENST00000469507 AMOTL2Q9Y2J4 779 aa8.15□□□□□ -1.1
FAM49A-205ENST00000469507 RFX1P22670 979 aa8.14□□□□□ -1.11
FAM49A-205ENST00000469507 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
FAM49A-205ENST00000469507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
FAM49A-205ENST00000469507 MOXD2PA6NHM9 499 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 SLC19A1P41440 591 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 QPCTQ16769 361 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
FAM49A-205ENST00000469507 SULF1Q8IWU6 871 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 NDUFB9Q9Y6M9 179 aa8.13□□□□□ -1.11
FAM49A-205ENST00000469507 USP17L8P0C7I0 530 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
FAM49A-205ENST00000469507 BLOC1S3Q6QNY0 202 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 ADAMTS19Q8TE59 1207 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 EYA1Q99502 592 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 PPP1R12CQ9BZL4 782 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
FAM49A-205ENST00000469507 RCCD1A6NED2 376 aa8.11□□□□□ -1.11
FAM49A-205ENST00000469507 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
FAM49A-205ENST00000469507 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
FAM49A-205ENST00000469507 IGSF3O75054 1194 aa8.11□□□□□ -1.11
FAM49A-205ENST00000469507 NUTM2DQ5VT03 806 aaPredicted RBP8.11□□□□□ -1.11
FAM49A-205ENST00000469507 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
FAM49A-205ENST00000469507 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
FAM49A-205ENST00000469507 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
FAM49A-205ENST00000469507 POTECB2RU33 542 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms